prot_H-paniculata_contig2896.7893.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2896.7893.1
Unique Nameprot_H-paniculata_contig2896.7893.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length297
Homology
BLAST of mRNA_H-paniculata_contig2896.7893.1 vs. uniprot
Match: D7FII9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII9_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 4.430e-75
Identity = 126/199 (63.32%), Postives = 154/199 (77.39%), Query Frame = 0
Query:  105 GGGEAGEDNPELVKEFYSEVASRWNTTVEG--------AIEVEKGLQFDRAIYDELRERRDYGFEQDLGLELEKRNITQEMRARKRDINDGLESLPGVSSTTTIVPSAELTPRDVISAVLEALKNNDHPYHNHGVEMFIRFLAPSSAMHGVEMEGVARYLAENRNRAMMHWDAVAYPRPLTLSGGKKKNKAFQRLQLKD 295
            GG E  +D  EL K FYSE+A+R   T +G        A + + G        DELR RRD+GFEQDLGLELEKRNIT+E  A+K  I+ GLE +PGV+S+ T +PS+ELTPR+V+++VLEALKNND PYHNHGVE+FIRFLAPSSAMHGVEM GVARYLAENRNRA MHW+ +A+PRPLT+SGG K+NKAFQ ++L+D
Sbjct:   83 GGAEEEDDTLELTKGFYSEIAARLGKTAQGQPQDSQETAKDEDSGSXXXXXXXDELRARRDFGFEQDLGLELEKRNITKEAEAKKI-IDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRD 280          
BLAST of mRNA_H-paniculata_contig2896.7893.1 vs. uniprot
Match: A0A7R9YD20_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD20_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.870e-10
Identity = 54/200 (27.00%), Postives = 100/200 (50.00%), Query Frame = 0
Query:  115 ELVKEFYSEVASRWNTTVEGAIEVEKGLQFDRAIYDELRERRDYGFEQDLGL----ELEKRNITQEM-----------RARKRDINDGLES--LPGVSSTTTIVPSAELTPRDVISAVLEALKNNDHPYHNHGVEMFIRFLAPSSAMHGVEMEGVARY---LAENRNRAMMHWDAVAYPRPLTLSGGKKKNKAFQRLQLK 294
            +  +EF+  V  R     EG       L  ++ IY+ LRER  +G E++        +E +N+T ++           RA +++I +   +  LP +   T+  P   LTP  V+ ++L+A++ ND PY NHG+E+  RF + +S+    +     +Y   + ++    ++ WDA+ + +PL  +G     KA Q++QL+
Sbjct:   54 DFTREFFESVKER-----EGG-----QLTEEKDIYNALRERMGFGVEEEFARVRQQRIEGKNVTGDLDASEELLKATLRAMEQNIAENATAGQLPDIKLPTS--PDPALTPGLVVMSILQAMRCNDSPYENHGIEVLTRFTSSASSATDTDEPSFRKYCDFIPKSEYGILLKWDAIRF-KPLEKAG----KKALQKIQLR 236          
BLAST of mRNA_H-paniculata_contig2896.7893.1 vs. uniprot
Match: A0A7S0K9M8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9M8_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.310e-5
Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 0
Query:   97 DGDMELELGGGEAGEDNPELVKEFYSEVASRWNTTVEGAIEVEKG--LQFDRAIYDELRERRDYGFEQDLGLELEKRNITQEMRARKRDINDGLESLPGVS---STTTI----VPSAELTPRDVISAVLEALKNNDHPYHNHGVEMFIRFLAPSSAMHGVE 248
            D D   + G  E GED+ + V+E  +   + +    EG +    G     ++ +YD L+ER            LE     Q++     + +DG  S  G S   S T +    VP AELT  +V++ VLEAL+NND+P  N GVE+   + + +S +  +E
Sbjct:  141 DPDKNSDKGVNEDGEDDDDYVREITASELNLFTGVDEGGVGKLAGNVTITNKELYDSLKER-----------VLESPTSFQKLTTGADESDDGTMSAIGDSIEQSKTYVPPKNVPDAELTAGEVVTVVLEALRNNDNPSTNRGVEILFAYSSSASILADLE 290          
BLAST of mRNA_H-paniculata_contig2896.7893.1 vs. uniprot
Match: A0A7S3WL80_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WL80_EMIHU)

HSP 1 Score: 53.1 bits (126), Expect = 4.020e-5
Identity = 34/102 (33.33%), Postives = 57/102 (55.88%), Query Frame = 0
Query:  198 TTIVPSAELTPRDVISAVLEAL--KNNDHPYHNHGVEMFIRFLAPSSA--MHGVEMEGVARYLAENRNRAMMHWDAVAYPRPLT-LSGGKKKNKAFQRLQLK 294
            T + PSA L+PR+VI++V+E+L   N D P   +G E+ +RFLAP+ A  +   +  G +RYL +      + W+   +   +  L+G     +AFQ + L+
Sbjct:   25 TNLKPSAALSPREVITSVMESLHRSNWDRPTECYGFEVAMRFLAPTHAAKLKKAKPTGFSRYLRQQHRIRFVKWNEYRFEGDVARLTGDDGVEEAFQMISLR 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2896.7893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FII9_ECTSI4.430e-7563.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YD20_9STRA9.870e-1027.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0K9M8_9STRA3.310e-530.43Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S3WL80_EMIHU4.020e-533.33Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2896contigH-paniculata_contig2896:6539..19052 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2896.7893.1mRNA_H-paniculata_contig2896.7893.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2896 6105..19640 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2896.7893.1 ID=prot_H-paniculata_contig2896.7893.1|Name=mRNA_H-paniculata_contig2896.7893.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
MTINNIASMKTPGVACVIGVILSSFIPANEAFVAVGGGEIRLLSSAGHRT
MTSSRSSSAWSHNPQGFSRNVAGLRHVGVVRPRSQITTTLGAAGAADGDM
ELELGGGEAGEDNPELVKEFYSEVASRWNTTVEGAIEVEKGLQFDRAIYD
ELRERRDYGFEQDLGLELEKRNITQEMRARKRDINDGLESLPGVSSTTTI
VPSAELTPRDVISAVLEALKNNDHPYHNHGVEMFIRFLAPSSAMHGVEME
GVARYLAENRNRAMMHWDAVAYPRPLTLSGGKKKNKAFQRLQLKDR*
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