mRNA_H-paniculata_contig2903.7915.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Match: A0A6H5KK48_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KK48_9PHAE) HSP 1 Score: 815 bits (2106), Expect = 3.870e-285 Identity = 480/759 (63.24%), Postives = 551/759 (72.60%), Query Frame = 1
Query: 1 LSRGLIAITGETGAGKSLISSAFSLAAGARVRGTDLVGPNRSTAQVLLDLELGEEHRRLTEKVLSRVGVPIVDGGRRLSVTRTIGGKGASASVNGCAVRVGTLRELMSPLIYTVDANAFELFSRADGRLRTLDRMLTPSELVLADKVRRVVGELKQAEARRTRLEQRCRFEGGPGGE-EDTSLLHHWVEELDEFREEEVAFMAKLRSVVDAFVADWGEAMLGPLAEPLLSTTGTETSSGASXXXXXXXRGGVSEEEGLSELWPRLSRIREGMEDVEVSRTKVELARQTAVDRSNPESVAHALSKIRDLLIDAENEDVGLSQELLEATHEDLNSLEDCLERAGDKLSRSVESLPVLPISLEEVESRIIKWRDLARKHGVSPEALGSMQSQLRVELDELVIAAEALPLARETEKSWRDLAEQLAGDLSATRRRSAEEVEDLINPMMGNVGLEGANVKVVVEESKTLGPTGSDKIQFILEANEGQTRGAVDAIASSGEKSRLLLLLETRILSSQQLDRRSSADEGAGFAG--GRIAAGVD--GDAFGRSDDEPRIGESVRRVAPCAVLYDEIDAHVGGRTAVAVGRLLANQGRHSQVIVVTHTASVAALADQHLVVDKKRVSLSSSASYSITKGDFTAAATSEASGSNPSANDNGSD----------------------------------DGDIASSTMASWRSHRSDDPASGGGSGISVAIREVREGDREREVARMAAGNIGGGAADELARAMLRCSRRQ 2160
L RGL+A+TGETG GKSLISSAFSLAAGARVRG DLVG STA V L LEL E HR T +VL R GVP+ DGGRRL V RT+GGKG+SASVNGC+V++G LRELMSPLIYTVDANAFELFSRADGR+R LDRM TP+E+ LADK R VV +LKQAEARR RLEQRCRFEGGPGG +D SLLHHWVEELDEFRE E+AFM ++RS+V+ FV DWGE +LGPLAEP LS T RGGV EGLS+LWPRLSR+REGMED+E SRTKVELARQ AV++SNP+S+AHA+ KIR LLIDAE+E+VGLSQ+LLE THEDLNSL+D ++ G+KL RSVESLPVLPI+LEEVE R +KWRDLARKHGV PE LGSMQ+QLRVELDELV+AAEALPLARE E+ WR AE+ AG+LSA RRR+A EVE L+NPMM +VGLEGA KV+VEESK LGP+G+D++QF++EANEGQTRG VDA+ASSGEKSRLLLLLET + Q D G G A GVD G+A G + G V RV PCAVLYDEIDAHVGGRTAVAVGRLLANQGR SQV+VVTHTASVAALADQHLVVDK +++ S K D + + S DG S+ ++ R R G G+SV+IREV +RE E+ARMAAG++GGGAA ELAR MLR SRRQ
Sbjct: 170 LGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLEDGGRRLRVYRTVGGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRMRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGPGGSADDASLLHHWVEELDEFREGEMAFMDRMRSIVERFVDDWGEDILGPLAEPFLSGTLLSDKDAEEGL-----RGGV---EGLSDLWPRLSRVREGMEDLEASRTKVELARQLAVEQSNPDSIAHAIVKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLDDLVKSVGEKLERSVESLPVLPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKEERWRAAAEEAAGELSAVRRRAALEVEQLVNPMMADVGLEGATFKVLVEESKALGPSGADRVQFLIEANEGQTRGTVDAVASSGEKSRLLLLLETLLPPPQARSTAKVGDRRGVVVGEEGVTAEGVDADGEAAGTAAGG---GGGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDKALTD-TTAVMASAGKDDIRSISGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGVDEPSSSSARRPRRQGK----GRGGVSVSIREVNGREREEELARMAAGDMGGGAAAELAREMLRYSRRQ 912
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Match: B8C1M4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1M4_THAPS) HSP 1 Score: 190 bits (482), Expect = 3.120e-47 Identity = 195/672 (29.02%), Postives = 304/672 (45.24%), Query Frame = 1
Query: 16 IAITGETGAGKSLISSAFSLAAGARVRGTDLVGPNRSTAQVLLDL-ELGEEHRRLTEKV---LSRVGV-PIVDGGRRLSVT------RTI-----GGKGASASVNGCAVRVGTLRELMSPLIYTVDANAFEL-FSRADGRLRTLDRMLTPSELVLADKVRRVVGELKQAEARRTRLEQRCRFEGGPGG-----------EEDTSLLHHWVEELDEFREEEVAFMAKLRSVVDAFVADWGEAMLGPLAEPLLSTTGTETSSGASXXXXXXXRGGVSEEEGLSELWPRLSRIREGMEDVEVSRTKVELARQTAVDRSNPESVAHALSKIRDLLIDAENEDVGLSQELLEATHEDLNSLEDCLE---RAGDKLSRSV----ESLPVLPISLEEVESRIIKWRDLARKHGVSPEALGSMQSQLRVELDELVIAAEALPLARETEKSWRDLAEQLAGDLSATRRRSAEEVEDLINPMMGNVGLEGANVKVVVE------ESKTLGP--TGSDKIQFIL---------EANEGQTRGAVDAIASSGEKSRLLLLLETRILSSQQLDRRSSADEGAGFAGGRIAAGVDGDAFGRSDDEPRIGESVRRVAPCAVLYDEIDAHVGGRTAVAVGRLLANQGRH---------------SQVIVVTHTASVAALADQHLVVDK 1830
IA+TGE+G+GKSL+ S + DLV ++ A ++ L E GE+ R E + L R G+ P + + ++T RT+ G + +NG + + +LR + +PL VD A +R RL +D + S L + K+A +R RL+ P E+ T LL HWV+EL++F F DA + + E M+ E + ++ + G SE+ + L+ + RE ++ VE A ++ S+PES A AL K+R LL ++ G + +E TH+ LN +E L R+ D S SV E + IS+EE+++ + W LARKHG+SP AL LR ELD V A LP A + E+ +LS R A + + ++ ++ ++GLEG + +V ++ E G G D + F+L + +E Q G ++ + SSGEKSR+LL +ET + S G +A+ S D + +S + P ++YDEIDAHVGGR AV + +LLA+Q R SQ+I +TH+ASVAA+AD+H+VV++
Sbjct: 128 IAVTGESGSGKSLLVS----------KAVDLVTGGKAVATLVPTLGEGGEDERSSVEMISSSLERFGIDPTILSNDQSTMTNQLHLQRTLQWSDTGRLKSICRINGKHISLKSLRHIAAPLFTRVDVGAAATALARPASRLAMIDMGVEDS---LKQNCLEMRESYKRARKKRMRLKSELESRVLPSSMQGSGYTSTSEEDQTELLGHWVDELEKFETRTNLFR-------DALLGQYNELMMDQYNEHDNKKSSGLLNTLQNFKKTTWGGGNASED---NSLFATILEFREEIKAVESQLASAHAAYESLASLSSPESAAVALEKVRKLLYSISRDNSGPLFDSIETTHDLLNEVESSLNECARSIDGDSNSVISTLEQMICNGISIEEIDNIVADWNSLARKHGISPYALPKCHESLRQELDGNVEALLLLPEAEKEERVALKNFSLACKELSDARNVVATNLSEAVSQILPSLGLEGTSFQVQLKQRQGGFEDPYFGADNVGVDLVDFLLLHQKSNTGGQIDESQRGGNIEQVGSSGEKSRVLLAIETALPGS---------------------IGSTCNAYSNSADNVQT-DSSPKAQPICIIYDEIDAHVGGRAAVTMAKLLADQTRKAPDLADIDTATMERGSQIIAITHSASVAAIADKHIVVER 754
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Match: A0A1Z5K9M0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9M0_FISSO) HSP 1 Score: 176 bits (446), Expect = 9.940e-43 Identity = 183/662 (27.64%), Postives = 291/662 (43.96%), Query Frame = 1
Query: 10 GLIAITGETGAGKSL-ISSAFSLAAGARVRGTDLVGPNRST-------AQVLLDLELGEEHRRLTEKVLSRVGVPIVDGG----RRLSVTRTIGGKGASASVNGCAVRVGTLRELMSPLIYTVDAN-AFELFSRADGRLRTLDRMLTPSELVLADKVRRVVGELKQAEARRTRLEQRCRFEGGPG------GEEDTSLLHHWVEELDEFREEEVAF-------MAKLRSVVDAFV----ADWGEAMLGPLAEPLLSTTGTETSSGASXXXXXXXRGGVSEEEGLSELWPRLSRIREGMEDVEVSRTKVELARQTAVDR----SNPESVAHALSKIRDLLIDAENE-DVGLS-----QELLEATHEDLNSLEDCLERAGD-------KLSRSVESLPV-LPISLEEVESRIIKWRDLARKHGVSPEALGSMQSQLRVELDELVIAAEALPLARETEKSWRDLAEQLAGDLSATRRRSAEEVEDLINPMMGNVGLEGANVKVVVEESKTLGPTGSDKIQFIL------EANEGQTRGAVDAIASSGEKSRLLLLLETRILSSQQLDRRSSADEGAGFAGGRIAAGVDGDAFGRSDDEPRIGESVRRVAPCAVLYDEIDAHVGGRTAVAVGRLLANQGRHSQVIVVTHTASVAALADQHLVVDKK 1833
G+ AITGETG+GKSL ++ A + G + T L+G S V L+L L + + + L +GV + G RR V + + +N V + L ++ VDA+ A S+ + RL +D ++P+ L + RR + +QA +R +E+ + P +E+ L++HW+ EL FR+ F + ++ V DA + +DW G + E L+ DV VS + +A Q A D S+ +S A+ K R ++D+ D G + Q+ E +HE LN++E L L R++E L P SLEE++S ++ W LARKHG+ P +L + L+ E D V A + LP A E E++ +A L+ R++ A+E+ + + VG+E + + P D ++F+L + + G ++ IASSGEK+R+LL +E + G +AA A R E + + P A++YDEIDAHVGGR AVA+G +L Q + SQVI +TH+AS+AA AD H+VV ++
Sbjct: 96 GMTAITGETGSGKSLFVARALEVVTGGKGISTALLGSKNSEDVKVGEPVVVELELNLCGHYLKAAKSFLETIGVDVPSTGMMVLRRSLVVQQGRRVKSICHINNQQVTLKALTAFSRSMVTVVDASTAAAALSKPEARLAIIDSAVSPNLLSEVNDARR---QYRQARRKREAIERELKKRVLPSTFVQSDDDENVELMNHWIRELGVFRDRVQVFRERVARSIEQINEVHDAILRFAESDWDNDDEGAMFEALMD-----------------------------------------FRDVIVSLDEQLVAAQNARDALAALSSDQSAITAIEKTRSFIMDSLGSGDHGKASTRSLQKATERSHELLNAVEYALHACSKFMEDDEKGLIRTIEYLRENCPFSLEEIDSLLLDWSSLARKHGIIPSSLPTCHRSLKNERDGNVNARQLLPAAVEDEEAKLSSFLNVASKLTLERKQVADELTSSVTSRLPLVGMERSIFTASITPRGDA-PNSDDTVEFLLLHRNADDEKKAADGGRMNEIASSGEKARILLCVECELP-------------------GSVAASY---AVARVKKEDETEAELVGLPPIAIVYDEIDAHVGGRAAVAMGSMLVEQSKWSQVIAITHSASIAAAADSHIVVQRE 690
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Match: A0A1Z5JGS5_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGS5_FISSO) HSP 1 Score: 172 bits (435), Expect = 2.340e-41 Identity = 176/647 (27.20%), Postives = 295/647 (45.60%), Query Frame = 1
Query: 10 GLIAITGETGAGKSL-ISSAFSLAAGAR-VRGTDLVGPNRSTAQVL------LDLELGEEHRRLTEKVLSRVGVPIVDGGR---RLSVTRTIGGKGASAS-VNGCAVRVGTLRELMSPLIYTVDAN-AFELFSRADGRLRTLDRMLTPSELVLADKVRRVVGELKQAEARRTRLEQRCRFEGGPGG------EEDTSLLHHWVEELDEFREEEVAFMAKLRSVVDAFVADWGEAMLGPLAEPLLSTTGTETSSGASXXXXXXXRGGVSEEEGLSELWPRLSRIREGMEDVEVSRTKVELARQTAVDRSNPESVAHALSKIRDLLIDAENE-DVGLS-----QELLEATHEDLNSLEDCLERAGD-------KLSRSVESLPV-LPISLEEVESRIIKWRDLARKHGVSPEALGSMQSQLRVELDELVIAAEALPLARETEKSWRDLAEQLAGDLSATRRRSAEEVEDLINPMMGNVGLEGANVKVVVEESKTLGPTGSDKIQFIL------EANEGQTRGAVDAIASSGEKSRLLLLLETRILSSQQLDRRSSADEGAGFAGGRIAAGVDGDAFGRSDDEPRIGESVRRVAPCAVLYDEIDAHVGGRTAVAVGRLLANQGRHSQVIVVTHTASVAALADQHLVVDKK 1833
G+ AITGETG+GKSL ++ A + G + + L G N A+V L+L L + + L + V + G R S+ G + S +N V + L L+ VDA+ A S+ + RL +D ++P LV ++ +R + +QA +R +E+ + P +E+ L++HW+ EL F++ F ++ + ++ + + + +L ++ + ++EG ++ R+ + ++ + AR S+ +S A+ K R ++D+ D G + Q+ E +HE LN++E+ L L R++ESL P SLEEV+S +I W LARKHG+ P +L + L+ E D V A + LP A E++ +A L+ R++ A+E+ + + VG+E + + P D I F+L + + G ++ IASSGEK+R+LL +E + G +AA A R+ E + + P A++YDEIDAHVGGR AVA+G +L Q + SQVI +TH+AS+AA AD H+VV ++
Sbjct: 79 GMTAITGETGSGKSLFVARALEVVTGGKGISAALLGGKNSERAKVEEPVVVELELSLRGHYLNAAKSFLKTIEVDVPSTGLILLRRSLVMQQGRRVKSVCHINNQQVTLKALTAFSRSLVTVVDASTAAAALSKPEARLAIIDSAVSPDLLVEVNEAKR---QYRQARRKREAIERELKKRVLPSSFVQSDDDENVELMNHWIRELGVFQDRVELFRGRVATSIE---------QMTEVHDAILRFAESDWDN---------------DDEGA--MYESFMDFRDMIVSLDEQLVAAQNARDALAALSSDQSAITAIEKTRSFIMDSLGSGDHGKASTRSLQKATERSHELLNAVENALHACSKFIEDDEKGLIRTIESLRENCPFSLEEVDSLLIDWSSLARKHGIIPSSLPTCHKSLKNERDGNVNAQQLLPAAIAEEQAKLSTFLCVASKLTLERQQVADELTSSVTSRLPLVGMERSIFTASITPRGDT-PNSDDTIDFLLLHRYADDEKKAADGGKMNEIASSGEKARILLCVECELP-------------------GSVAASY---AVERAKKEDETEAELVGLPPIAIVYDEIDAHVGGRAAVAMGSMLVEQSKWSQVIAITHSASIAAAADSHIVVQRE 673
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Match: A0A7S3DWW3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DWW3_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.910e-41 Identity = 192/722 (26.59%), Postives = 318/722 (44.04%), Query Frame = 1
Query: 223 GRRLSVTRT------IGGKGASAS-VNGCAVRVGTLRELMSPLIYTVDANAF-ELFSRADGRLRTLDRMLTPSE--LVLADKVRRVVGELKQAEARRTRLEQRCRFEGG------PGGEEDTSLLHHWVEELDEFREEEVAFMAKLRSVVDAF-----VADW------------GEAMLGPLAEPLLSTTGTETSSGASXXXXXXXRGGVSEEEGLSELWPRLSRIREGMEDVEVSRTKVELARQTAVDRSNPESVAHALSKIRDLLIDAENEDVGLSQELLEAT---HEDLNSLEDCLERAGDKLSRSVES--LPVL-------PISLEEVESRIIKWRDLARKHGVSPEALGSMQSQLRVELDELVIAAEALPLARETEKSWRDLAEQLAGDLSATRRRSAEEVE-DLINPMMGNVGLEGANVKVVV----EESKTLGPTGSDKIQFILEANE------------------GQTRGAVDAIASSGEKSRLLLLLETRILSSQQLDRRSSADEGAGFAGGRIAAGVDGDAFGRSDDEPRIGESVRRVA---PCAVLYDEIDAHVGGRTAVAVGRLLANQGRHSQVIVVTHTASVAALADQHLVVDKKRVSLSSSASYSITKGDFTAAATSEASGSNPSANDNGSDDGDIASSTMASWRSHRSDDPASGGGSGISVAIREVREGDREREVARMAAGNIGGGAADELARAMLRCSRRQEHMVN 2175
GRR S T +GG+ S +N AV + L+ + +PL+ VDA A + SR RL LD L + L + R E +Q R LE+ + G++D + L HW++ELD F E ++ +V +F + +W G ++L + L + + +S + + +E S+L+ L + ++D++ AR++ V S+P S A+ + R LL+D N D LS + EA H LN L++ L L + L +L PI+LEE+ + +W LARKHG+SP L S LR ELD + A LP A + E + ++ +LS R A+++ D+ ++ ++G+ + + +V + ++T G D++ F L N+ GQ G ++++ASSGE++R+LL +E I S + + G + ++ +DD+ R G +V P AV+YDEIDAHVGGR +VAV +L +Q + QV+ +TH+ SVAA A H+ V K+ +FT+A + D + A+ T ++ SG + R VR DR +E+ RMA+G++ A A A++R + +++ N
Sbjct: 65 GRRTSKTTKNPNSPGVGGRLKSTCFINHHAVPLKALKAIGAPLLTLVDAPAAAQTLSRPPSRLAILDTALLQNGHGYHLLQRTRLCQNEYQQCRQARHDLERALQQHESFLPASVTAGQQDLTHLQHWIDELDVFEE-------RVTKLVQSFGTGSELQNWDHDGEYEEEEEYGHSVLVTILNDLSQLSWMDHASDNTSPAPSLQK---QQESSSSKLYHGLLDLSSHLKDLDQQMDTARQARESLVSLSSPTSAKTAVEQTRQLLMDL-NRDSDLSSQATEAAEQVHSLLNELDNVLSECSQSLDDDNDQGLLSILKQERSSCPITLEELSEFVTEWNILARKHGISPHLLPSCHMSLRCELDGNLEAQTLLPQALKAEAAALQQLQESCDELSQARMLVAQQLSVDVTQRLVSSLGMRQSTFQAIVRPVKDVTRTSATVGVDEVDFYLFHNDNNSGNTATSRMKQNAKKAGQRGGKLESVASSGERARILLAIECSIPGSIRA-----------LSNGGVTLPLEQTL---TDDDSREGSAVLNAPTTLPVAVIYDEIDAHVGGRASVAVAEMLTDQSKFCQVVSITHSPSVAATAGTHICVQKEESE----------SENFTSALS----------------DNEHATDTFST--------------SGSPLRARLVRGSDRLQELGRMASGDLATQEAKTFAEALIRHANQRKKQKN 721
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Match: A0A7S2PIS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PIS7_9STRA) HSP 1 Score: 171 bits (433), Expect = 4.830e-41 Identity = 188/676 (27.81%), Postives = 291/676 (43.05%), Query Frame = 1
Query: 13 LIAITGETGAGKSL-ISSAFSLAAGARVRGTDLVGPNRSTAQVLLDLELGEEHRRLTEKVLSRVGV-PIV---------------------DGGRRLSVTRTIGGKGASASV---NGCAVRVGTLRELMSPLIYTVDAN-AFELFSRADGRLRTLD--------RMLTPSELVLADKVRRVVGELKQAEARRTRLEQRCRFEGGPGGEEDTSLLHHWVEELDEFREEEVAFMAKLRSVVDAFVADWGEAMLGPLAEPLLSTTGTETSSGASXXXXXXXRGGVSEEEGLSELWPRLSRIREGMEDVEVSRTKVELARQTAVDRSNPESVAHALSKIRDLLIDAENEDVGLSQELLEATHEDLN----SLEDC---LERAGDKLSRSVESLPVLPISLEEVESRIIKWRDLARKHGVSPEALGSMQSQLRVELDELVIAAEALPLARETEKSWRDLAEQLAGDLSATRRRSAEEVEDLINPMMGNVGLEGANVKVVVEE----------SKTLGPTGSDKIQFILEANEGQTR----GAVDAIASSGEKSRLLLLLETRILSSQQLDRRSSADEGAGFAGGRIAAGVDGDAFGRSDDEPRIGESVRRVAPCAVLYDEIDAHVGGRTAVAVGRLLANQGRH------SQVIVVTHTASVAALADQHLVVDKKRVSLSSS 1854
L+ +TGE+G+GKSL +S A + G + T LV + + L + L E H L G+ P++ G L T G G S+ N V + TLRE+ SPL TVD A +RA RL LD + S V + +R K+ E+R + G +E LL HWV+ELD F F + +AD GP + ++ST G ++++ + L + RE ++ VE A + + ES A +L ++R LL ++D G E +E THE LN SL +C ++ + + ++E+ +S+EEV+ + W LARKHG+SP AL + + LR E+D V A + LP A E E+ + +LS R A + + ++ ++GLE + + S+TLG D + F + N G G ++ + SSGEKSR+LL +ET + S + + + G +P +++YDEIDAHVGGR AV + +LLA+Q +Q+I +TH+ASVAA+AD+H+V+++ S SSS
Sbjct: 114 LVCVTGESGSGKSLLVSKALDVVTGGKATNT-LVQDQDKESWIELIVRLCEPHLSTVSSTLQHFGIDPLILYHQHTEDTTDVGDHNNEHASVGYLHLQRTLVAGSSGKLKSICRINEKHVSLKTLREIASPLFTTVDVGVASGALARAASRLAMLDIGVEDSLKQQCIQSRDVFKEATKRRKKIKKELESRILPSSMQGNAYGSELEQEQIELLEHWVDELDMFEARVNRFQETIYEQYSELIADGN----GPGSNNIISTL---------QKFRECVWGEHNDDD--DSILANLLQFREDIKAVESQLIAANAAYEGLASLTATESAAVSLERVRKLLYTISSDDSGPMFEKVERTHELLNIVEESLNECARSIDGGSNSIISTLENARSTGVSMEEVDGLVADWNALARKHGISPYALPTCHTSLRQEIDGNVEALKLLPEAEEDERVAFEDYTHACEELSYAREIVASNLSRSVTELLPSLGLECTFQVQLTQRPGGFEDPYCGSETLGVDVVDLLLFHNKVNGGPNESKRGGKIEQVGSSGEKSRVLLAIETCLPGSIGATCNNCSPQHVIQNGN---------------------------SPISIVYDEIDAHVGGRAAVTIAKLLADQSSGEASRAGNQIIAITHSASVAAIADRHIVIERGSNSGSSS 746
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Match: B7G2S7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2S7_PHATC) HSP 1 Score: 160 bits (406), Expect = 2.000e-37 Identity = 197/678 (29.06%), Postives = 294/678 (43.36%), Query Frame = 1
Query: 13 LIAITGETGAGKSL-ISSAFSLAAGARVRGTDLVG---PNRS--------TAQVLLDLELGEEHRRLTEKVLSRVGVP--------------IVDGGRRLSVTRTIGGKG-----ASASVNGCAVRVGTLRELMSPLIYTVDAN-AFELFSRADGRLRTLDRMLTPSELVLADKVRRVVGELKQAEARRTR--LEQRCRFEGGPGGE-----EDTSLLHHWVEELDEFREEEVAFMAKLRSVVDAFVADWGEAMLGPLAEPLLSTTGTETSSGASXXXXXXXRGGVSEEEGLSELWPRLSRIREGMEDVEVSRTKVELARQTAVDRSNPESVAHALSKIRDLLIDAENEDVGLSQELLEA---THEDLNSLEDCLERAG-----DKLSRSVESLPVLPISLEEVESRIIKWRDLARKHGVSPEALGSMQSQLRVELDELVIAAEALPLARETEK----SWRDLAEQLAGDLSATRRRSAEEVEDLINPMMGNVGLEGANVKVVVEESK---------TLGPTGSDKIQFIL-----EANEGQT--------RGAVDAIASSGEKSRLLLLLETRILSSQQLDRRSSADEGAGFAGGRIAAGVDGDAFGRSDDEPRIGESVRRVAPCAVLYDEIDAHVGGRTAVAVGRLLANQG-RHSQVIVVTHTASVAALADQHLVV 1824
L+A+TGETG+GKSL + +L G + LV P+ T V +DL L + H T+ L R+GV I+ R L+ + + ++ S+NG +V + L + PL+ TVDA A + + LD + P K + K RR R LE P D LL HW++E+D F ++F + D+ G A+ AE L + T E S S L+ + +R+ + D + A +T S ES +L + R LL DA + + ++ +A +HE LNS+E L + L+R E P S+E V+ +++W LARKHG++P L S L+ E + V A + LP + E E S+RD E L + RRR AE + +++ + +G+EG ++V V E + T G++++ F L AN T R + ASSGEK+R+LL +E + S GA G A GD SDD+ + + + +P AV+YDEIDAHVGG AVAV +LA Q + SQV +TH+ASVAA AD H+V+
Sbjct: 117 LVAVTGETGSGKSLLVGKVVNLLCGGKAT-PSLVATFEPHEDSTLYSGGVTTVVEMDLLLTDPHLGATKATLERLGVNSSLLFSAATNSSCGILCLRRSLATSLATSERAKLRLKSACSINGQSVTLKALATVAGPLLATVDAGIAANALVKTTSLMAILDTAVKPQV-----KTYMTQSKAKYRVCRREREVLEAELASRVLPTSYTSDSLNDVELLTHWIDEIDAFESRVMSFCKFASGLQDSN----GSALETARAE-LATATWMENGSRRPNIFS-------------SRLYDCIVMLRDAIRDADNQIVAAYDAIETLSSMSRSESTMSSLERARKLLFDAAQSEESPNSKISQAAEESHELLNSVESTLLNCSRFMESNFLNRLEECRQTCPCSVEAVDGLLLEWNTLARKHGIAPTTLPSCHKALQNERNGNVEALQLLPASIEQEAQAFVSFRDACELL----TIERRRVAERLSEVVTDRLPCLGMEGMALQVEVSEVRRCDEPSAYGTGSVLGTNEVDFWLVSALSSANATGTNANRVVPRRSPIHTTASSGEKARILLAIECALPGSI----------GAMIDGSASNAAAAGD---ESDDD--MEQRFSKQSPVAVIYDEIDAHVGGNAAVAVANMLAIQSSQSSQVFCITHSASVAATADLHIVI 751
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Match: K0S5J6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5J6_THAOC) HSP 1 Score: 157 bits (396), Expect = 2.230e-36 Identity = 184/655 (28.09%), Postives = 291/655 (44.43%), Query Frame = 1
Query: 13 LIAITGETGAGKSL-ISSAFSLAAGARVRGTDLVGPNRSTAQVLLDLELGEEHRRLTEKVLSRVGVPIV-------DGGRRLSVTRTI------GGKGASASVNGCAVRVGTLRELMSPLIYTVD-ANAFELFSRADGRLRTLDRMLTPSELVLADKVRRVVGELKQAEARRTRLE---------QRCRFEGGPGGEEDTSLLHHWVEELDEFREEEVAFMAKLRSVVDAFVADWGEAMLGPLAEPLLSTTGTETSSGASXXXXXXXRGGVSEEEGLSELWPRLSRIREGMEDVEVSRTKVELARQTAVDRSNPE--SVAHALSKIRDLLIDAENEDVGLSQELLEATHEDLNSLEDCLERAGDKLSRSVESLPVLP------ISLEEVESRIIKWRDLARKHGVSPEALGSMQSQLRVELDELVIAAEALPLARETEKSWRDLAEQLAGDLSATRRRSAEEVEDLINPMMGNVGLEGANVKVVVEESKT------LGPT--GSDKIQFILEANE--GQTRGA-------VDAIASSGEKSRLLLLLETRILSSQQLDRRSSADEGAGFAGGRIAAGVDGDAFGRSDDEPRIGESVRRVAPCAVLYDEIDAHVGGRTAVAVGRLLANQGRHSQVIVVTHTASVAALADQHLVVDK 1830
L+A+TGE+G GKSL +S LA GA+ + L + A+V + E H L G+ DGG + + RT+ G + S+NG V V TLREL + L VD A A + R RL LDR + P L++ +R + K A+ +R +E Q R E+ ++ HWV+ELD F ++ + V +A GE LG + L + + VSE+ +E + + I + + V+++++E ++ ++ S AL R +L + +D G E +E THE LN+ E +E + + +P+L I+++ +E I W L+RKHG++ E L LR ELD V A P A+E E+ R+ +LS R + + + ++ ++ ++GL+ + +++ ++ GP G D F+L G++ GA V+ + SSGEKSRLLL +E+ + S G I + V G D + P V+YDEIDAHVGGR A + LL Q + S +I +TH AS+AA ADQH+VV++
Sbjct: 77 LVAVTGESGTGKSLLVSKVLGLATGAKFSSSILSTSKPAVAEVSAIIH--EPHLSSFATSLEIHGIDSSEILCVDEDGGCEIHLRRTLIHNERSGRTTTTCSINGRNVSVKTLRELTAHLFTRVDVAVASQALGRPAARLTILDRGV-PEHLLIDCANKR--DDYKAAKRKRESIEGELKSRVLPQNIRGSKDDLDEDQIEMMRHWVDELDSFE-------LRVATFVQNTIAQDGE--LGVSLKMLRNASW------------------VSEQADTNEDFSLFNCILNLRDGLRVTQSQLESSQMAYESLASVRDFSAQIALENTRKILYEVCTDDRGQIFEAVERTHELLNAAEIAIEECARSIDGDL--IPILEKRAHTGINIDALEGLIGDWNGLSRKHGIASELLPKCHKTLREELDGDVKALNQWPKAKEDERRAREAYSASCAELSNARLAVSVTLTEKVSQLLPSLGLDRSTLEITLKHRSGGLADPYTGPESLGVDIADFVLLHRNVPGESDGASQAKGGNVEKVGSSGEKSRLLLAMESVLPGSI----------------GTICSNV-----GTIDVRMKSD-------PICVVYDEIDAHVGGRAATTMTELLREQRKSSHIIAITHAASLAAKADQHIVVER 669
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Match: A0A6U6F288_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6F288_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.420e-35 Identity = 190/728 (26.10%), Postives = 312/728 (42.86%), Query Frame = 1
Query: 13 LIAITGETGAGKSL-ISSAFSLAAGARVRGT-----DLVGPNRSTAQVLLDLELGEEHRRLTEKVLSRVGVP--IVDGGRRLS----------VTRTIG--------GKG---------------ASASVNGCAVRVGTLRELMSPLIYTVDANAF-ELFSRADGRLRTLDRMLTPSELVLADKVRRVVGELKQA-EARRTRLEQRCRFEGGPG-GEEDTS----LLHHWVEELDEFREEEVAFMAKLRSVVDAFVADWGEAMLGPLAEPLLSTTGTETSSGASXXXXXXXRGGVSEEEGLSELWPRLSRIREGMEDVEVSRTKVELARQTAVDRSNPESVAHALSKIRDLLIDAENEDV-----GLSQELLEAT---HEDLNSLEDCL--------ERAGDKLSRSVESLPVLPISLEEVESRIIKWRDLARKHGVSPEALGSMQSQLRVELDELVIAAEALPLARETEKSWRDLAEQLAGDLSATRRRSAEEVEDLINPMMGNVGLE---------GANVKVVVEESKTLGPT-GSDKIQFIL--------------EANEGQTRGAVDAIASSGEKSRLLLLLETRILSSQQLDRRSSADEGAGFAGGRIAAGVDGDAFGRSDDEPRIGE-SVRRVAPCAVLYDEIDAHVGGRTAVAVGRLLANQGRHS-----------QVIVVTHTASVAALADQHLVVDKKRVSLSSSASYSITKGDFTAAA 1896
L+A+TGETG GKSL + A +A G +V + D N S A V ++L+L + H +T +++ G+ +++ GRR S + RTI G+G + VNG V + LR + SPL+ VDA+A S+ RL +D+ ++ A + R + +Q EA + E + PG G+E T LL HWV+ELDEF E + + + + + LL ++ TE S + L +R ++ ++ E A + S+ +SV AL + R L DA + G Q +L++ HE LN +E L +R L++ + L +S+E++++ I W LARKH VSP L +R EL + E + A+ +E+ + +L+A R AE + + + ++G+E G+ +K + +G G D + F L + + G ++ I SSGEK+R+LL +E+ + S + GG +A + G SD + E ++R P A++YDEIDAH GGR +VAV +LLA+Q R Q++ +TH+ SVAA+AD+H+++ + L+ ++T AA
Sbjct: 143 LVAVTGETGTGKSLLVHKALEVAMGGKVSQSIVPSLDTTVGNESNATVEVELKLSQPHLDITRIIMAHHGIDPTLLENGRRSSQKNDTLPRLFLKRTISLQMKPHMQGEGLEKGERIKSPKPRLKSRCEVNGQVVTLKALRAIASPLVTLVDASAAASALSKPTSRLAIIDKGVSTRTKAAAWEAREKYRQARQVREALEMKAESKVLPASLPGYGDETTKEALDLLTHWVDELDEF-ERRIQGLQDVCMTATTYTCT---------VKSLLKSSWTEES------------------------YSNLLDLRGHIKALDAQIIAAESAVEALSSLSSSDSVVSALERARAFLFDATKSETDSRSDGDLQPVLDSAENAHELLNDVESALSSCVCCIEDRNRGLLAKLQQERGSLRLSIEDIDAIIADWNSLARKHSVSPFDLPLCHQSMRAELTDGDNYREEISKAKASEEVALQHFQHACDELTAARGEVAEMLSGSVMRYLPSLGMERSFFCAQLNGSVLKCTSASAFGIGSELGVDSVDFFLRHQLDAPAKCQSDEQVSPKSRGGRLEDIGSSGEKARILLAVESILSGSVKA-----------ACGGAVATEI-----GSSDAAQVVLEDAIRNCPPIAMIYDEIDAHCGGRASVAVAKLLASQARSDTPIVQSTQRSGQIVSITHSPSVAAIADRHIMIQIEPAQLAKENRQTVTVSTINGAA 820
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Match: A0A448Z6I2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6I2_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.830e-34 Identity = 193/680 (28.38%), Postives = 273/680 (40.15%), Query Frame = 1
Query: 265 ASASVNGCAVRVGTLRELMSPLIYTVDAN-AFELFSRADGRLRTLDRMLTPSE------LVLADKVRRVVGELKQAEARRTRLEQRCRFEGGPGGEEDTSLLHHWVEELDEFREEEVAFMAKLRSVVDAFVADWGEAMLGPLAEPLLST--TGTETSSGASXXXXXXXRGGVSEEEGLSELWPRLSRIREGMEDVEVSRTKVELARQTAVDRSNPESVAHALSKIRDLLIDAENED---------------------VGLSQELLEATHEDLNSLEDCLERAGDKLSRSVESLPVL--------PISLEEVESRIIKWRDLARKHGVSPEALGSMQSQLRVELDELVIAAEALPLARETEKSWRDLAEQLAGDLSATRRRSAEEVEDLINPMMGNVGLEGANVKV----VVEESKTLGPTGSDKIQFIL----EANEG------QTRGAVDAIASSGEKSRLLLLLETRILSSQQLDRRSSADEGAGFAGGRIAAGVDGDAFGRSDDEPRIGESVRRVAP-CAVLYDEIDAHVGGRTAVAVGRLLANQGRHSQVIVVTHTASVAALADQHLVVDKKRVSLSSSASYSITKGDFTAAATSEASGSNPSANDNGSDDGDIASSTMASWRSHRSDDPASGGGSGISVAIREVREGDREREVARMAAGNIGGGAADELARAMLR 2145
++ S+NG V + LR + +PL+ VDA A R RL +D L PS L A + R+ E + + + L EGG G E LL HW+EELD F ++ V + D AEP L+ E S G V L+ L + + ++ E AR S+ +S AL + R L++A + VG S E HE LN +ED L L + LP PI EE+ + +W LARKHGV P L LR E D + A LP AR E++ E+ L+ R ++ ++ + +G+E A + + E + T G+D++ F L EAN G Q G ++ +ASSGEK+R+LL +E I S + GF+ G G DGD DD+P V V P AV+YDEIDAHVGGR +++V R+L +Q QV+ +TH S+AA+AD HL V + + S R+ S GG VA VR +R RE+ARMA+G+ G A+ A A+LR
Sbjct: 432 SACSINGHPVTLRVLRAVAAPLVAVVDAPVAASALGREASRLAMVDAGLPPSVPAWVRGLQAAYRARKRHRESLERDLSQRVLPXSLEDEGGDGHLE---LLGHWIEELD-------GFARRITEVGGSLAMDSARRRA---AEPELARLLADLEALEWGSAEEAETGDGPV--------LYDTLLDLHAYLGALDARIGAAEHARDALASLSDGDSARAALERTRGFLVEAAGGNPQRGFGHNPHPPPAPGAAESRVGASSE---RAHELLNLVEDALLECSRDLDDDEKGLPAXLGAARRACPIGTEELSGYLAEWNVLARKHGVPPHRLPLCHEALRTERDGGIEAGRLLPEARAAERAALADLEEGCRVLTEARTAVCRKLSASVSRRLPRLGMEDARFEARLSPIDEPAYTSSRPGADEVGFYLLRDDEANGGSGSDAQQIGGRIETVASSGEKARILLAIECEISGSIGAAIGGXSAGATGFSSG----GXDGDV----DDKP-----VPTVPPPLAVIYDEIDAHVGGRASISVARMLYDQSEACQVVSITHGPSLAAMADTHLCVQR-----------------------------------------------VPSRRAGES------GGXCDVVAATPVRGEERIRELARMASGDTVGDEAEAFAEALLR 1021 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2903.7915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2903.7915.1 >prot_H-paniculata_contig2903.7915.1 ID=prot_H-paniculata_contig2903.7915.1|Name=mRNA_H-paniculata_contig2903.7915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=728bp LSRGLIAITGETGAGKSLISSAFSLAAGARVRGTDLVGPNRSTAQVLLDLback to top mRNA from alignment at H-paniculata_contig2903:5215..16979+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2903.7915.1 ID=mRNA_H-paniculata_contig2903.7915.1|Name=mRNA_H-paniculata_contig2903.7915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11765bp|location=Sequence derived from alignment at H-paniculata_contig2903:5215..16979+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2903:5215..16979+ >mRNA_H-paniculata_contig2903.7915.1 ID=mRNA_H-paniculata_contig2903.7915.1|Name=mRNA_H-paniculata_contig2903.7915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4368bp|location=Sequence derived from alignment at H-paniculata_contig2903:5215..16979+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |