prot_H-paniculata_contig2899.7898.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig2899.7898.1
Unique Name	prot_H-paniculata_contig2899.7898.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	722

Homology

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BLAST of mRNA_H-paniculata_contig2899.7898.1 vs. uniprot
Match: D8LJV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV6_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 7.250e-89
Identity = 171/307 (55.70%), Postives = 211/307 (68.73%), Query Frame = 0

Query:  438 TGRYPSTDKESFARTLNEEELDEVWRGLGEGVSQRGAGSDVG--FDIADG-PSSPNGTVVSGAFPKLTANVLQRFELLAGGPGVEMKDGGSGPV-----NVMPLPKGVNDEKMLRDMEAGTRSSKKSSSGSSGSQPVS--------LLATLVSYGVLVLWMAHLVFNVLMLWPIVPDTPLWGLCVVPGLFGMLLSVGTVRRGHR-CKPENAP-VDNERRRTG-----PHPCSLPAYMLLVVSVVVALGMHTSALLYCEKDMQLFLNEATAEPLCDEPSLLLAVVFDVIILSVAGLNASGQCWSWVLS 721
            +GR+PS D+ESFARTLN EELDEVW+GLGEGVSQRG GS+VG  FD+AD  P SPNGT VSGAFPKLTANVL+R + LA                    NV+P+PK +  E+   DME GT SSKKSS   +G+QP S        LL  +VSYGVLVLW+ HLVFNVL+LW +V D  +W LC +PG+ G+LLSV + R+ HR CKP NA     +RR+ G     PH C+LPA+ LL+++VVV LG+H SALL+CEKDM L   E T +PLCD+ SL L ++ D I+LSVA L AS  CW+WVL+
Sbjct:   80 SGRFPSHDRESFARTLNNEELDEVWKGLGEGVSQRGCGSEVGVGFDLADTTPPSPNGTGVSGAFPKLTANVLERHDQLADDXXXXXXXXXXXXXXXXXXNVVPIPKKLM-ERSAEDMENGT-SSKKSSGNGNGNQPASGVQQQEKTLLGAIVSYGVLVLWVGHLVFNVLLLWRVVADEQVWALCFLPGVLGILLSVNSCRKSHRRCKPLNADDAQTQRRQRGRERSAPHACALPAHTLLLLAVVVCLGLHASALLFCEKDMLLVFEEETLDPLCDDSSLALPLILDAIVLSVASLKASSLCWAWVLN 384

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BLAST of mRNA_H-paniculata_contig2899.7898.1 vs. uniprot
Match: A0A6H5JGU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU1_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 8.940e-83
Identity = 169/305 (55.41%), Postives = 206/305 (67.54%), Query Frame = 0

Query:  438 TGRYPSTDKESFARTLNEEELDEVWRGLGEGVSQRGAGSDVGF--DIADG-PSSPNGTVVSGAFPKLTANVLQRFELLAGGPGVEMKDGGSGP---VNVMPLPKGVNDEKMLRDMEAGTRSSKKSSSGSSGSQPVS--------LLATLVSYGVLVLWMAHLVFNVLMLWPIVPDTPLWGLCVVPGLFGMLLSVGTVRRGHR-CKPENAP-VDNERRRTG-----PHPCSLPAYMLLVVSVVVALGMHTSALLYCEKDMQLFLNEATAEPLCDEPSLLLAVVFDVIILSVAGLNASGQCWSWVLS 721
            +GR+PS D+ESFARTLN+EELDEVW GLGEGVSQRG GS+VG   D+AD  P SPNGT VSGAFPKLTANVL+R + LA                  NV+P+PK +  E+   DME GT SSKKSS   SG+QP S        LL  + SYGVLVLW+AHLVFNVL+LW +V D  +W LC VPG+ G+LLSV   R+ HR CKP N      ++R+ G     PH CSLP + LL+++VVV LG+H SA L+CEKDM L   E T +PLCD+ SL L ++ D I+LSVA L AS  CW+WVL+
Sbjct:  409 SGRFPSHDRESFARTLNDEELDEVWNGLGEGVSQRGCGSEVGVGVDLADTTPPSPNGTGVSGAFPKLTANVLERHDQLADDXXXXXXXXXXXXXXAANVVPIPKQLM-ERSAEDMENGT-SSKKSSGNGSGNQPASGVQQQEKTLLGAIASYGVLVLWVAHLVFNVLLLWRVVADEQVWALCFVPGVLGILLSVNRCRKSHRHCKPLNTDDAQTQQRQQGLGRSAPHACSLPVHTLLLLAVVVCLGLHASAFLFCEKDMLLVFEEETLDPLCDDSSLTLPLILDGIVLSVASLKASSLCWAWVLN 711

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2899.7898.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2899.7898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LJV6_ECTSI	7.250e-89	55.70	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JGU1_9PHAE	8.940e-83	55.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 596..600
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 712..721
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 647..670
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 621..646
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 568..595
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 693..711
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..567
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 671..692
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 601..620
None	No IPR available	TMHMM	TMhelix		coord: 649..671
None	No IPR available	TMHMM	TMhelix		coord: 572..594
None	No IPR available	TMHMM	TMhelix		coord: 692..714
None	No IPR available	TMHMM	TMhelix		coord: 601..620

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2899	contig	H-paniculata_contig2899:2350..7426 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2899.7898.1	mRNA_H-paniculata_contig2899.7898.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig2899 2067..7487 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig2899.7898.1 ID=prot_H-paniculata_contig2899.7898.1|Name=mRNA_H-paniculata_contig2899.7898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=722bp
MPPPKTMVSPVSSPTQVTMARKKDEERSPEKMFDSASTTAIETPSSPPQR
AAWSTIAPEKVPLHERVLPPTMEELEEMDLGRHMGEWDDSGKACLTPAGS
MTSTRSRTSSVSQTKQVSRQVSRVSGLGIPGIHHMNSDEKGPVRPGTALG
SRKPSRSPTRSPMQLPAHSPPLRRLELQTMTPSAGIDRSSRKPREEPGPR
HRPNPQTRLSPVDLTKPSTQEPEPQHRLQDGTYAPAAVGGSARGTSNEGR
KVGVRRGPPLTQTGNNSQQRLRRNVPPAYGTPSSTQDRSKKPEHTAATAG
GVDSDYNNQLIRRVGSGDINPGRREGNINGHARKPLRRRSISAPDLSGAD
FAEFIEVAEEDEEIATAKDGEGQGINGEPAETKSPNGSSPSQAVWGGGLP
PKRSMIAQGPAAARVVAARAPVSSGRFQQHSGTRRPSTGRYPSTDKESFA
RTLNEEELDEVWRGLGEGVSQRGAGSDVGFDIADGPSSPNGTVVSGAFPK
LTANVLQRFELLAGGPGVEMKDGGSGPVNVMPLPKGVNDEKMLRDMEAGT
RSSKKSSSGSSGSQPVSLLATLVSYGVLVLWMAHLVFNVLMLWPIVPDTP
LWGLCVVPGLFGMLLSVGTVRRGHRCKPENAPVDNERRRTGPHPCSLPAY
MLLVVSVVVALGMHTSALLYCEKDMQLFLNEATAEPLCDEPSLLLAVVFD
VIILSVAGLNASGQCWSWVLS*