mRNA_H-paniculata_contig290.7903.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Match: D7G7V1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V1_ECTSI) HSP 1 Score: 512 bits (1319), Expect = 7.460e-180 Identity = 249/352 (70.74%), Postives = 274/352 (77.84%), Query Frame = 3
Query: 120 LSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDPDKEGRARAPGQLEEGLLVKSYAGPHGYEILDIALLNDNSKFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSNEGSVLFTASYDK-----------------------------------------TVRAWDMRSKNRMPIQVIEGCKDSATSVSSTPSGDEIVVGCVDGRVHTYDLRAAKVHQDDVHAPVTHASVSHDGNCLLVTCLGGILRLLEKGSGAQLNAYTGHTHDSYRMESWLTNTDAHVISVSDIEGSEDGAVYIWDIVQANVVSILRHHTRLVCSLSYHPSESMLLTASYDGTAVLWGP 1052
++ GQGP FVVRFTGDGKYC+ AGQDRTVRLYNPHR DPDKEG +A G+LE+ LLVKSYAGPHGYE+LD+A+L DNS+FVSCGEDKAAFLWDVSTGAVVRR+QGHEQRIN+CCF EGSVLFTASYDK TVRAWDMRS+NR PIQ +EGCKDSATSV + PSGDE+VVGCVDG+V TYDLR A+VH+DDVHAPVTHASVSHDGNCLLVTCLGGI+RLLEK SG+QLN YTGH H SYRMESWL NTDAHVIS GSEDG VYIWDIV+ V L+HH R VCS+SYHPSE MLLTASYDG+AVLW P
Sbjct: 1 MTVGQGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEGTTKA-GELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKGRGGVTLYNKICLRVYLVALQQSSHCCINFSPPTTHATRAQTVRAWDMRSRNRSPIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGIVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVIS-----GSEDGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPSEPMLLTASYDGSAVLWAP 346
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Match: A0A7S2WCM2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCM2_9STRA) HSP 1 Score: 323 bits (829), Expect = 5.600e-106 Identity = 162/319 (50.78%), Postives = 215/319 (67.40%), Query Frame = 3
Query: 90 MELAREPIRQLSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDPDKEGRARAPGQLEEGLLVKSYAGPHGYEILDIALLNDNSKFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSNEGSVLFTASYDKTVRAWDMRSKNRMPIQVIEGCKDSATSVSSTPSGDEIVVGCVDGRVHTYDLRAAKVHQDDVHAPVTHASVSHDGNCLLVTCLGGILRLLEKGSGAQLNAYTGHTHDSYRMESWLTNTDAHVISVSDIEGSEDGAVYIWDIVQANVVSILRHHTRLVCSLSYHPSESMLLTASYDGTAVLW 1046
M L+R+ R L + +GP R++GDGKY +T G D+T+RL+NP R D +R E L +K+Y GPH Y+I+D+ + DN+KFVSCG D+AAFL+DV +G VVRR +GH QRIN+ F+ E +VLFTASYD+TVR WD+RS+NR PIQV+ KDS TSVSS S EI+ CVDG V +DLR + + D++ P+T A++SHDG C++ +CL + LLEK G+ LN Y GH H Y +ES ++TDAH++S GSEDG V IWD+V+A V L H R V ++ HP ES L+T SYDGTAV W
Sbjct: 5 MVLSRK--RVLPSHRGPVARARWSGDGKYIITCGHDKTLRLWNPTRTDET----SRPVDGCEVALEIKAYTGPHAYDIVDVGIFRDNAKFVSCGGDRAAFLFDVQSGHVVRRFEGHSQRINSVGFNAEDTVLFTASYDQTVRCWDLRSRNREPIQVLSDFKDSVTSVSS--SAHEIITSCVDGCVRIHDLRMGECNADNLGVPLTCATLSHDGKCIVASCLNSQIGLLEKSDGSVLNTYKGHIHKQYALESCFSHTDAHILS-----GSEDGTVLIWDLVEAGVTQRLEGHKRAVGGVAPHPKESKLVTCSYDGTAVYW 310
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Match: A0A6G0WN05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN05_9STRA) HSP 1 Score: 292 bits (748), Expect = 7.670e-94 Identity = 144/317 (45.43%), Postives = 202/317 (63.72%), Query Frame = 3
Query: 105 EPIRQLSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDPDKEGRARAPGQLEEGLLVKSYAGPHGYEILDIALLNDNSKFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSNEGSVLFTASYDKTVRAWDMRSKNRM-PIQVIEGCKDSATSVSSTPSGDEIVVGCVDGRVHTYDLRAAKVHQDDVHAPVTHASVSHDGNCLLVTCLGGILRLLEKGSGAQLNAYTGHTHDSYRMESWLTNTDAHVISVSDIEGSEDGAVYIWDIVQANVVSILRHHTRLVCSLSYHPSESMLLTASYDGTAVLWGP 1052
E + L +GP + VRF G YC+T G DRT+RL+NPHR PD A +++K+Y G HGYEI D+A+ NDN+KFVSCG DK F WDVSTG V+R+ +GH +NA F+++ +VL +ASYD TVR WDMR++N PIQV++ +DS TSV T EI+ CVDG V YD+RA + +D++H PVT +++ D NC++ + G+LR EK SG +LN + GH+ SY +E +N DA+++S GSEDG V +WD++ + + H R V S++ HP+E M+LTAS D T +W P
Sbjct: 4 ESAQVLRGHEGPVYAVRFNEKGTYCMTCGSDRTIRLWNPHREGPDGPTSA---------MMIKAYKGLHGYEIRDVAIENDNAKFVSCGRDKVVFHWDVSTGKVIRKFEGHASSVNAVEFNDDCTVLCSASYDSTVRLWDMRARNSFTPIQVLDHFRDSVTSVRVTDH--EIITSCVDGFVRVYDIRAGMLTEDNLHHPVTCLALTSDLNCIVASTTNGVLRFFEKKSGTELNTFQGHSVASYGLECAFSNDDAYILS-----GSEDGRVVVWDMLTKDTALSFQAHDRPVRSIASHPAEPMILTASVDNTVKVWRP 304
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Match: K8ZAG4_NANGC (Mitogen-activated protein kinase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAG4_NANGC) HSP 1 Score: 293 bits (749), Expect = 1.630e-93 Identity = 141/337 (41.84%), Postives = 206/337 (61.13%), Query Frame = 3
Query: 87 PMELAREPIRQLSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDPDKEGRARAPGQLEEGLLVKSYAGPHGYEILDIALLNDNSKFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSNEGSVLFTASYDKTVRAWDMRSKNRMPIQVIEGCKDSATSV---------SSTPSGDEIVVGCVDGRVHTYDLRAAKVHQDDVHAPVTHASVSHDGNCLLVTCLGGILRLLEKGSGAQLNAYTGHTHDSYRMESWLTNTDAHVISVSDIEGSEDGAVYIWDIVQANV--------VSILRHHTRLVCSLSYHPSESMLLTASYDGTAVLW 1046
P L + R+L +GP + +RF G YC+T GQD++++L+NP R D + E +LV+++ GPHGYEI D+A+ DN++F SCG D A +LWDV+T VV++ GH IN+ F+ EG+V+ + SYD+TV+ WD+RS NR PIQ ++ KDS T V G E++ VDG + TYD+R + DD P++ +VS DG C+L+ L G++RLLE+ +G LN Y GHTH +Y +ES NTDA V+S GSEDG++Y+WD+V+ V++L+ H R + S+S+HPSE++L+TA YDG W
Sbjct: 12 PPSLPTKVRRKLVGHRGPIYTIRFNEKGTYCMTGGQDKSIKLWNPFRPSADAN-------KAGEAMLVQTFTGPHGYEIRDVAITTDNARFASCGGDTAFYLWDVATARVVKKFSGHAHMINSVAFNAEGTVVLSGSYDRTVKIWDLRSNNRDPIQTLDDFKDSVTRVMVLEEGGRAGKGAGGKEVLATSVDGCLRTYDIRKGVMWMDDCKEPLSSVTVSGDGQCVLMNGLDGVVRLLERSTGEMLNNYQGHTHQAYPIESCFDNTDAFVLS-----GSEDGSLYVWDLVEGGSEGGKEGKPVAVLKEHKRALGSMSFHPSEAVLVTAGYDGVGCCW 336
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Match: A0A1V9Z342_9STRA (Mitogen-activated protein kinase organizer n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z342_9STRA) HSP 1 Score: 290 bits (741), Expect = 8.450e-93 Identity = 158/324 (48.77%), Postives = 200/324 (61.73%), Query Frame = 3
Query: 84 VPMELAREPIRQLSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDPDKEGRARAPGQLEEGLLVKSYAGPHGYEILDIALLNDNSKFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSNEGSVLFTASYDKTVRAWDMRSKNRM-PIQVIEGCKDSATSVSSTPSGDEIVVGCVDGRVHTYDLRAAKVHQDDVHAPVTHASVSHDGNCLLVTCLGGILRLLEKGSGAQLNAYTGHTHDSYRMESWLTNTDAHVISVSDIEGSEDGAVYIWDIVQANVVS--ILRHHTRLVCSLSYHPSESMLLTASYDGTAVLW 1046
+P E AR L GP VRF G YC++ G DRT+RL+NPHR D E LVKSY G HGYE+ D+A+ NDN+KFVSCG DKA F WDV TG VVR+++GH INA ++ + SVL +ASYD TVR WDMRS+N PIQ++E KDS TSV T EI+ G VDG V TYDLRA + QD+VH+PV ++S D NC++ + + L EK +G++LNA+ GH DSY +E+ T DAH+ S GSEDG V IWD+V S HH + V S+ HP+E+MLLTAS D T +W
Sbjct: 1 MPFECARV----LRGHVGPVHAVRFNDKGTYCMSCGNDRTIRLWNPHREGLDGP---------ESAFLVKSYTGFHGYEVRDVAIENDNAKFVSCGRDKAIFQWDVVTGKVVRKLEGHTHSINAVEYNEDCSVLASASYDSTVRLWDMRSRNSFAPIQILEHFKDSVTSVKLTTH--EIIAGSVDGHVRTYDLRAGLLTQDNVHSPVVSVNLSSDLNCVVAATMAKTVYLFEKATGSELNAFEGHRMDSYGVEAGFTYDDAHIYS-----GSEDGRVVIWDMVHKTDTSKSFTAHH-KPVRSVVSHPTENMLLTASVDSTVKVW 303
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Match: K3WKM8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKM8_GLOUD) HSP 1 Score: 286 bits (733), Expect = 1.500e-91 Identity = 148/322 (45.96%), Postives = 200/322 (62.11%), Query Frame = 3
Query: 84 VPMELAREPIRQLSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDPDKEGRARAPGQLEEGLLVKSYAGPHGYEILDIALLNDNSKFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSNEGSVLFTASYDKTVRAWDMRSKNR-MPIQVIEGCKDSATSVSSTPSGDEIVVGCVDGRVHTYDLRAAKVHQDDVHAPVTHASVSHDGNCLLVTCLGGILRLLEKGSGAQLNAYTGHTHDSYRMESWLTNTDAHVISVSDIEGSEDGAVYIWDIVQANVVSILRHHTRLVCSLSYHPSESMLLTASYDGTAVLW 1046
+P + R L GP VRF G Y +T GQD+TVRL+NPHR D APG + LLVK+Y G HGY++ D+A+ +DNSKF SCG DKA FLWDV T V+R+ +GHE +N ++ + +VL + SYDKT+RAWDMR++N +PIQVI+ KDS TS+ S EI GCVDG V T+DLRA V+++ + PV S+S D LL +CL G +RL+EK SG + Y GH D+YR+ES ++ A V+S GSEDG VY WD+V A + S H + + +L+ HP +L+T DG+A +W
Sbjct: 1 MPDAIPTTCARVLRGHHGPVNAVRFNAKGTYVMTCGQDKTVRLWNPHRDGLD------APG---DALLVKTYEGRHGYDVQDVAIAHDNSKFASCGRDKAVFLWDVPTAKVIRKFEGHEHSVNCVRYNGDSAVLLSGSYDKTIRAWDMRARNAYLPIQVIDDFKDSVTSM--VVSDHEITAGCVDGIVRTFDLRAGMVYREHIEEPVVSVSLSPDARFLLASCLDGSIRLIEKESGQETKRYQGHRMDAYRIESCFSSDGAFVLS-----GSEDGKVYTWDLVTARIESF-HAHGKPIRALASHPELPLLVTGCIDGSAKVW 305
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Match: A0A836CAS4_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAS4_9STRA) HSP 1 Score: 285 bits (729), Expect = 4.740e-90 Identity = 148/316 (46.84%), Postives = 196/316 (62.03%), Query Frame = 3
Query: 96 LAREPIRQLSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDP-------DKEGRARAPGQLEEGLLVKSYAGPHGYEILDIALLNDNSKFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSNEGSVLFTASYDKTVRAWDMRSKNRMPIQVIEGCKDSATSVSSTPSGDEIVVGCVDGRVHTYDLRAAKVHQDDVHAPVTHASVSHDGNCLLVTCLGGI-LRLLEKGS--------GAQLNAYTGHTHDSYRMESWLTNTDAHVISVSDIEGSEDGAVYIWDIVQANVVSILRHHTRLVCSLSYHP 995
L +P R AG+GP ++ R T DGKY +T GQDRTVRL+NPH+ DP A + LE L++K+Y G HG+EI D+A+ DNSK SCG D+AA +WDV+TGA+ R++ H+ +NAC + + +VL T SYD+TVRAWD+R+ R P+QV+EG +DS TS+ P G IV G VDGRV TYD RAA + +DD PVT + SHDG C+L +CLG LRLLE+G AQL AY GH H Y + + + D+HV+S S EDG V WD+V V + LR H R +++ HP
Sbjct: 4 LPSKPTRVAKAGEGPLYIARLTADGKYLLTGGQDRTVRLWNPHKPDPAAXXXXXXXXXXATSDEPLEAALMIKAYGGGHGHEICDLAVAADNSKVASCGGDRAAVVWDVATGAL-RKLPAHDAAVNACAATADFAVLLTGSYDRTVRAWDLRAHGRAPVQVLEGARDSITSLLVLPCG-AIVAGSVDGRVRTYDARAAALIEDDCREPVTCVAASHDGKCVLASCLGSATLRLLERGGXXXXXXXXSAQLAAYRGHAHARYPLRTAFSADDSHVLSCS-----EDGDVVAWDLVTGAVAARLRRHARPTSAIAAHP 312
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Match: A0A067C3B9_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C3B9_SAPPC) HSP 1 Score: 281 bits (719), Expect = 2.350e-89 Identity = 151/318 (47.48%), Postives = 196/318 (61.64%), Query Frame = 3
Query: 105 EPIRQLSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDPDKEGRARAPGQLEEGLLVKSYAGPHGYEILDIALLNDNSKFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSNEGSVLFTASYDKTVRAWDMRSKNRM-PIQVIEGCKDSATSVSSTPSGDEIVVGCVDGRVHTYDLRAAKVHQDDVHAPVTHASVSHDGNCLLVTCLGGILRLLEKGSGAQLNAYTGHTHDSYRMESWLTNTDAHVISVSDIEGSEDGAVYIWDIVQANVVS--ILRHHT-RLVCSLSYHPSESMLLTASYDGTAVLW 1046
E R L GP VRF G YC++ G DRT++L+NPHR + E LVKSY G HGYE+ D+A+ +DN+KFVSCG DKA F WDV+TG VVR++ GH +NA ++++ SV+ +ASYD TVR WDMRS+N PIQV++ KDS TSV T EI+ GCVDG V YDLRA + QD++H+PV +S D NC++V+ L + L E SG +LNA+ GH SY +E T DAH+IS GSEDG V +WD++ A S L H + V S+ HP+E MLLTAS D T +W
Sbjct: 7 ECTRVLRGHVGPVIAVRFNDKGTYCMSCGNDRTIKLWNPHRDGLEGP---------ESAFLVKSYTGLHGYEVRDVAIEHDNAKFVSCGRDKAIFQWDVATGKVVRKLDGHSHSVNAVEYNDDCSVVASASYDSTVRLWDMRSRNSFAPIQVLDHFKDSVTSVKMTDH--EIITGCVDGYVRCYDLRAGLLTQDNLHSPVVSLQLSSDLNCIVVSTLAKRVVLFEAASGTELNAFEGHALSSYGVECGFTFDDAHIIS-----GSEDGRVLVWDMLHATDASRSFLAHAANKPVRSVVSHPTEDMLLTASIDSTVKVW 308
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Match: A0A8K1FM24_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM24_PYTOL) HSP 1 Score: 280 bits (716), Expect = 5.490e-89 Identity = 140/322 (43.48%), Postives = 202/322 (62.73%), Query Frame = 3
Query: 84 VPMELAREPIRQLSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDPDKEGRARAPGQLEEGLLVKSYAGPHGYEILDIALLNDNSKFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSNEGSVLFTASYDKTVRAWDMRSKNR-MPIQVIEGCKDSATSVSSTPSGDEIVVGCVDGRVHTYDLRAAKVHQDDVHAPVTHASVSHDGNCLLVTCLGGILRLLEKGSGAQLNAYTGHTHDSYRMESWLTNTDAHVISVSDIEGSEDGAVYIWDIVQANVVSILRHHTRLVCSLSYHPSESMLLTASYDGTAVLW 1046
+P + + +R L GP VRF G Y +T GQD+T+RL+NPHR +++G +GLL+K+Y G HGY++ D+A+ DNSKF SCG DKA F+WDV TG V+R+ +GH+Q +N ++ +GSVL + SYDKTVR WD+R++N +PIQ ++ KDS TS+ S EIV GCVDG V T+DLRA KV +D + PV ++S D LL + L G LRL+++GSG ++ +Y GH DSY++E T +V+S GSEDG + WD+V + + H + V +L+ HP E+ML+T G+ +W
Sbjct: 1 MPAPVPSQCVRVLRGHHGPVNAVRFNEKGTYVMTCGQDKTIRLWNPHRDGLEQQG---------DGLLIKTYQGRHGYDVQDVAIAADNSKFASCGRDKAVFMWDVPTGKVIRKFEGHDQSVNCVRYNADGSVLLSGSYDKTVRCWDIRARNSYLPIQTLDEFKDSVTSL--VVSDHEIVAGCVDGVVRTFDLRAGKVFRDQIDEPVVSIALSTDRQQLLASSLDGSLRLIDRGSGTEMKSYRGHRIDSYKIECAFTFDGGYVVS-----GSEDGQICSWDLVNGRMQTF-HAHGKPVRALACHPEEAMLVTGCVVGSVKVW 305
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Match: A0A484DRX5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRX5_BRELC) HSP 1 Score: 275 bits (704), Expect = 3.760e-87 Identity = 134/313 (42.81%), Postives = 195/313 (62.30%), Query Frame = 3
Query: 111 IRQLSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDPDKEGRARAPGQLEEGLLVKSYAGPHGYEILDIALLNDNSKFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSNEGSVLFTASYDKTVRAWDMRSKNR-MPIQVIEGCKDSATSVSSTPSGDEIVVGCVDGRVHTYDLRAAKVHQDDVHAPVTHASVSHDGNCLLVTCLGGILRLLEKGSGAQLNAYTGHTHDSYRMESWLTNTDAHVISVSDIEGSEDGAVYIWDIVQANVVSILRHHTRLVCSLSYHPSESMLLTASYDGTAVLW 1046
IR+L GP +RF G Y +T GQD+T++L+NPHR +K ++ LLVK+Y G HGY++ D+ + DNSKF SCG D+A F+WDV T V+R+ +GHE +N F+ SVL + SYDKTVRAWD+R++N MPIQ+++ +DS TS+ T EIV GCVDG V TYDLRA ++ ++ ++ PV + S D +L CL G +RL+EK +G ++ ++ GH +Y++E ++++ A V+S GSEDG VY WD+V + H + V +L YHP SML+T DG+ +W
Sbjct: 11 IRELHGHHGPINSIRFNSKGTYVMTCGQDKTIKLWNPHRDCEEKP---------KQALLVKTYEGRHGYDVQDVTIARDNSKFASCGRDRAVFMWDVQTAKVIRKFEGHEHSVNCVQFNAYSSVLLSGSYDKTVRAWDIRARNAYMPIQILDDFRDSVTSMVVTDH--EIVAGCVDGIVRTYDLRAGQLFREHINEPVVSVTQSPDARFILAGCLDGSIRLIEKVNGREIKSFRGHIVQNYKIECTISSSGAFVLS-----GSEDGKVYWWDLVDEKCRNSFSAHAKPVRALGYHPEGSMLVTGCVDGSGKVW 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig290.7903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig290.7903.1 >prot_H-paniculata_contig290.7903.1 ID=prot_H-paniculata_contig290.7903.1|Name=mRNA_H-paniculata_contig290.7903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=322bp MELAREPIRQLSAGQGPCFVVRFTGDGKYCVTAGQDRTVRLYNPHRGDPDback to top mRNA from alignment at H-paniculata_contig290:19524..25252+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig290.7903.1 ID=mRNA_H-paniculata_contig290.7903.1|Name=mRNA_H-paniculata_contig290.7903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5729bp|location=Sequence derived from alignment at H-paniculata_contig290:19524..25252+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig290:19524..25252+ >mRNA_H-paniculata_contig290.7903.1 ID=mRNA_H-paniculata_contig290.7903.1|Name=mRNA_H-paniculata_contig290.7903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at H-paniculata_contig290:19524..25252+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |