mRNA_H-paniculata_contig2893.7888.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Match: A0A6H5JQ98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ98_9PHAE) HSP 1 Score: 370 bits (949), Expect = 1.760e-113 Identity = 197/272 (72.43%), Postives = 224/272 (82.35%), Query Frame = 1
Query: 370 MSAKAKPGAKE----VPKALGPDRVPENQKREVYERVRRAMDAKGSVCTQHKVGSSPWDDAEQKVLEEGLRYYPHEKHSNMLIYIRIAAGLPKKSVRDVAHHLRQMQ----DTFRAKMDPASLAVNANPAKRHHPDPAAAAAMAAMHDHQMAVIYAANAAGGMAAMHTLPPGLAPSMTGPGGPGPHLKDEKMEARIITILQENLALINSIRENVMMGRFFDNHGLMLTFDKNVKEFMALLATLPMGEIHKLPVQINPYFITGSPPYISGTGV 1161
M+A+ +P AKE V +ALG RVPENQKREVYERVRRAM+AK VCT HKVGSS WD+ EQ+VLE+GLRYY H++HSNMLIYIRIAAGLPKK+VRDVAHHLR MQ D RAK + A+ +N NPAKRHHPDP AAAAMAAMH+H MA ++AANAA GMAAM TLP GLAP + GP GPGPHLKDEK+EAR+ T+LQEN+ALINSIREN++MGRFFDNH LM+ FDKNVKE ALLATLP E+ KLPVQINPYFITGS P +G GV
Sbjct: 1 MAARGRPSAKEKEKEVERALGVHRVPENQKREVYERVRRAMEAKNGVCTSHKVGSSSWDENEQRVLEDGLRYYSHDQHSNMLIYIRIAAGLPKKTVRDVAHHLRHMQARSRDEHRAKPEAAAPGMN-NPAKRHHPDPGAAAAMAAMHEHHMAAMFAANAAAGMAAMQTLP-GLAPGLAGPSGPGPHLKDEKVEARVCTLLQENMALINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFAEMQKLPVQINPYFITGSLP--AGVGV 268
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Match: D7FV74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV74_ECTSI) HSP 1 Score: 161 bits (407), Expect = 1.410e-42 Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 1
Query: 370 MSAKAKPGAKEVPK----ALGPDRVPENQKREVYERVRRAMDAKGSVCTQHKVGSSPWDDAEQKVLEEGLRYYPHEKHSNMLIYIRIAAGLPKKSVRDVAHHLRQMQDTFRAKMDPASL 714
M+A+ +P AKE K ALG RVPENQKREVYERVRRAM+AK VCT HKVGSS WD EQ+VLE+GLRYYPH++HSNMLIYIRIAAGLPKK+VRDVAHHLR MQ R+++ PA L
Sbjct: 1 MAARGRPSAKEKDKEDARALGVHRVPENQKREVYERVRRAMEAKTGVCTSHKVGSSSWDKNEQRVLEDGLRYYPHDQHSNMLIYIRIAAGLPKKTVRDVAHHLRHMQ--ARSRVLPAGL 117
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Match: D7G053_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G053_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 7.470e-13 Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 1
Query: 955 LALINSIRENVMMGRFFDNHGLMLTFDKNVKEFMALLATLPMGEIHKLPVQ 1107
+ALINSIREN++MGRFFDNH LM+ FDKNVKE ALLATLP E+ KLPVQ
Sbjct: 1 MALINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFAEMQKLPVQ 51
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Match: A0A7S4A477_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A477_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 6.300e-9 Identity = 53/202 (26.24%), Postives = 81/202 (40.10%), Query Frame = 1
Query: 529 WDDAEQKVLEEGLRYYPHEKHSNMLIYIRIAAGLPKKSVRDVAHHLRQMQDTFRAKMDPASLAVNANPAKRHHPDPAAAAAMAAMHDHQMAVIYAANAAGGMAAMHTLPPGLAPSMTGPGGPGPHLKDEKMEARIITILQENLALINSIRENVMMGRFFDNHGLMLTFDKNVKE-FMALLATLPMGEIHKLPVQINPYFITG 1131
W +AEQK LE R YP +HS + +IAAGLP+KS+RDV LR + +DP + A A P H +E + +LQ+N+A+++ +REN+ + DN LM FD NV+ F L A ++ P+++N ++ G
Sbjct: 10 WTEAEQKQLETLARRYPSSEHSLVTQCAKIAAGLPRKSIRDVGARLRLLA------LDPLATAQPARPGTARH-------------------------------------------------------AALEKQCRDLLQQNVAVVSEMRENLHKIQLMDNIPLMRRFDANVRATFETLEALESEAQMPPFPLEVNTMYLAG 150
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Match: A0A421GWC8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GWC8_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 2.340e-6 Identity = 52/207 (25.12%), Postives = 89/207 (43.00%), Query Frame = 1
Query: 508 HKVGSSPWDDAEQKVLEEGLRYYPHEKHSNMLIYIRIAAGLPKKSVRDVAHHLRQM-----QDTFRAKMDPASLAVNANPAKRHHPDPAAAAAMAAMHDHQMAVIYAANAAGGMAAMHTLPPGLAPSMTGPGGPGPHLKDEKMEARIITILQENLALINSIRENVMMGRFFDNHGLMLTFDKNVKEFMALLATLPMGEIHKLPVQIN 1113
+ + W E ++L GL +P +++ N+ YI+IAA LP+K VRDVA+ ++ + Q A + N KR +P Y +A P+ TG E EAR+ +LQ+N+ IN++R N++ G+ +N M+ F N + ++ L + I LP+Q++
Sbjct: 36 YTTAQAAWTPQELQMLHAGLAQFPADQYDNVTRYIKIAATLPRKCVRDVAYKVKVLGYPSGQPAAAAASSTSQPTTNTGVTKRMKIEP-----------------YQESA------------NQPPASTG----------ELEEARLAALLQDNVLAINTMRTNLLNGKADENRTQMIKFRDNCQTVLSSLGDI-CTSIPPLPLQLD 202
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Match: A0A2D4BKW3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKW3_PYTIN) HSP 1 Score: 59.7 bits (143), Expect = 3.490e-6 Identity = 57/206 (27.67%), Postives = 93/206 (45.15%), Query Frame = 1
Query: 508 HKVGSSPWDDAEQKVLEEGLRYYPHEKHSNMLIYIRIAAGLPKKSVRDVAHHLRQMQDTFRAKMDPASLAVNANPAKRHHPDPAAAAAMAAMHDHQMAVIYAANAAGGMAAMHTLPPGLAPSMTGPGGPGPHLKDEKMEARIITILQENLALINSIRENVMMGRFFDNHGLMLTFDKNVKEFMA----LLATLPMGEIHKLPVQIN 1113
+ + W E ++L+ GL + E++ N+ YI+IAA +P K VRDVA ++ + A+ +++PA R + +M + +AA A T P L D A++ ILQ+N INS+R N++ GR DN +ML F N + F++ + ATLP LPV+++
Sbjct: 42 YSTAHATWTTHEMQLLQRGLTEFSAERYDNVTRYIKIAAMIPGKCVRDVAFKVKAL----------ATEKQSSSPADRE------------LFTKRMRIDHAA-------AETTATP---------------LSD----AQLAAILQDNALAINSMRNNLLNGRVADNRDVMLRFRGNCQTFVSAVNGICATLP-----PLPVKLD 194
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Match: A0A7S3UAD4_9CHLO (Hypothetical protein n=2 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UAD4_9CHLO) HSP 1 Score: 60.1 bits (144), Expect = 7.630e-6 Identity = 54/206 (26.21%), Postives = 87/206 (42.23%), Query Frame = 1
Query: 529 WDDAEQKVLEEGLRYYPHEKHSNMLIYIRIAAGLPKKSVRDVAHHLRQMQDTFRAKMDPASLAVNANPAKRHHPDPAAAAAMAAMHDHQMAVIYAANAAGGMAAMHTLPPGLAPSMT---------GPGGPGPHLKDEKMEARIITILQENLALINSIRENVMMGRFFDNHGLMLTFDKNVKEFMALLATLP--MGEIHKLPVQIN 1113
W D EQK LE+GL+ + K + ++ Y++IAA LP+K VRDVA +R +K S + + +PA + + + PPG P + G GG G +L ENL +I+ +R+N+ M +N L+ F N+ + + + P M ++ LPVQ+N
Sbjct: 103 WSDEEQKTLEQGLQRFSASKMTPLMRYVKIAALLPRKGVRDVALRVRWHNRRDNSKKKKTS---DGKKNDKKEKEPAKPSVFSMRPPVPNPTVN--------------PPGYLPQLPLPMEDHGADGVGGVG---------GATGQLLNENLRVIHLLRQNIAMNNMHENTELLGRFRDNILQILNKMGNTPGVMSQMPPLPVQLN 282
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Match: A0A6G0WS86_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WS86_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 2.040e-5 Identity = 56/204 (27.45%), Postives = 86/204 (42.16%), Query Frame = 1
Query: 508 HKVGSSPWDDAEQKVLEEGLRYYPHEKHSNMLIYIRIAAGLPKKSVRDVAHHLRQMQDTFRAKMDPASLAVNANPAKRHHPDPAAAAAMAAMHDHQMAVIYAANAAGGMAAMHTLPPGLAPSMTGPGGPGPHLKDEKM--EARIITILQENLALINSIRENVMMGRFFDNHGLMLTFDKNVKEFMALLATLPMGEIHKLPVQIN 1113
+ + W E +L +GL +P E++ N+ YI+IAA +P KS+RDVA+ +R M D + + N ++ H PA A +H H + P L P +K E + E I LQ+N +INSIR N+ G N LM F N + L+ + + + VQI+
Sbjct: 44 YSTAQAAWSPEELHLLHKGLTEFPSERYDNITRYIKIAATIPDKSIRDVAYKIRSM--------DKSVVGNNNQLPQQSHMLPAMAQVKRQKVEHND---------------HGMQP-LIPLT---------IKKETISSEDSIKKSLQDNANVINSIRANLASGELHHNFPLMAHFRDNCSVILKKLSAM-CSAVPPMSVQID 213
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Match: A0A8J9RTW0_9CHLO (Probable ribosome-binding protein 1 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RTW0_9CHLO) HSP 1 Score: 59.7 bits (143), Expect = 3.560e-5 Identity = 62/229 (27.07%), Postives = 105/229 (45.85%), Query Frame = 1
Query: 520 SSPWDDAEQKVLEEGLRYYPHEKHSNMLIYIRIAAGLPKKSVRDVAHHLRQMQDTFRAKMDPASLAVNANPAKRHH---------PDPAAAA---AMAAMHDHQMAVIYAANAAGGMAAMHTLPPGLAPSMTGPGG-----------PGPHLKDEK------MEARIITILQENLALINSIRENVMMGRFFDNHGLMLTFDKNVKEFMALLATLP--MGEIHKLPVQIN 1113
++ WD AEQ L+ L +P ++H + Y+R AA LPKK+VRDVA + ++ T A+ + N+ R P P A AMA+ MA + AN A MA+ +P AP + P G P P L D + + +L++N A++N ++N+ + +N L++ F N+ + + ++ M ++ LPV++N
Sbjct: 569 TTEWDSAEQAALDSALARFPADRHPPLERYVRAAACLPKKNVRDVALRVAWLRATAAARKRKMADEANSKKQVRRERGQSIFAVQPKPMGGAVGHAMASSVGVGMAGMPGANMA--MASGMPMP---APVVVQPHGMAYAQPVVPLAPMPQLDDHGAGTVGGVGGPLAQLLEQNYAILNQFKQNMAAYKVNENTELLVRFRDNILTVLNHMNSMQGVMQQMPPLPVRLN 792
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Match: K3WC33_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC33_GLOUD) HSP 1 Score: 56.2 bits (134), Expect = 4.060e-5 Identity = 54/200 (27.00%), Postives = 89/200 (44.50%), Query Frame = 1
Query: 529 WDDAEQKVLEEGLRYYPHEKHSNMLIYIRIAAGLPKKSVRDVAHHLRQMQDTFRAKMDPASLAVNANPAKRHHPDPAAAAAMAAMHDHQMAVIYAANAAGGMAAMHTLPPGLAPSMTGPGGPGPHLKDEKMEARIITILQENLALINSIRENVMMGRFFDNHGLMLTFDKNVKEFMALLATLPMGEIHKLPVQINPYFIT 1128
W E ++ G +P +K+ N+ YI+IAA LP K VRDVA F+AK A++ + K M+ DH ++ M P P++ P P D+ +A++ +LQ+N+ ++N++R N++ G+ DN ML F N + L + I LPVQ++ I+
Sbjct: 31 WSPHEMQIFHRGFAEFPADKYDNVTRYIKIAAMLPGKCVRDVA---------FKAK------ALSVSQEK-----------MSMNRDH-----FSKR-------MKIEPYQETPTLA---FPIPMGGDDPEDAQLNALLQDNMVMMNTMRSNLLSGKLDDNKEPMLKFRDNCHTVLNTLGDI-CNSIPPLPVQLDTSLIS 188 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2893.7888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2893.7888.1 >prot_H-paniculata_contig2893.7888.1 ID=prot_H-paniculata_contig2893.7888.1|Name=mRNA_H-paniculata_contig2893.7888.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=460bp MSAKAKPGAKEVPKALGPDRVPENQKREVYERVRRAMDAKGSVCTQHKVGback to top mRNA from alignment at H-paniculata_contig2893:7051..16848- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2893.7888.1 ID=mRNA_H-paniculata_contig2893.7888.1|Name=mRNA_H-paniculata_contig2893.7888.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9798bp|location=Sequence derived from alignment at H-paniculata_contig2893:7051..16848- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2893:7051..16848- >mRNA_H-paniculata_contig2893.7888.1 ID=mRNA_H-paniculata_contig2893.7888.1|Name=mRNA_H-paniculata_contig2893.7888.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2760bp|location=Sequence derived from alignment at H-paniculata_contig2893:7051..16848- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |