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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 189 |
| Cds size | 141 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2904.7917.1 >prot_H-paniculata_contig2904.7917.1 ID=prot_H-paniculata_contig2904.7917.1|Name=mRNA_H-paniculata_contig2904.7917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=47bp
MHSWFFLCEAAAQTVKLAEEQQQLSFPVFSGLRRRLGGVLVRKTKT* back to topmRNA from alignment at H-paniculata_contig2904:798..4568- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2904.7917.1 ID=mRNA_H-paniculata_contig2904.7917.1|Name=mRNA_H-paniculata_contig2904.7917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3771bp|location=Sequence derived from alignment at H-paniculata_contig2904:798..4568- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACAGATCACCCCGTTTTTTAAGTGCTCATGCATAGCTGGTTTTTCCTGT
GTGAAGCCGCAGCTCAAACCGTAAAATTGGCAGAGGAACAGCAACAACTC
TCTTTTCCCGTTTTTTCTGGACTCCGGAGGCGGCTCGGGGGGGTGCTGGT
TCGGTGGGTTCCGTTGGTAGGACCTCTTGATCCCTGTATCGGGTACTGTG
GACAATGACTTCTAGGTTGCTGTATTGCAAGATGACGTTCCTCAACTCGG
TTTTTGGTTCCCTGTCGACATGACCAGGAGAGGAGTGAACGTGGATGAAC
GCCGCTTGCAGGAGGTTCAATTGAATATCCATAAACCTTCGTGCGTGTCT
TATACAATACTACATCGTGTACAATCATCCCATCATGTCATAGCTCGCTT
CAACGCTTTTGCACAACTGTACGTACATTTCAATGAAGCCGGGTAAATTG
TCTGGATGTTACTGTACACTTTTCCTCCCGTCTAGCATTCTACGTTGAAC
GAAGGAAACCTGCCAACACATTGTCTCGCCCATCATACGGCCGCTACATT
ATTAATCTGCGACGTCTACCCACGCGATCGCTCATGTCCCCTTCAAATTT
CTGTCTATCTCTGCCGGAACTTGTTACACCTGTGATCCCCCCAACAAAAT
GTATACATCTGTCATGCTGTTGACTGCTGCATCCCACGCACCTTCACAGA
AACGTGCGTACTCAATGCTCTCCTCCGTGTCCATCTCCCACTCGCCGAGT
ACCGTCAGTACAGCAAAGTTGCACGGGTGGCCACTGGTACACCTTACAAG
ACATTATATGCATATACAGCCCGGGTTACGATGGTTTGATTGTACAACGT
CGAGTAATCTCCACGGCAACGTGCCTGCAGGCCACCTGTACGCAATGTAC
ATTGGAAAGGTCCTGCAAGTCACCTTGTGGTAGCATGTACCATACATCTG
ACAATGGCATCGGGGTGCCGTTTCAATACTTTAATGATTTGTATTTGTGT
ATGATTTGTAGACTCTGGACATTGAGGTTTAGCACATTTAGCATATATAT
AAAATGCGAAACGCATTCCTAACCCAGGCAGTCGTCATACCTCTGATGAT
GTTGGATTGATCTCAATGCGAGGGCAGAGAAAGACGACAGTTACTGGTCG
TCGTCTTGAAAATTGTTTGGGTAGAGAAGTATTCAAGAAACTTTTTCTTC
GGCTTTTTTTTTTTTTTCTTCCAGAAGTGTAGAAAAAGCGGCCCAAACGT
ACTTTCGGTAACCCAAATATATCTGGGATATGTACGTTGTGCAACAAGAG
ACGTTGCGCACTTTTACGTTACATAACATCTGAGGTTATGAAGTACGAAT
AACCTAGATGAAACGCACACGTTACTCAACGTCGCCATACAACGTATACC
AGTGACCATCCGTGTGCAACTGCGGTGACACGTGTTTCGTCTCTTTCATG
TACCCCTACCTTGAGGCACTTCCTAAGGGACATGAAAATTTTTGAAAAAG
TGGATATTTTAAATGATCTAACTGAAAAATCCGTTTGACCACTTCTTTAC
GAGGGGAAAAAAGTGGATATTCTGGGGGGGGGGAAATGTAATGATCCAAT
TTGGATTTTCGTAGCTTGGATAATTCTAATTTGAAGAACATAACTCAAAG
CACTAGCGGCATAGTCAGAAAAGACCGCAGTATCTATGTGCTTTTGCAAG
AATACAGACAGTGAGTTGCAACAGGCCACCCCTGCCACACCTCACACACA
AGCTACCCTTGTCGCAGTACACACACACCCTACCGTGATGATGCTAGTTA
CTGAGGATGTGTTCAATTGGTCCGACGACGAAGATGAGATGTTGCTTGCT
GTGTGTGAAGCAGTCACAAACCTGGTGCAGGTCATGCACCCAGCTGCACA
GCCCACTTCATTATAGAGCCCGGTTCGATCGGCAGTTCGTTTTCAAACTG
GGGTTCATCACCTGTTATGACATCTGGCAATGTTGACCGCTGACCTCTAT
CTCGTTTGCTAACTACAGCCGGCATTTTCTCCGCGCTTCGCAAAACTGAG
GATATGACTGTATTCTGTTCTCCTCGCAGCAGCTACAGCTTGTCCAAGTT
TCGAGCACCTTCAAAAATCACAGTTTCCCATAAGAAGTGGTTCTTGGATG
TTTGAATTGGATATAGGTGACAGAATGGAGGAGCTTCACTCCTCAAAACC
AACGGTGCAGCTGCAGCCAACAACGCGGATAGTCATAATCCAGAATTCGG
ACAAGACCAGATCATCTACAGCCAACGCCAGATTCAGTACAATGAAACGC
TGCCAATATCCGTATAGCGCTCTTCGCAGTCCAGTACCAACCTACGATTG
TTGGGCTATTCTCCGTACCCGAATCTAAGAATCCACATGGGAAAACTACC
CCATAATATCGGACACGTTTAGCAATAGAAGACAATGTGCTATAGTAGGG
TGTTCTTTGTTGGCCTATTTGCTGCTGCCTTGGACTGCTATCGCTTCACA
GAACAGCTGGTGCACTCCAACCCACAGTGCTTTAGTATGATGCTCCAAAG
CTACGGTGCACTGTAGAGACAGTATAATTGTGCTTAATTCTTAACATTGA
CCATGCATAGCATTAGCTTAGCAGTGATATAGCAGCCTTTGTGCTTCGCG
CCCACCCTGTGTGTGCAAGCAGGGAATGATTCCAACACGTCCTTGTCAAA
TCCCCAGTTAATGTATGAAGGCTTCGAGGACGTGCAGAAGGGGATGAAGA
GGGATTACATGACGACTTACGGGACGTGAGTGTATGGGATGGGTTGTGGA
ATGCCATGGAAGGTTTTAATCACTGTAAAACGGAATGTAAAGATACATTC
GGAACAAGGACAAACAAAGCGTCAGGCAATTTCTTAAGGCACCACTTATG
GCAAAAAGCGATATTTGCAAAAATAATCTAAACCCACCCCGCAGAACACG
CCATGATTCATCCACTGTTACTGGCACAATGTGTCAACGACGACCACGAA
ATTTGGTCTGTTGCTGTACTGCAGCACTGCTGCTGTGAGCGAGCACGCTG
TGGGGCTGTCTGTTGTGTGCGAAGGGGCTATCTGTATCACAAATGCTAGT
GCAATCAGTCATGCTCTGTCAGTCCAAAAAATGAAACCGTTCCAAAATGC
GCATTGAGTTATTAACAAAAATAGTAGGCCGTGGAGTTCGATTTTGGGCT
CGTGAGATAAAAAAAAATCGAAGGCAAAACCTCCCACAAGAAGTGGTTTC
GAGTATTACATAATTGATTTTTTAAAAAACTCTAATATCAATTTGAAGAA
TCCAACTGCCACAAGAAACGGCGTCAACGAAATCGGAAAACGCAACGTTC
TCTTGATGCGCGAAGTGCTGCAGCGCGTGCCGCGTCAGCAACAAGGCATG
GTAGGGTAGCACAGTCAGATCAGGCACGGTATTGGCCCCAAAGAAACGCA
CAAGGTAGGATCCGGCGCGGTAGTACCGTGCGCGAAAATATTTGGTAGCG
CGTACCGCCGGAAAAAATTCCACGGCCAATACCAACCGTGTTGCACAGTA
GCTGCATACCGCACGAAATTAAGTCCCTTGATAAACGTGGGTGTGACTGC
AGCGTATGGACTCGTCGCGAGGTAGAAATCGCTACTCCACGGGAGATATT
GAGAGGGCAAGCGAGCAGTAGGGAAAAAAATTATGATGTTCTCCCTCGCT
CTTTTTCCGATACCCTTCACGTGTTCATCCCACAGGAAGACAAAAACCTG
AACGACGAGATGCTGTCCGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2904:798..4568- >mRNA_H-paniculata_contig2904.7917.1 ID=mRNA_H-paniculata_contig2904.7917.1|Name=mRNA_H-paniculata_contig2904.7917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=282bp|location=Sequence derived from alignment at H-paniculata_contig2904:798..4568- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCATAGCTGGTTTTTCCTGTGTGAAGCCGCAGCTCAAACCGTAAAATT
GGCAGAGGAACAGCAACAACTCTCTTTTCCCGTTTTTTCTGGACTCCGGA
GGCGGCTCGGGGGGGTGCTGGTTCGATGCATAGCTGGTTTTTCCTGTGTG
AAGCCGCAGCTCAAACCGTAAAATTGGCAGAGGAACAGCAACAACTCTCT
TTTCCCGTTTTTTCTGGACTCCGGAGGCGGCTCGGGGGGGTGCTGGTTCG
GAAGACAAAAACCTGAGAAGACAAAAACCTGA back to top
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