mRNA_H-paniculata_contig2902.7914.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2902.7914.1
Unique NamemRNA_H-paniculata_contig2902.7914.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2902.7914.1 vs. uniprot
Match: D8LI19_ECTSI (Circadian RNA-binding protein CHLAMY 1 subunit C1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI19_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 1.480e-106
Identity = 180/283 (63.60%), Postives = 208/283 (73.50%), Query Frame = 1 
Query:  760 MDHKVIKKWVENVASRKTKATASQIHRYFKGRVDPDVIDSYLEAFNNNYRDTVIQCAEFLNIFVQPEEEVVASAEPVEDVNDDLVGGAFAAKERNRIGDFDFAEHPLERRANEAYSNDCKDLKLLQAILDEARGQPGLAPTRKMVSKMVKRIKASQEELKKIRQDHKRQDSKKEIPQALHPAYAGNKPAFTSFQPPTIAADKEPDAMVDIPPNVVGWVIGKAGVRINEIQQRTNAAMWMDQNFPAGEMRKLHIHGNKTQVDAAIKEVEFLMNSAPVNNARPGK 1608
            MDH VIK WV  VASR+  AT+ +I RYF GRVD DVID Y E F+N+ R TVIQCAEFLNI V PE+E     E  +D+N +LV GAF AKER + GD+   EHPLERRANEA  NDCKDL +L AIL EA G+ GL   +KM+ KM+KRI  ++EE K++R     +  ++   Q LHPAYA  KP F+SF P TI  DK PDAM+DIPPNVVGWVIGK G RIN+IQ +TNAAMWMDQNFP G MRKLHIHGNK QV+AAI EVEFLM SAPVN  RPGK
Sbjct:    1 MDHSVIKNWVLEVASRRVLATSDEIKRYFHGRVDEDVIDFYNEEFSNS-RATVIQCAEFLNIEVPPEDE-----EEEDDINSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMIKRINETREEQKQLRTQSLLKPKREVSSQKLHPAYASKKPTFSSFAPSTIP-DKVPDAMLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQQVEAAIDEVEFLMKSAPVNTPRPGK 276
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BLAST of mRNA_H-paniculata_contig2902.7914.1 vs. uniprot
Match: A0A6H5KMM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM6_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 1.830e-95
Identity = 177/313 (56.55%), Postives = 207/313 (66.13%), Query Frame = 1 
Query:  760 MDHKVIKKWVENVASRKTKATASQIHRYFKGRVDPDVIDSYLEAFNNNYRDTVIQCAEFLNIFVQPEEEVVAS---AEPVED---------------------------VNDDLVGGAFAAKERNRIGDFDFAEHPLERRANEAYSNDCKDLKLLQAILDEARGQPGLAPTRKMVSKMVKRIKASQEELKKIRQDHKRQDSKKEIPQALHPAYAGNKPAFTSFQPPTIAADKEPDAMVDIPPNVVGWVIGKAGVRINEIQQRTNAAMWMDQNFPAGEMRKLHIHGNKTQVDAAIKEVEFLMNSAPVNNARPGK 1608
            MDH VIK+WV  VASR+  AT  +I RYF GRVD DVID Y E F+N  R TVIQCAEFLNI V P++++       EP +                            +N +LV GAF AKER + GD+   EHPLERRANEA  NDCKDL +L AIL EA G+ GL   +KM+ KMVKRI  ++EE KK+R     +  ++   Q LHPAYA  +P F+SF P TI  DK PDAM+DIPPNVVGWVIGK G RIN+IQ +TNAAMWMDQNFP G MRKLHIHGNK QV+AAI EVEFLM SAPVN  RP +
Sbjct:  400 MDHSVIKEWVLEVASRRVLATPDEIKRYFHGRVDEDVIDFYNEEFSN-CRATVIQCAEFLNIEVPPDDQISRGDLKREPEDQGARGGGVXXXXXXXXXXXXXXXXXXXXINSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMVKRINETREEQKKLRTQSVVKPKREVSAQKLHPAYASKEPTFSSFAPSTIP-DKVPDAMLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPVNTPRPAR 710
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BLAST of mRNA_H-paniculata_contig2902.7914.1 vs. uniprot
Match: A0A7S4RG89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RG89_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.190e-6
Identity = 26/73 (35.62%), Postives = 49/73 (67.12%), Query Frame = 1 
Query: 1372 DAMVDIPPNVVGWVIGKAGVRINEIQQRTNAAMWMDQN-FPAGEMRKLHIHGNKTQVDAAIKEVEFLMNSAPV 1587
            +A++++ P +VGWVIGK G RI ++ + ++A +W+DQ+     + R +++ G K  VD A+K ++ L+  AP+
Sbjct:  217 EAILEMSPQIVGWVIGKGGQRIRDLMEESSAKIWIDQDCMTPAQYRVVYVSGLKNSVDLAVKRMQELVERAPI 289
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BLAST of mRNA_H-paniculata_contig2902.7914.1 vs. uniprot
Match: A0A7S1ZYU7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYU7_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.490e-6
Identity = 26/73 (35.62%), Postives = 49/73 (67.12%), Query Frame = 1 
Query: 1372 DAMVDIPPNVVGWVIGKAGVRINEIQQRTNAAMWMDQN-FPAGEMRKLHIHGNKTQVDAAIKEVEFLMNSAPV 1587
            +A++++ P +VGWVIGK G RI ++ + ++A +W+DQ+     + R +++ G K  VD A+K ++ L+  AP+
Sbjct:  400 EAILEMSPQIVGWVIGKGGQRIRDLMEESSAKIWIDQDCMTPAQYRVVYVSGLKNSVDLAVKRMQELVERAPI 472
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BLAST of mRNA_H-paniculata_contig2902.7914.1 vs. uniprot
Match: D8LI18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI18_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.880e-6
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 1 
Query:   91 ICCAKKTTCVGCMKKPSRRRLVDATNQLKRVQQGMVA 201
            ICCAKKT CV C KKPSR RL++AT QLKRVQQG  A
Sbjct:   21 ICCAKKTPCVSCRKKPSRPRLIEATAQLKRVQQGFQA 57
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BLAST of mRNA_H-paniculata_contig2902.7914.1 vs. uniprot
Match: A0A061RZW2_9CHLO (Far upstream element-binding protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RZW2_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 2.910e-5
Identity = 34/87 (39.08%), Postives = 45/87 (51.72%), Query Frame = 1 
Query: 1339 QPPTIAADKEPDA-----MVDIPPNVVGWVIGKAGVRINEIQQRTNAAMWMDQNFPAGEMRKLHIHGNKTQVDAAIKEVEFLMNSAP 1584
            Q PT  A   P A      V+ PP +VG VIG+ G  I  +Q  + A + +DQNFP G  R++HI G    VD  +K V  L+   P
Sbjct:  226 QDPTAGAPGAPSAGEVKQTVNCPPGIVGRVIGRGGETIRALQTSSGAHISIDQNFPEGVDRQVHIQGRPDAVDRGLKMVTELIAGGP 312
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2902.7914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LI19_ECTSI1.480e-10663.60Circadian RNA-binding protein CHLAMY 1 subunit C1 ... [more]
A0A6H5KMM6_9PHAE1.830e-9556.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4RG89_9STRA1.190e-635.62Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S1ZYU7_9STRA1.490e-635.62Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
D8LI18_ECTSI1.880e-675.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A061RZW2_9CHLO2.910e-539.08Far upstream element-binding protein n=2 Tax=Tetra... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2902contigH-paniculata_contig2902:12921..19421 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.7
Seed ortholog evalue6.4e-91
Seed eggNOG ortholog2880.D8LI19
Hectar predicted targeting categoryother localisation
EggNOG free text desc.K homology RNA-binding domain
EggNOG OGs2E9NA@1,2SFZF@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size1608
Cds size1608
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929885.6991131-CDS-H-paniculata_contig2902:12920..132181622929885.6991131-CDS-H-paniculata_contig2902:12920..13218Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 12921..13218 +
1691481054.9419384-CDS-H-paniculata_contig2902:12920..132181691481054.9419384-CDS-H-paniculata_contig2902:12920..13218Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 12921..13218 +
1622929885.7187421-CDS-H-paniculata_contig2902:13514..137681622929885.7187421-CDS-H-paniculata_contig2902:13514..13768Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 13515..13768 +
1691481054.955719-CDS-H-paniculata_contig2902:13514..137681691481054.955719-CDS-H-paniculata_contig2902:13514..13768Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 13515..13768 +
1622929885.7336361-CDS-H-paniculata_contig2902:14195..145081622929885.7336361-CDS-H-paniculata_contig2902:14195..14508Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 14196..14508 +
1691481054.9667964-CDS-H-paniculata_contig2902:14195..145081691481054.9667964-CDS-H-paniculata_contig2902:14195..14508Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 14196..14508 +
1622929885.7484298-CDS-H-paniculata_contig2902:15040..151321622929885.7484298-CDS-H-paniculata_contig2902:15040..15132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 15041..15132 +
1691481054.9755747-CDS-H-paniculata_contig2902:15040..151321691481054.9755747-CDS-H-paniculata_contig2902:15040..15132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 15041..15132 +
1622929885.7651393-CDS-H-paniculata_contig2902:15650..158121622929885.7651393-CDS-H-paniculata_contig2902:15650..15812Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 15651..15812 +
1691481054.984282-CDS-H-paniculata_contig2902:15650..158121691481054.984282-CDS-H-paniculata_contig2902:15650..15812Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 15651..15812 +
1622929885.7779937-CDS-H-paniculata_contig2902:16286..163941622929885.7779937-CDS-H-paniculata_contig2902:16286..16394Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 16287..16394 +
1691481054.9929802-CDS-H-paniculata_contig2902:16286..163941691481054.9929802-CDS-H-paniculata_contig2902:16286..16394Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 16287..16394 +
1622929885.7924216-CDS-H-paniculata_contig2902:16879..169631622929885.7924216-CDS-H-paniculata_contig2902:16879..16963Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 16880..16963 +
1691481055.0023718-CDS-H-paniculata_contig2902:16879..169631691481055.0023718-CDS-H-paniculata_contig2902:16879..16963Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 16880..16963 +
1622929885.8104882-CDS-H-paniculata_contig2902:18935..190911622929885.8104882-CDS-H-paniculata_contig2902:18935..19091Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 18936..19091 +
1691481055.0117712-CDS-H-paniculata_contig2902:18935..190911691481055.0117712-CDS-H-paniculata_contig2902:18935..19091Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 18936..19091 +
1622929885.823082-CDS-H-paniculata_contig2902:19280..194211622929885.823082-CDS-H-paniculata_contig2902:19280..19421Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 19281..19421 +
1691481055.021568-CDS-H-paniculata_contig2902:19280..194211691481055.021568-CDS-H-paniculata_contig2902:19280..19421Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2902 19281..19421 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2902.7914.1prot_H-paniculata_contig2902.7914.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2902 12921..19421 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2902.7914.1

>prot_H-paniculata_contig2902.7914.1 ID=prot_H-paniculata_contig2902.7914.1|Name=mRNA_H-paniculata_contig2902.7914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=536bp
QGCSKCDDEFCSACENFLVKCEYCEKEYCLICCAKKTTCVGCMKKPSRRR
LVDATNQLKRVQQGMVAVGVVGQASGSPPAAAASSQVRYMYPSVRCHDGE
NSTISFLVTAPRQAEVEAKEQAKAKLAAEEQAVAEKIAAQKSAAERAAAA
AAKQEEAYRAAAAAAESDLAVGDAPTNSAAPDRERGTNMMSKKKKKKKKK
GSGANVVATVPTSAPVAPPAAPAQAPAPAPAPEPSYPDQSLIYLTQHGLD
DDCMDHKVIKKWVENVASRKTKATASQIHRYFKGRVDPDVIDSYLEAFNN
NYRDTVIQCAEFLNIFVQPEEEVVASAEPVEDVNDDLVGGAFAAKERNRI
GDFDFAEHPLERRANEAYSNDCKDLKLLQAILDEARGQPGLAPTRKMVSK
MVKRIKASQEELKKIRQDHKRQDSKKEIPQALHPAYAGNKPAFTSFQPPT
IAADKEPDAMVDIPPNVVGWVIGKAGVRINEIQQRTNAAMWMDQNFPAGE
MRKLHIHGNKTQVDAAIKEVEFLMNSAPVNNARPGK
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mRNA from alignment at H-paniculata_contig2902:12921..19421+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2902.7914.1 ID=mRNA_H-paniculata_contig2902.7914.1|Name=mRNA_H-paniculata_contig2902.7914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6501bp|location=Sequence derived from alignment at H-paniculata_contig2902:12921..19421+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGCTGTTCGAAGTGCGATGATGAGTTTTGCAGCGCGTGCGAGAATTT
CCTGGTGAAATGCGAATACTGCGAGAAGGAGTATTGCTTGATCTGTTGCG
CAAAGAAGACAACATGTGTGGGGTGTATGAAGAAGCCCAGCCGACGCCGT
CTGGTGGATGCCACCAATCAGCTGAAGCGCGTGCAGCAGGGCATGGTGGC
GGTTGGCGTGGTGGGCCAAGCCTCCGGTTCCCCGCCTGCCGCTGCGGCGT
CATCCCAGGTTAGATATATGTATCCATCTGTGCGTTGTCACGATGGTGGT
CTTTGGAAATTGCGATCTTACTAATAATTCGTTCACCTTCTTGTTAACGC
TATGAGCTCAGGTTCAAAGACAACGCAGGTTTTATTCTGTTGGTTGCGAC
CGCGTCACATTAAATTCCATTTTTTTTCCCCTCCTGAAGTCGTCACGATA
ATTCCTGTTTCTGCTGTGATAAATACCTCCCCCCCCCTCATGCGCTCCGT
CCCCCCAAAAATGCGTCATCAATGGTCTAACAACTACGGTATGCAAAAAC
GAGTACCCCTGCCCGCCATGTAGCGTAGGAAATGTACTAGTGAGAGAATT
CAACCATTTCTTTTCTTGTTACGGCACCCCGACAGGCGGAAGTAGAGGCC
AAGGAACAGGCAAAGGCTAAGTTGGCGGCTGAAGAACAAGCGGTCGCCGA
AAAAATAGCAGCCCAGAAATCAGCTGCAGAACGCGCGGCCGCCGCTGCTG
CCAAGCAAGAGGAAGCCTACCGTGCTGCCGCTGCCGCTGCTGAATCTGAC
TTGGCCGTTGGCGATGCTCCCACCAATAGTGCTGCTCCTGACCGAGAGGT
TTGTTCCTTTAGATAGGTGTACTTTTGAAAAGAGGTGCCGTTGATGTTGC
ATGACTCCAAAGGTAGCATGCCAGATAGATCATATTTGGTGTCACAAGAT
TAGTGTTCGCCTGTGAGGTGGATGTAGACGTGGCGTCGGTGCCGATGACT
GAATTTGGTTGTTTGCTTTCACAAGCACATGCGTGGATTGGGCACTAGTT
AGCTTTCAGTTCGCGGCGCGAAAAAATACGAGAGGAGTTTTCGATCTTGG
CTTAATTGATTGGTAAAAATTGGTGGCCTGCGATAAGAAAAAAAACCCGT
GCCCACCCGCCTGCCCGCCGGACGTTGTTCATCCCTCCATTTTCCTCCGA
ACTTCAACCCCAATTTTGTGGCCACATGCAATACGCCGGTTTTGGATTGT
TCTTTGGTTTCTTTTTTAACGCCAGCGTGGCACCAATATGATGTCGAAGA
AGAAGAAGAAGAAAAAGAAGAAGGGCTCTGGCGCGAACGTCGTCGCCACC
GTCCCTACCTCTGCTCCCGTCGCTCCGCCAGCGGCACCTGCCCAGGCCCC
TGCCCCTGCTCCCGCACCTGAGCCGTCTTACCCTGATCAGTCTTTGATTT
ATTTGACGCAGCACGGTCTTGACGATGATTGCATGGATCACAAGGTTATC
AAAAAGTGGGTGGAAAATGTAGCTTCTCGCAAGACTAAAGCGACCGCTTC
GCAAATCCATCGGTACTTCAAGGGCCGTGTCGACCCAGGTGTAGTGTGCA
CATCGCGTTGTGTTGAATGGTGCTTTCTGGCTCTGTAATGTTGCTGGGAA
CTGGTTGTGATTTGCTCGCTTCATTGGTTGTGTGGCCACACTGCCGTTAA
CACTTTGTAGGCAAAGCACCTTTTGAGCTCTTGAGTAGAGTAGTAATGGT
GGTTAGTTAGTAGTTAATGTGGTATGCTAGTGAGAATCTCTTCGCAGCAC
CGAGGCTAAACACTTCATTGTAGAGTCTCACCCTAATATATGGTCGATGT
AGATGAACCACAAGACCCTAGAGAGTGCTGTGAGGCAACACCCTCGGCAC
ACGTCGCGATTCGTGACCGTTTTATTCAACATATTCGTCCCCCACGGGTT
GCCGAAAAACGGTCGTCCGGTTTCTTGAAAGGTCATCACCAGCAACCCAA
CATCTAAGGCAACACGGCATCAGCATATCGAAAACCTCCCACACACCTAC
GCCCAAGCAGAACATACGAACGAAAATGATTGAAATCTTGTGTTTTATTC
TCAACTTGACATTTCACTAGATGTTATCGATTCCTACCTGGAGGCCTTCA
ACAACAATTACCGAGATACGGTCATTCAGTGCGCTGAGTTTCTCAACATA
TTCGTACAACCGGTGAGAGCCTTTACCTGTCACAAAACACCCTCTGAATA
GTAGTAGTCTGTACAATCTGTACAATGTTTGAGTGGTCGGGGTGAATATT
CGGCAGCGTGTCCTTTTTCCAGCCAAGAACGTGGGCAACATTTGTTGGTT
CTCTTGTTTTTTTATCGGACTTCATGCTCTCGAATTTGATTTGGTTTCGC
TGTGTAGGAAACCGCCGTCTGATCACTAGACCGTAATAGTCAGCACTGAT
ACTGCGACTTAATGGCGAGATTGATTCATTTACGGCTTCTCTGTTGCTGG
TGTGTCTTTGAATTACATTGGGTTGCCTTGTGTTCGCGTTGTGATGATGG
AGTTATTTTCGTGCGACTGTTTTTCATTACTCTTTCATGCGTTGGGTTTC
GTTTTCCATTGCTACGTATCGACTCTGTTGATGTATGTGGTCGGACGGTT
TCCCTTTTCCCCTGCATTGCCTTCCTTTGGTTTCGTGGTCGTAACAACGG
TGGTGTCCGATTTGGCAGGAGAAAGTTGAGGAAGAGGAGGTGGTGGCGTC
GGCGGAACCCGTAGAGGATGTGAACGATGACTTGGTTGGCGGAGCGTTCG
CTGCGAAGGAGCGCAACCGGATCGGAGACTTTGACTTCGCTGAGCACCCG
CTCGAGAGGCGTGCCAATGAGGCTTACAGTAACGATTGCAAGGTACAAAA
TCGTGTGTACCGAAAATTACCGGTAGAATATTTGAAGCCTTTGAAATTGG
GTAGTTTGGTCATGATCTTTTTCTCATTACGCATCATCAATGGTCTGAAT
ATGCCCCAGTGAGGCGTGTTCTTCATTGAACGATTTTAGAAACTTAACAG
AATATCTTCCGTAAGGCAAGATACGATTTCTGGAATGTTGAACATCGATA
TCTATACTCGAGAGGCGAAGCTCTTGCGCATCATCCTGTTTGACGCGCAA
GCGGGGATACATGAACCAGGTGCAGAGTAAGGTCATATTCCCAGCCCAAC
AGAGCATTTCTAACACGGTTTCGAAATCGCGGGGTTTTCGGTTTCGGGCT
TGATTCACAAAAACCGACTACAGTACAATGCGGTTGCGGTCATTTTCTCT
GTCTCATAAATCCTATGAACGGCGGCGGCCGTGGTGATGATGCCCCGTGC
GCGCGTCAAAATAAAGGATTTGAAGCTGTTACAAGCCATCCTGGACGAAG
CTCGGGGACAGCCCGGACTGGCCCCTACGCGCAAGATGGTGAGCAAGATG
GTGAAGAGGATTAAGGCCAGCCAGGTGAGTTGGATGTATGGTCGTTGACT
GTTTTGTTGGTCAACGAAGTGGTTTCGTTCTTTTTTTCATGAGCGCACCT
TAATCCGGTCAGATTACAACTCCAACCCCTGAACGCAGAGAGGAAGTTTG
AGTACCAGGGTAGCATTGTAAATACAACTTGGCGGTAGAATTGCTTTTGG
CCTCAGATTTTTGTACATACATTTCATGCACAGCTTGTTCTTGGGTGGTG
GCGTCCGTTTCGTGTGAGCACCAGCTCTTCATGTGATTTGTTTGTTGTAT
GTACCAACGGATCATACGTTAGGGTTGGCGTGGAAAATACTTGTGGAGGA
TAACACAATACCCTTCTTGTTTCAAAGGCGATACTTGTGAGATTCGTAGA
ACTCACACATTAGAAGCAGTCACCTTTTGGAGTATCTTCCGTACTAACTA
ATGCTTTTATATTACCCTTTTTTTCGTTGTTGACTTTGTTGGTCCGTCTT
TGTTCTCAGGAGGAACTAAAAAAGATCCGCCAGGACCACAAGAGGCAGGA
CAGTAAGAAGGAAATTCCTCAGGCGCTGCACCCCGCGTACGCCGTGAGTG
ACCGCTTAGAGTTTGTCTGCATCTCCATTATTTTATCGTTATTCAACAGT
GTTCCGCCTGTGCCTTTTTTTTTTTCGACACTCCCTAAAAAATTGTTACT
CGGTGCAGTCTGTTATGTTGGCGAAGCAGAGAATCACGTTGCTGCTGCTG
TATTGGTACCTCTCACAAAAACTCTGGGTTAATTCCATTCTACACCAGTG
AGTGCACAAAGGCCTTGCATACATTGAATAAAAGAAAAATATGCCAATTG
TACAAACGTCGGAAGTCGTGTTCCAACCTATAGCCCGACACGAATATCAT
ACACATCTTTGCTTCACCTGTTCTCATGGAATGCTATCTGGCACGCGAAC
ACACCTCATCACTACATTCCATTTGCATGTGAACTCGGGCGCCTCAAGAC
AGGGAAGACAGTTGTCTGGGACGAAACATGAACCACACCTACCGTTGATT
TAGCTCTCAGCACAGATCACTTCGATATTCTGCGAGCCGATACCTGTGCA
CGAGTGCTTAGCAGCCAACTGTTGTTGCTGCAACCCAACAAGTCCATGTA
AAAAGGTCATAAAGTGTATCTTCAGGCTACAAATAAAACGACGAGTGGGG
AAAGGTTTTACCCCCCGTACAAATACGAATGGAGCATTGCAAATATTTCG
AACTATCGTTATTCGTCTTGGGTAAACACGTATTTATTCGTTTACAATTG
TATGAATGGTCATCCAACTGATGGGTCACCAGGTGGTCGTACACCCGGCG
AACAGTCACACATGCAGCTCCTGTTTATTTTCTGGATGGTGCTTTACAGA
TTGAATCCTCCATTTGCCCGAGCTTTTCGATGTTGCATGGTATATCGAGT
ACACTGCACTTATTTGCGTCATGTGGACATCTTCCACAACTCAAACAGAT
ACAGTGTTAATTCCAGATTTCTCGTATTTATTTGTATCTTGTATTTGTAT
ATGTCCGGGGGGTGAGGTCTTTCGCAACATAAAGTTCATGATCTGGAGCA
CACGACTAGCTATTTACTGCTTTTGTTTCAGGCGAAATATCGGCGCAGTA
ATCTTTCGCAACACTGGAATGCCGGTTTGCCCTCGGGGAGGAGTGATACC
GCGGCGGACGCATCTTCCTGCCTGGCTTCTCCCACATATGCTCAACCTGT
CCCCAAACTCGAGCAGCGCCTCGCTTTTTTTTAGGAAACACGTGTCCATC
ATCTTCGCAGTCAAGTATGCTTGGTGGGCGTTGTAGTTCAATCTGCTGAA
ATGTAGGTCGAGATAATGGACCCAGGGGGAGAAAGGGATGAAAAACAAGA
TTTTCGTCATAATCATGCGTTTGTAAGGAGACGTCTATCGGCTGAACACT
GCCAAATCTTGTGATTTATTATCACTACCCATGTGGAAGTTGTTATCATT
TGGCCGCAGGTCTGAGCGATTAGACTAATTTCAAACGTTAGTTTTTCGTG
AGAACACAAGATATGCCTTGTTGTTTAGTCATCATCAGTATCGGGATTTT
TTCTCGACTCTACCGCGCTCGTGTGACGCGACCCTCCTCGGTGTCTGGAG
GTGAACGATGGAAATAGTGGCGTCCCTTCTCTGAGTACAATATATCTGAA
GGCACGTAATCGTTTCAATTGCACCTCTTTCCGTATTTACCCCCTTACCC
CACCCCACGTCAAAGCACAGTAACATCTATTGCTCAGTATCCAATGCACT
TCAAAGTAAGTTGTCCAGCAGTACACCACACGGACGTTGATGAGAGTGTA
AAAATTTTTAGGCAAGTATGGTTGCACCGGGAAACACTTGGAACACTTCG
TCACTGTATAAACTGGTCGGAGAACCGACCGTGGGGGTCTCAAACCTGCG
TTACGTATCTGAAAAGTGGTCCTAGATGTTTATCATCACTTTGTCGTACG
TATTCAATATCTTAATCAACATACCGTTGCCTCTCCCTCCCTCCCTCCCT
CCCTCCGCAAATAAGGGTAACAAGCCTGCTTTCACCAGTTTTCAGCCGCC
TACTATTGCTGCCGATAAAGAGCCAGATGCGATGGTAGACATACCGCCGA
ACGTGGTGGGGTGGGTGATTGGAAAGGCCGGGGTGCGCATCAACGAGATT
CAACAGCGTACCAATGCCGCGGTGAGTTTTTTTTTTTTCTTTTTTTGCCA
GTGTAGGCAGTATGTCCACCTACCTACCGTACCGCGTGACATGGTTTTTC
GTTCGAACTTTGCTAACATTTGCGCTTTTTTTTGTTTGTTTGTTCCAAAT
TCCCCCCGGGTAAATTGGGTTCTCTCATTTTCTTTTTTCAATGTTTACTC
TTTTCTTCAGATGTGGATGGACCAAAATTTCCCTGCGGGTGAGATGCGCA
AGCTCCACATCCACGGAAATAAGACGCAAGTGGACGCGGCCATTAAGGAA
GTGGAATTCCTAATGAACTCGGCACCTGTCAACAACGCTCGTCCCGGCAA
G
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Coding sequence (CDS) from alignment at H-paniculata_contig2902:12921..19421+

>mRNA_H-paniculata_contig2902.7914.1 ID=mRNA_H-paniculata_contig2902.7914.1|Name=mRNA_H-paniculata_contig2902.7914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3216bp|location=Sequence derived from alignment at H-paniculata_contig2902:12921..19421+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGCTGTTCGAAGTGCGATGATGAGTTTTGCAGCGCGTGCGAGAATTT
CCTGGTGAAATGCGAATACTGCGAGAAGGAGTATTGCTTGATCTGTTGCG
CAAAGAAGACAACATGTGTGGGGTGTATGAAGAAGCCCAGCCGACGCCGT
CTGGTGGATGCCACCAATCAGCTGAAGCGCGTGCAGCAGGGCATGGTGGC
GGTTGGCGTGGTGGGCCAAGCCTCCGGTTCCCCGCCTGCCGCTGCGGCGT
CATCCCAGGTTAGATATATGTATCCATCTGTGCGTTGTCACGATGGTGCA
GGGCTGTTCGAAGTGCGATGATGAGTTTTGCAGCGCGTGCGAGAATTTCC
TGGTGAAATGCGAATACTGCGAGAAGGAGTATTGCTTGATCTGTTGCGCA
AAGAAGACAACATGTGTGGGGTGTATGAAGAAGCCCAGCCGACGCCGTCT
GGTGGATGCCACCAATCAGCTGAAGCGCGTGCAGCAGGGCATGGTGGCGG
TTGGCGTGGTGGGCCAAGCCTCCGGTTCCCCGCCTGCCGCTGCGGCGTCA
TCCCAGGTTAGATATATGTATCCATCTGTGCGTTGTCACGATGGTGAGAA
TTCAACCATTTCTTTTCTTGTTACGGCACCCCGACAGGCGGAAGTAGAGG
CCAAGGAACAGGCAAAGGCTAAGTTGGCGGCTGAAGAACAAGCGGTCGCC
GAAAAAATAGCAGCCCAGAAATCAGCTGCAGAACGCGCGGCCGCCGCTGC
TGCCAAGCAAGAGGAAGCCTACCGTGCTGCCGCTGCCGCTGCTGAATCTG
ACTTGGCCGTTGGCGATGCTCCCACCAATAGTGCTGCTCCTGACCGAGAG
AGAATTCAACCATTTCTTTTCTTGTTACGGCACCCCGACAGGCGGAAGTA
GAGGCCAAGGAACAGGCAAAGGCTAAGTTGGCGGCTGAAGAACAAGCGGT
CGCCGAAAAAATAGCAGCCCAGAAATCAGCTGCAGAACGCGCGGCCGCCG
CTGCTGCCAAGCAAGAGGAAGCCTACCGTGCTGCCGCTGCCGCTGCTGAA
TCTGACTTGGCCGTTGGCGATGCTCCCACCAATAGTGCTGCTCCTGACCG
AGAGCGTGGCACCAATATGATGTCGAAGAAGAAGAAGAAGAAAAAGAAGA
AGGGCTCTGGCGCGAACGTCGTCGCCACCGTCCCTACCTCTGCTCCCGTC
GCTCCGCCAGCGGCACCTGCCCAGGCCCCTGCCCCTGCTCCCGCACCTGA
GCCGTCTTACCCTGATCAGTCTTTGATTTATTTGACGCAGCACGGTCTTG
ACGATGATTGCATGGATCACAAGGTTATCAAAAAGTGGGTGGAAAATGTA
GCTTCTCGCAAGACTAAAGCGACCGCTTCGCAAATCCATCGGTACTTCAA
GGGCCGTGTCGACCCAGCGTGGCACCAATATGATGTCGAAGAAGAAGAAG
AAGAAAAAGAAGAAGGGCTCTGGCGCGAACGTCGTCGCCACCGTCCCTAC
CTCTGCTCCCGTCGCTCCGCCAGCGGCACCTGCCCAGGCCCCTGCCCCTG
CTCCCGCACCTGAGCCGTCTTACCCTGATCAGTCTTTGATTTATTTGACG
CAGCACGGTCTTGACGATGATTGCATGGATCACAAGGTTATCAAAAAGTG
GGTGGAAAATGTAGCTTCTCGCAAGACTAAAGCGACCGCTTCGCAAATCC
ATCGGTACTTCAAGGGCCGTGTCGACCCAGATGTTATCGATTCCTACCTG
GAGGCCTTCAACAACAATTACCGAGATACGGTCATTCAGTGCGCTGAGTT
TCTCAACATATTCGTACAACCGATGTTATCGATTCCTACCTGGAGGCCTT
CAACAACAATTACCGAGATACGGTCATTCAGTGCGCTGAGTTTCTCAACA
TATTCGTACAACCGGAAGAGGAGGTGGTGGCGTCGGCGGAACCCGTAGAG
GATGTGAACGATGACTTGGTTGGCGGAGCGTTCGCTGCGAAGGAGCGCAA
CCGGATCGGAGACTTTGACTTCGCTGAGCACCCGCTCGAGAGGCGTGCCA
ATGAGGCTTACAGTAACGATTGCAAGGAAGAGGAGGTGGTGGCGTCGGCG
GAACCCGTAGAGGATGTGAACGATGACTTGGTTGGCGGAGCGTTCGCTGC
GAAGGAGCGCAACCGGATCGGAGACTTTGACTTCGCTGAGCACCCGCTCG
AGAGGCGTGCCAATGAGGCTTACAGTAACGATTGCAAGGATTTGAAGCTG
TTACAAGCCATCCTGGACGAAGCTCGGGGACAGCCCGGACTGGCCCCTAC
GCGCAAGATGGTGAGCAAGATGGTGAAGAGGATTAAGGCCAGCCAGGATT
TGAAGCTGTTACAAGCCATCCTGGACGAAGCTCGGGGACAGCCCGGACTG
GCCCCTACGCGCAAGATGGTGAGCAAGATGGTGAAGAGGATTAAGGCCAG
CCAGGAGGAACTAAAAAAGATCCGCCAGGACCACAAGAGGCAGGACAGTA
AGAAGGAAATTCCTCAGGCGCTGCACCCCGCGTACGCCGAGGAACTAAAA
AAGATCCGCCAGGACCACAAGAGGCAGGACAGTAAGAAGGAAATTCCTCA
GGCGCTGCACCCCGCGTACGCCGGTAACAAGCCTGCTTTCACCAGTTTTC
AGCCGCCTACTATTGCTGCCGATAAAGAGCCAGATGCGATGGTAGACATA
CCGCCGAACGTGGTGGGGTGGGTGATTGGAAAGGCCGGGGTGCGCATCAA
CGAGATTCAACAGCGTACCAATGCCGCGGGTAACAAGCCTGCTTTCACCA
GTTTTCAGCCGCCTACTATTGCTGCCGATAAAGAGCCAGATGCGATGGTA
GACATACCGCCGAACGTGGTGGGGTGGGTGATTGGAAAGGCCGGGGTGCG
CATCAACGAGATTCAACAGCGTACCAATGCCGCGATGTGGATGGACCAAA
ATTTCCCTGCGGGTGAGATGCGCAAGCTCCACATCCACGGAAATAAGACG
CAAGTGGACGCGGCCATTAAGGAAGTGGAATTCCTAATGAACTCGGCACC
TGTCAACAACGCTCGTCCCGGCAAGATGTGGATGGACCAAAATTTCCCTG
CGGGTGAGATGCGCAAGCTCCACATCCACGGAAATAAGACGCAAGTGGAC
GCGGCCATTAAGGAAGTGGAATTCCTAATGAACTCGGCACCTGTCAACAA
CGCTCGTCCCGGCAAG
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