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Homology
BLAST of mRNA_H-paniculata_contig10094.79.1 vs. uniprot
Match: D7FPM2_ECTSI (Myst-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM2_ECTSI) HSP 1 Score: 142 bits (358), Expect = 1.410e-34 Identity = 88/172 (51.16%), Postives = 107/172 (62.21%), Query Frame = 1
Query: 1 DITVPDYLRMDPFGRDSAGRLYYRFNQFWKEMRVYRTVEGYSSIPAIDDVAIDMAN---VRAPEPTSINLKHQRLRGASEMELVADDIDGMHKLAKALGRSKSDKEDDDATLKTFLVKEVAIMKTYIAEIEEKDEKRKAA-EANREKRALLAMAPRRRSGRLTRGESGRAEA 504
D PD+LR PFG DS GRLYYRF F KEMRVYRTVEG S IP +D VA ++ + A + + K RLRG SE+ELVAD ++GM +L ALG+SKS + DDA L T L +EV M T++ E EK+EKR+ A EA RRRSGRL R E+G A A
Sbjct: 1037 DEVYPDWLRATPFGHDSCGRLYYRFIHFRKEMRVYRTVEGDSPIPPVDKVATELTGCGTLEAAAEAAADRKPSRLRGGSELELVADSLEGMERLLAALGKSKSKSKRDDAALHTNLAQEVEEMGTWVRESMEKEEKRRLADEAXXXXXXXXXXXXRRRSGRLIRAEAGWAVA 1208
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 134.4 |
| Seed ortholog evalue | 7.6e-29 |
| Seed eggNOG ortholog | 2880.D7FPM2 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | peripheral T cell tolerance induction |
| EggNOG OGs | COG0553@1,KOG0383@2759 |
| COG Functional cat. | KL |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 5 |
| Model size | 823 |
| Cds size | 795 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10094.79.1 >prot_H-paniculata_contig10094.79.1 ID=prot_H-paniculata_contig10094.79.1|Name=mRNA_H-paniculata_contig10094.79.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=265bp
MDPFGRDSAGRLYYRFNQFWKEMRVYRTVEGYSSIPAIDDVAIDMANVRA
PEPTSINLKHQRLRGASEMELVADDIDGMHKLAKALGRSKSDKEDDDATL
KTFLVKEVAIMKTYIAEIEEKDEKRKAAEANREKRALLAMAPRRRSGRLT
RGESGRAEAKPEEEKADDMYAFSYPPRSPTRPVRGSDEAVFSAGFDVPET
AAAECTRGSVGGGDDDRGIIDDGNGAGIDNMVVTAGAVDERPTATTLSNG
LPAASAALEEGEQAE back to topmRNA from alignment at H-paniculata_contig10094:3568..8868- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10094.79.1 ID=mRNA_H-paniculata_contig10094.79.1|Name=mRNA_H-paniculata_contig10094.79.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5301bp|location=Sequence derived from alignment at H-paniculata_contig10094:3568..8868- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATATAACCGTGCCGGATTATTTGAGGATGGATCCCTTCGGTCGCGACAG
TGCAGGGAGGCTATACTACCGCTTTAATCAGTTCTGGAAGGAAATGAGGG
TATATCGGTGAGAGAGAAACGGAGGGACAGAGAGGCATGTGTACAACGAG
GGACAAAAATAGGGCAGGTTCGCCTGGCAAATTTGTGTAGTATTCCTAAG
GTGTTGGATTGTCGTGAAAATTTCAGAATCTTGATGAACGTTTATGCCTG
TATACAAGTGTATGCGAGCGGGTGTGCGTGGGTCATGTCGTGGGTTGTGG
ATGATAAGTGTTACAAATGAATAGTAGGGCAACGCTTGATTCTTGTGGTA
GTACCTTTTTGTCGACAGCGAGACAGCGAGACAGATAGAGACAAGAAGAG
GTACAGGGAGAGACAAAGAGGCAAGAGACCGAGGGATAGGGAGACAGGGA
GACAGAGAGACAGATAAAATGTGTGGAAGCTCGTATGATCCCCCCCCCTT
CTCCGTGCGTGCGAACATTGATAATTCAATCAGACAAGTCCCTTCCCTTC
CTCGTGCCACCCCTTACCACTTCACATCCCGCTTCGCGTCACTTCGACTA
CCCGTTGGAAAACAAAATAATGCCATCTGTCCAGCACGGTGGAGGGGTAC
AGCTCCATACCGGCGATAGACGACGTTGCCATCGATATGGCCAACGTTAG
GGCGCCGGAGCCGACGTCAATCAACCTTAAACATCAGCGATTAAGGGGCG
CGTCCGAGGCGAGTGTTTACACGCCGCGTTTTGGAGGGGGCGGGGAGGGC
GGGCGGGCGGGCGGGCGGGCGGGGGTGGGCAATGGTAGTAAGCACGAATA
TGTCATGTACATACGTGTAACAAAATCTCGCAAAAAGAAACTCATTTGAT
TGTCAATTTGTAGGGTGGGATAGTGGTGTATGCATTGACTGTGCTGAGGG
TCATGCAGCTTTTCACCTCCCGGACAAATACGAATGCTTGCAAATGATTT
TCACAAAAAACTGAAAGTATTCGCTTGAGTTTTCAGAATGAGCTCGTGTT
TTCCATGTGCCCCCGACCATCCACGACTGCTAATAAATACTCGTAAATCG
AATGGACAGGGGGGTGGGTACTTTGTTCTATGTGTCCGCTCATTCTGAAA
CTCGGGCGATTTTTATTTTTTATTTTTGTGAAGAAAATTTGCAAGTATTT
GTATTTGTCAGGGGGGTGCAGCTTTTATTTTAAGGCATCAGTGTATACTG
AAAAAAAATAGAAAAAGTATGGGTGCTTCTTGTTACCGGGGAGAAGCATA
CTAATAATAGTAATGTAGTATAGTATATTATTTGATGGAGACATGACAAT
AGAACATACCCAGTGTAAATATCAGAAAAGTTCTTACCTCGGTCTCCTGG
GGATTAAAAAGGAAGTATGTATATAGTGCTGTATTCACCCGACTTGAGGT
AATGTAGTGATGACATCGCAAGCGTTGAGGTTTAGGTAGTGTTTTTAAGC
CCTTTAGCGTAACCATATGATAACGGTTTCTTTTAATGAGCATGTACGAA
ACATATGTGTCAACGGTAAGAAAACCACCCCCATCTCTTTAGGCATTGAA
CGGGTCGAATACTATAGTACATTTGAATACACACGAGAGAAGGGTATATA
TAGATATATTTAGTTAGATTGATGGCCTTGATATGATTGAAGTTTGTCAA
GTATGGATTTAATGTACTCTCTGTTGCAAGGTTGTTCGAGACCTACTCCG
GCACGTGTATACGATGTCCACCTCCTCCGGGTTTACTCTGTCCCGCTCGG
TCGTCGTTTGATCGGTGTGTGCGCGTATGTGCGTGTTTGTTTCTCAGATG
GAATTAGTTGCGGATGATATCGACGGAATGCACAAGCTGGCAAAGGCGCT
CGGTAGATCGAAGTCTGACAAAGAGGACGACGACGCCACGCTCAAGACAT
TTCTCGTTAAGGTATGCCTGAGTTTCCGCAAAACATGCGTCATTTATGTT
CGTTATTCATTTCGTTATATTGTATGAGTGTGTGTGTGTGTGTGTGTGTG
TTTCTTCTTATTCGACGTTGTTGCGTGGTTTGCGGTTTGCCTTGACGTCC
CATGTTCATTTTTAGTACCGTAAGGCCGCATCTTTTTTCTTTATTTTTTT
TACCCCCCACAAGGCTAAGGCAAAAACCTTTACCGATGTTTCCATACTTG
AGTATTTTACCAAATTATTTCTACATTTCCTTTAACAGAACAGAGATATT
TATTCCTCTGCGGGGTAGGCGCCACATCGGTTCGGCCAAACCAAGTAGGC
AGTGTGGGGGTTGCGTCCACTAAAAGACTTCTGACTAGATTTCCAGTCAT
GCTCAGTTCACGAGCTACCCTACCCGTTCGGGCGTAGGTCCGTGAAGGCC
ACATCTTATAGGCGTTAGAAACTTGCCTGGGAAACATTTTTTTTTTTTTT
TCCCATTTTTCCAAACCATCCATGATGGGAGCTTTTTTTCGTCCGATGTT
ATTTAAGAAAAATTCGGACGACCGCAAGATCGAGCAGCATCTCATTGATT
TTTTTTGCCAGGCATTGAACGCGTATATCCGAACCGTTTTATTTGTTGGT
TTCGCGGAGAATGACTCGTGTAGCGGCATTTGTCAGTACAGACAGTCCGT
GAGACAGTCTCTCTGCAGTCTTTACACAAGAAATCAGCCCAGCCAGTGAT
GCTCGAAAGTAGTATTGCAACCGCATAGCACCAGAACGTCCCCTCTCTCC
CACGCGTTGTATGTACCGGGTGGCTTGCTCCCTATCAATATGATGGATAT
ATTTTTTGGGATTTTGCCATCAGGTAGCAGCTCAACATGAGGTGTGGTTC
GTACATTTTTTCGCGTTGGACAATTAATTCCCCGTACATTTTTTTTTCTT
TTTTTTTTCGAAAATCAAATTTTGGACGCCTCAAGATGCGGCTTACGCTA
AAACTGAACACATGGAAAATGCAGGACAATAATCGAAGGGTACACTGGCT
GTTGCCTCTTTGTTTTGAGTCATAATTCAAGGAAACCAACTCATTGTAAA
CGCCTCTCTCTCCCAGTCCCTGCCCGGCTAGCGCTCGATACGTTGACACC
GCACCTGTTCCCACTCCTCGAATCTAGTTCATTCTGGGGGAGGGGGGGGG
GAGGAGGTTCAAAACGAAACAATTCTTTTCTTTTTTGCGTCGCTCGCAGG
AGGTGGCGATTATGAAAACGTACATCGCTGAGATAGAGGAGAAGGACGAG
AAGCGAAAGGCGGCCGAGGCGAATCGAGAGAAGCGCGCTCTGCTGGCGAT
GGCACCCAGGAGACGGAGCGGCCGCTTGACTGTGAGTTGGTTGAGATCGG
TATTCATATATATATATTAAAGGCTGCGGTAGTAACGCTTGACTGTGAGT
TGGTTGAGATCGGTATTCATATATATATTTTAAAGGCTGCGGTAGTAACT
TTTTTTAGACGGTGCAGCGTACGGGGAGATTAAGTTATTATGGGGCTTTT
CGATTTTTCTTCTTTTTGTCCTTTTTTAACGTTCATGAGGTACCGCATGG
GTGAACGGTTTGGCGTGATCCAAGTTATTTGGGAAAACCTTCGAGTCCCG
CCCAATTTCAATGCTTGCAATAACAAGAGCAGACGTAAGTCTTCTCTCGT
ATTTGTAGAGAAAACCCTTGATCTCCGCGGAAAAATACGAACGGAGCATT
CGCAACTATTTTGAACTATCATTATTTGTCTTGGGAAGACACGTATTTGT
TGGTTTACAAGTCTATTAATGGTCACTCTACAGATGGTTACCAGGTGGTC
GTGTATCTGGTGAACCGTCACAAATGCAGATCCTGTTTGTTTTCCGGATT
GTACTGTACAGATTGAATACTCTTATCTGTCTGAGCTTTTCGATGCTCCA
TGGTATATTGAGTACAATGCATATTATTCGCGTCACATGGACATCTCTCC
CCCAGCTCAAAACAGATACAGTATTCGTTTCAGCTTTCTCGTATTTATTC
GTGTCTTGTATTCGTATTTGTCCGGGGCGTGAAACCCTTACCGTATGTTG
GCAAAATTTCACCCATCCCCCGGACGAACCGAATAGTTTTAGACAGAAGT
TTTTCGATTTTTCGCCTCAGGGTTCAGCGTGAGCATGTTTAGTCTAGATG
CCCTGCCTGGACTATCTGTGCCTGCGGCAAATAAGAGTGAAACATAATAC
ATTGGCCCTGCGTCATCTACCCACGACTGCGGCGAATACTATTTGTTGAA
GAACTTTCGATATTTTGTCTAAACCATTCAAATTGTTCGTACTGCATAGT
TTGCACATCTAACCGCGATGAGCCTGATACGCGAGTCGCGCCAGAGATCC
AAACAATTGTGTCGGGAAATGGGCCCGACTTGTCATTACCTCTGATGTTT
AAAGGGGGGGTATATTGCACTGTTACTGGCCTGTACTAGAGTTCAAGTGT
TACCCACCCTAACTGAGAGGGCTGGGGATATTGGAGGGTCTGTTTGATGT
CCTCTTAGGACTACCCTCACCTTTTATCTGTACCCCTGCGGCTTTTGATT
ATGCGAAATGTGCAGGCAGGTTATTTTGGCACGCCAGTCTGATCGCTCAG
GCTCGCGATCGGAGTATACGAGTTCCTACAACGAAAAACAGCCTAACCAA
GCGTTAATGTTATGCTCTCGCCCAGGAAATACTACCGTTGCGTCCGTGGC
AAAGGGTATGACCGTGTGGTACTTATCCACTGCCTCAAGACGTTGGGCAC
ACCGTGTTTAAATCTTTTCGCCATATTCTCCTCTTGGCCATGTTTCACTA
CTTGCTTCAACGTTCAATCAGCCATATGAGCTGCCTGCGGTCAGCACCGA
GAAGATACTTAATACCATGCACATCCGCCAAACTATTGCCATGTTTTTCT
CCATGCTTCTGACGACCCTCCCCCCCTCCTTTGTCACCCGTTTCCCGCCG
CGGAAGAGAGGTGAGTCTGGACGGGCAGAAGCTAAGCCAGAAGAGGAAAA
GGCAGACGACATGTACGCGTTTTCTTATCCTCCTCGCTCGCCCACACGTC
CCGTTCGTGGCAGCGATGAGGCGGTGTTCTCGGCCGGCTTCGACGTTCCG
GAGACCGCTGCTGCGGAATGCACTCGCGGCAGCGTCGGCGGCGGAGATGA
CGACCGTGGTATTATTGATGATGGTAATGGTGCTGGCATTGACAATATGG
TCGTCACAGCTGGTGCCGTCGACGAGCGGCCCACTGCAACAACGCTCTCT
AACGGCCTGCCTGCGGCTTCAGCGGCTTTGGAAGAGGGGGAACAAGCAGA
G back to topCoding sequence (CDS) from alignment at H-paniculata_contig10094:3568..8868- >mRNA_H-paniculata_contig10094.79.1 ID=mRNA_H-paniculata_contig10094.79.1|Name=mRNA_H-paniculata_contig10094.79.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1590bp|location=Sequence derived from alignment at H-paniculata_contig10094:3568..8868- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATCCCTTCGGTCGCGACAGTGCAGGGAGGCTATACTACCGCTTTAA
TCAGTTCTGGAAGGAAATGAGGGTATATCGATGGATCCCTTCGGTCGCGA
CAGTGCAGGGAGGCTATACTACCGCTTTAATCAGTTCTGGAAGGAAATGA
GGGTATATCGCACGGTGGAGGGGTACAGCTCCATACCGGCGATAGACGAC
GTTGCCATCGATATGGCCAACGTTAGGGCGCCGGAGCCGACGTCAATCAA
CCTTAAACATCAGCGATTAAGGGGCGCGTCCGAGCACGGTGGAGGGGTAC
AGCTCCATACCGGCGATAGACGACGTTGCCATCGATATGGCCAACGTTAG
GGCGCCGGAGCCGACGTCAATCAACCTTAAACATCAGCGATTAAGGGGCG
CGTCCGAGATGGAATTAGTTGCGGATGATATCGACGGAATGCACAAGCTG
GCAAAGGCGCTCGGTAGATCGAAGTCTGACAAAGAGGACGACGACGCCAC
GCTCAAGACATTTCTCGTTAAGATGGAATTAGTTGCGGATGATATCGACG
GAATGCACAAGCTGGCAAAGGCGCTCGGTAGATCGAAGTCTGACAAAGAG
GACGACGACGCCACGCTCAAGACATTTCTCGTTAAGGAGGTGGCGATTAT
GAAAACGTACATCGCTGAGATAGAGGAGAAGGACGAGAAGCGAAAGGCGG
CCGAGGCGAATCGAGAGAAGCGCGCTCTGCTGGCGATGGCACCCAGGAGA
CGGAGCGGCCGCTTGACTGAGGTGGCGATTATGAAAACGTACATCGCTGA
GATAGAGGAGAAGGACGAGAAGCGAAAGGCGGCCGAGGCGAATCGAGAGA
AGCGCGCTCTGCTGGCGATGGCACCCAGGAGACGGAGCGGCCGCTTGACT
AGAGGTGAGTCTGGACGGGCAGAAGCTAAGCCAGAAGAGGAAAAGGCAGA
CGACATGTACGCGTTTTCTTATCCTCCTCGCTCGCCCACACGTCCCGTTC
GTGGCAGCGATGAGGCGGTGTTCTCGGCCGGCTTCGACGTTCCGGAGACC
GCTGCTGCGGAATGCACTCGCGGCAGCGTCGGCGGCGGAGATGACGACCG
TGGTATTATTGATGATGGTAATGGTGCTGGCATTGACAATATGGTCGTCA
CAGCTGGTGCCGTCGACGAGCGGCCCACTGCAACAACGCTCTCTAACGGC
CTGCCTGCGGCTTCAGCGGCTTTGGAAGAGGGGGAACAAGCAGAGAGAGG
TGAGTCTGGACGGGCAGAAGCTAAGCCAGAAGAGGAAAAGGCAGACGACA
TGTACGCGTTTTCTTATCCTCCTCGCTCGCCCACACGTCCCGTTCGTGGC
AGCGATGAGGCGGTGTTCTCGGCCGGCTTCGACGTTCCGGAGACCGCTGC
TGCGGAATGCACTCGCGGCAGCGTCGGCGGCGGAGATGACGACCGTGGTA
TTATTGATGATGGTAATGGTGCTGGCATTGACAATATGGTCGTCACAGCT
GGTGCCGTCGACGAGCGGCCCACTGCAACAACGCTCTCTAACGGCCTGCC
TGCGGCTTCAGCGGCTTTGGAAGAGGGGGAACAAGCAGAG back to top
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