mRNA_H-paniculata_contig29012.7911.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 360 bits (923), Expect = 2.960e-119 Identity = 164/273 (60.07%), Postives = 196/273 (71.79%), Query Frame = 1
Query: 1 GFENMEHCPHCMQSKGPAAVRSRAEAKTDPTELETYGGGRWPHLNSYMRGELLPNGNYYETDKISVRHGLCGDPGQARQPEGDNKYAQDNSVYPVLETFAEGSVVEMKVVMSTYHWGHLEFFICNADDLSGGSDGTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYYVDPPCRAVETDQSKPTGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCHHPGYEEFNPTSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSGG 819
G ++ +CPHC QS+GPAA+R+R G WPH N GE NGNY E+D+++ RHG+CGDP Q EG NKY Q+NS YPVLET+AEG ++E+K+V+STYHWGH+E F+C+ADDL G D VTQ CFN+YPLDRA DD PIDP + GR+ +DPPCRA ETDQ G GDV TAR+QLPQG+TCERC +QM YYTGNSC H GY EFNP SWPS CAP+K DWI G CGDGD+YPEEFWNCAD++ITS G
Sbjct: 47 GSPDINYCPHCFQSRGPAAIRARG------------GDQPWPHFN----GERAKNGNYIESDEVAQRHGVCGDPEQTAA-EGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDG 302
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 351 bits (900), Expect = 5.340e-118 Identity = 161/273 (58.97%), Postives = 196/273 (71.79%), Query Frame = 1
Query: 1 GFENMEHCPHCMQSKGPAAVRSRAEAKTDPTELETYGGGRWPHLNSYMRGELLPNGNYYETDKISVRHGLCGDPGQARQPEGDNKYAQDNSVYPVLETFAEGSVVEMKVVMSTYHWGHLEFFICNADDLSGGSDGTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYYVDPPCRAVETDQSKPTGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCHHPGYEEFNPTSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSGG 819
G ++ +CPHC QS+GPAAVR+R K WPH N GE NGNY E+++++ RHG+CGDP Q E NKY Q+NS YPV ET+AEG ++E+K+V+STYHWGH+E F+CNA +L GG D TVTQ CFN++PLDRA DD P DP++ GR+ +DPPCRA ETDQ+ G DV TAR++LPQGL+CERC +QMVYYTGNSC H GY EFNP SWPS CAP+K DWI G CGDGD+YPEEFWNCADI+ITS G
Sbjct: 50 GSPDINYCPHCFQSRGPAAVRARGGDKP------------WPHFN----GERAENGNYIESEEVARRHGICGDPEQTAA-ESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDG 305
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 350 bits (898), Expect = 3.660e-117 Identity = 158/274 (57.66%), Postives = 190/274 (69.34%), Query Frame = 1
Query: 4 FENMEHCPHCMQSKGPAAVRSRAEAKTDPTELETYGGGRWPHLNSYMRGELLPNGNYYETDKISVRHGLCGDPGQARQPEGDNKYAQDNSVYPVLETFAEGSVVEMKVVMSTYHWGHLEFFICNADDLSGGSDGTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYYVDPPCRAVETDQSKPTGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCHHPGYEEFNPTSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSGGFS 825
FE ME+CP C ++GP V+ R TDP L YG G WP +Y +GE+ NGNY E D+I+ RHG+CGDP Q + EG N Y+ N +P+L T+ EG V+E+K+ M+ YHWGH+EFFICNAD++ DG Q CFN YPL RA D + SPIDPN+PGRYYVDP CR ETDQ+KP G G V+ A YQLP+GLTC+RC +QM YYTGNSC H GYEEF P SWPS CAP K DWI LD +CG+ SYPEEFW CAD AIT G +
Sbjct: 11 FERMEYCPSCYNARGPTYVKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQ-NEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMED-PDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAITPDGMA 282
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 353 bits (907), Expect = 1.180e-116 Identity = 173/341 (50.73%), Postives = 204/341 (59.82%), Query Frame = 1
Query: 4 FENMEHCPHCMQSKGPAAVRSRAEAKTDPTELETYGGGRWPHLNSYMRGELLPNGNYYETDKISVRHGLCGDPGQARQPEGDNKYAQDNSVYPVLETFAEGSVVEMKVVMSTYHW-----------------------------------------------------------------------GHLEFFICNADDLSGGSDGTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYYVDPPCRAVETDQSKPTGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCHHPGYEEFNPTSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITS 813
+ ++ CPHC QS+GP+AVR R E T+ L YG G WPHL SY R E+ NGNYYE ++ISVRHG+CGDP Q + EG N Y Q+NS YPV ++EG ++E+K+V+STYHW GHLEFFICNA+D+S DG VTQGCFN +PLDRA DDGDASPIDP+H GRYY+DPPCRA ETDQ G GDV TARY+LP GLTC RC +QMVYYTGN+C HPGY+EF+P S P CAP KEDW+ GMCG+ YPEEFWNCADI ITS
Sbjct: 29 YSDINWCPHCFQSRGPSAVRERGEENTEEAVLAMYGRGEWPHLFSYERNEVHGNGNYYEPEEISVRHGICGDPEQTKA-EGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDMSD-PDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEITS 367
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 357 bits (916), Expect = 1.750e-115 Identity = 164/273 (60.07%), Postives = 196/273 (71.79%), Query Frame = 1
Query: 1 GFENMEHCPHCMQSKGPAAVRSRAEAKTDPTELETYGGGRWPHLNSYMRGELLPNGNYYETDKISVRHGLCGDPGQARQPEGDNKYAQDNSVYPVLETFAEGSVVEMKVVMSTYHWGHLEFFICNADDLSGGSDGTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYYVDPPCRAVETDQSKPTGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCHHPGYEEFNPTSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSGG 819
G ++ +CPHC QS+GPAA+R+R K WPH N GE NGNY E+++++ RHG+CGDP Q E NKY +NS YPVLET+AEG ++E K+V+STYHWGH+E F+C+ADDL GG D TVTQ CFN++PLDR DD SPIDP++ GR+ +DPPCRA ETDQ G GDV TAR++LPQGLTCERC +QMVYYTGNSC H GY EFNP SWPS CAP K DWI G CGDGD+YPEEFWNCADI+ITS G
Sbjct: 49 GSPDINYCPHCFQSRGPAAIRARGGDKP------------WPHFN----GERAENGNYIESEEVAQRHGICGDPEQTAA-EDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADISITSDG 304
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 345 bits (885), Expect = 6.500e-114 Identity = 159/273 (58.24%), Postives = 193/273 (70.70%), Query Frame = 1
Query: 1 GFENMEHCPHCMQSKGPAAVRSRAEAKTDPTELETYGGGRWPHLNSYMRGELLPNGNYYETDKISVRHGLCGDPGQARQPEGDNKYAQDNSVYPVLETFAEGSVVEMKVVMSTYHWGHLEFFICNADDLSGGSDGTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYYVDPPCRAVETDQSKPTGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCHHPGYEEFNPTSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSGG 819
G ++ +CPHC QS+GPAA+R+R G WPH N GE NGNY E+D+++ RHG+CGDP Q EG NKY Q+NS YPVLET+AEG ++E+K+V+STYHWGH+E F+C+ADDL G D VTQ CFN++PLDRA DD PIDP + GR+ +DPPCRA ETDQ G GDV TAR+QLPQG+TCERC +QM Y+ NSC H GY EFNP SWP CAP+K DWI G CGDGD+YPEEFWNCAD++ITS G
Sbjct: 18 GSPDINYCPHCFQSRGPAAIRARG------------GDQPWPHFN----GERAENGNYIESDEVAQRHGVCGDPEQTAA-EGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADVSITSDG 271
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 341 bits (875), Expect = 1.260e-111 Identity = 157/266 (59.02%), Postives = 187/266 (70.30%), Query Frame = 1
Query: 22 CPHCMQSKGPAAVRSRAEAKTDPTELETYGGGRWPHLNSYMRGELLPNGNYYETDKISVRHGLCGDPGQARQPEGDNKYAQDNSVYPVLETFAEGSVVEMKVVMSTYHWGHLEFFICNADDLSGGSDGTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYYVDPPCRAVETDQSKPTGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCHHPGYEEFNPTSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSGG 819
CPHC QS+GPAA+R R+ K WPH +G NGNY E+D+++ RHG+CGDP Q EGDNKY ++N YPVL T+AEG V+E+K+++STYHWGH+E F+C+ DL G D VTQ CFN YPLDRA DD PIDP + GR+ +DPPCRA ETDQ G GDV TARYQLP+G+ C+RC +QMVYYTGNSC H GY EFNP SWPS CAP+K DWI G CGDGD+YPEEFWNCADI+ITS G
Sbjct: 61 CPHCYQSRGPAAIRERSGDKP------------WPHY----QGARAANGNYLESDEVAQRHGICGDPEQTAA-EGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDG 309
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 348 bits (894), Expect = 3.330e-110 Identity = 160/273 (58.61%), Postives = 195/273 (71.43%), Query Frame = 1
Query: 1 GFENMEHCPHCMQSKGPAAVRSRAEAKTDPTELETYGGGRWPHLNSYMRGELLPNGNYYETDKISVRHGLCGDPGQARQPEGDNKYAQDNSVYPVLETFAEGSVVEMKVVMSTYHWGHLEFFICNADDLSGGSDGTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYYVDPPCRAVETDQSKPTGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCHHPGYEEFNPTSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSGG 819
G N+ +CPHC QS+G AAVR+R G WPH N G+ NGNY E+++++ RHG+CGDP Q EG N Y +NS YPVLET+AEG ++E K+V+STYHWGH+E F+C+A+DL GG D TVTQ CFN++PLDR DD SPIDP++ GR+ +DPPCRA ETDQ G GDV TAR++LP+G++CERC +QMVYYTGNSC H GY EFNP SWPS CAP K DWI G CGDGD+YPEEFWNCADI+ITS G
Sbjct: 49 GSPNINYCPHCFQSRGAAAVRARG------------GDQPWPHFN----GDRAANGNYIESEEVAQRHGICGDPEQTAA-EGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADISITSDG 304
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 306 bits (785), Expect = 1.060e-98 Identity = 148/269 (55.02%), Postives = 178/269 (66.17%), Query Frame = 1
Query: 13 MEHCPHCMQSKGPAAVRSRAEAKTDPTELETYGGGRWPHLNSYMRGELLPNGNYYETDKISVRHGLCGDPGQARQPEGDNKYAQDNSVYPVLETFAEGSVVEMKVVMSTYHWGHLEFFICNADDLSGGSDGTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYYVDPPCRAVETDQSKPTGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCHHPGYEEFNPTSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSGG 819
+E CPHC ++GP V+ RA D L+ YGGG Y GE NGNY ET++I+ RHG+CGDP Q EG N Y+ N + L++F G V+EM +VM+ YHWGH EFF+CN DD+ DG TQ CFN +PL RA DDGDASPIDPN+PGRYYVDP CR ET+QS + G + RY LP + CE C +QMVYYTGN+C H GYEEFNPTSWPS CAPNK DWI LD +CG YPEEFW C+D ++TS G
Sbjct: 46 VEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGE--EFPLYF-GEFADNGNYLETNEIAKRHGVCGDPEQ-NADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDD-PDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSSNSIEGYN--IKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDG 306
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI) HSP 1 Score: 295 bits (754), Expect = 3.870e-95 Identity = 135/220 (61.36%), Postives = 162/220 (73.64%), Query Frame = 1
Query: 163 NGNYYETDKISVRHGLCGDPGQARQPEGDNKYAQDNSVYPVLETFAEGSVVEMKVVMSTYHWGHLEFFICNADDLSGGSDGTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYYVDPPCRAVETDQSKPTGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCHHPGYEEFNPTSWPSECAPNKEDWITLDPGM-CGDGDSYPEEFWNCADIAITSGG 819
NGNY ++D+ + EG N+Y Q+NS YPVLET+AEG ++E+K+V++TYHWGH+E F+C+ADDL G D VTQ CFN+YPLDRA DD SPIDP + GR+ +DPPCRA ETDQ G GDV TAR+QLPQG+TCERC +QMVYYTGNSC H GY EFNP SWPS CAP+K DWI G CGDGD+YPEEFWNCAD++ITS G
Sbjct: 49 NGNYIQSDETAA--------------EGSNRYGQENSNYPVLETYAEGGILEVKIVVATYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPEEFWNCADVSITSDG 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29012.7911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig29012.7911.1 >prot_H-paniculata_contig29012.7911.1 ID=prot_H-paniculata_contig29012.7911.1|Name=mRNA_H-paniculata_contig29012.7911.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=274bp MEHCPHCMQSKGPAAVRSRAEAKTDPTELETYGGGRWPHLNSYMRGELLPback to top mRNA from alignment at H-paniculata_contig29012:123..2616- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig29012.7911.1 ID=mRNA_H-paniculata_contig29012.7911.1|Name=mRNA_H-paniculata_contig29012.7911.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2494bp|location=Sequence derived from alignment at H-paniculata_contig29012:123..2616- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig29012:123..2616- >mRNA_H-paniculata_contig29012.7911.1 ID=mRNA_H-paniculata_contig29012.7911.1|Name=mRNA_H-paniculata_contig29012.7911.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at H-paniculata_contig29012:123..2616- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |