mRNA_H-paniculata_contig2890.7884.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 167 bits (424), Expect = 4.700e-43 Identity = 106/289 (36.68%), Postives = 162/289 (56.06%), Query Frame = 2
Query: 218 VIPKTVISSRLRLVYYVGVEGTGHHYFADVFNSMFKAHSEL--QYVNSCDIGKMTYFPLMLG-DVNGYNHSMEALRKELRVLADSEENLPEFGTIITVQRTHPLQLTTCRNVHQLSFPNKYGPNKVQAHPDLRALTEISEEEGVDLRYLYLQRSAWDLIVSNTNHRQFHTFLQGRHVIDDRPV--ERMFLEYLHITLTNIAVLGSMLEEMGSEFIVCHKFDSMGDPIQAKAVAQFLAPSDKVARYLESAILESGESPGGEREELLFEDAAVFVERLQKKLDTFEARICN 1069
++PKT +S RLV+ G+EGTGHHY S+F + L +Y + +I + Y PL +G +V + S + +R LA+ NL G + C S+P GP KV + DL + E +E G+D R LYL+RSA +++++NT HR+FH + D+ V ER+FL+Y+ + T+IAVL S L E+G EF+VCH +D +GD QA +A F++P+D++A +ES+++++ + + L FEDA V RLQ+KLD FE C
Sbjct: 138 ILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNMNLPRRYGHGKEIYEY-YAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFS-------IPC------SYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLLMGD----DEETVGQERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEIASLVESSLVQTAKK-SSRTDPLPFEDAYAVVLRLQRKLDAFEHLYCG 407
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 136 bits (343), Expect = 1.110e-31 Identity = 87/254 (34.25%), Postives = 132/254 (51.97%), Query Frame = 2
Query: 212 PGVIPKTVISSRLRLVYYVGVEGTGHHYFADVFNSMFKAHSELQYVNSCDIGKMTYFPLMLGDVN-GYNHSMEALRKELRVLADSEENLPEF-GTIITVQRTHPLQLTTCRNVH-QLSFPNKYGPNKVQAHPDLRALTEISEEEGVDLRYLYLQRSAWDLIVSNTNHRQFH-TFLQGRHVIDDRPVERMFLEYLHITLTNIAVLGSMLEEMGSEFIVCHKFDSMGDPIQAKAVAQFLAPSDKVARYLESAILES 961
P V+ K +SS+LR+++ VG+EGTGHHYF +VF+ + + N+C I K Y L Y + LR+EL ENL + +T + Q TCR+ +SFPN G +K + D R L E +E GVD+R++YL RSA ++VS+T H + TF++ + + N AV+ S +E+G F C +++SM DP Q VA+F+AP + A+ LE +LE+
Sbjct: 55 PAVVEKKTVSSQLRVMFLVGLEGTGHHYFLNVFDDACTT-AAVPCANACPIAKALYPSLATPSTKQDYERARRELRREL-------ENLAAYPAEFMTEGQAAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGGTFMRESRAL----------------INNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTAQRLEGKMLEN 284
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 128 bits (322), Expect = 4.080e-29 Identity = 85/252 (33.73%), Postives = 127/252 (50.40%), Query Frame = 2
Query: 212 PGVIPKTVISSRLRLVYYVGVEGTGHHYFADVFNSMFKAHSELQYVNSCDIGKMTYFPLMLGDV-NGYNHSMEALRKELRVLAD-SEENLPEFGTIITVQRTHPLQLTTCR--NVHQLSFPNKYGPNKVQAHPDLRALTEISEEEGVDLRYLYLQRSAWDLIVSNTNHRQFHTFLQGRHVIDDRPVERMFLEYLHITLTNIAVLGSMLEEMGSEFIVCHKFDSMGDPIQAKAVAQFLAPSDKVARYLESAIL 955
P V+ K +SSR+R+V+ VG+EGTGHHY ADV + K +++ C + K+ Y L L N Y + + LR+E+ LA EE+L E + + + CR +S+PN G K + D R + E +E GVD+R++YL RSA D++ S++ H + F+ I L N+AV+ S +E+ F C ++ M DP QA VA FLAP++ A L IL
Sbjct: 96 PVVVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKK-DKVRCPKLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTV-------VSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNYGG---------------SFIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPNNHTAEKLADQIL 324
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Match: D7FZI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI1_ECTSI) HSP 1 Score: 102 bits (255), Expect = 1.440e-22 Identity = 49/104 (47.12%), Postives = 68/104 (65.38%), Query Frame = 2
Query: 758 ERMFLEYLHITLTNIAVLGSMLEEMGSEFIVCHKFDSMGDPIQAKAVAQFLAPSDKVARYLESAILESGESPGGEREELLFEDAAVFVERLQKKLDTFEARICN 1069
ER+FLEY+ + T+IAVL S L E+G EFIVCH +D +GD QA +A F+AP+D++A +ES+++++ L FEDA V RLQ+KLD FE C
Sbjct: 11 ERLFLEYMRVLFTDIAVLQSFLSEIGPEFIVCHDWDRLGDKEQASTIAHFIAPNDEIAGLVESSLVQTARKKSSNTNPLPFEDADAVVSRLQRKLDAFEPLYCG 114
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 2.310e-19 Identity = 79/258 (30.62%), Postives = 120/258 (46.51%), Query Frame = 2
Query: 356 CDIGKMTYFPLMLGDV-NGYNHSMEALRKELRVLAD-SEENLPEFGTIITVQRTHPLQLTTCR--NVHQLSFPNKYGPNKVQAHPDLRALTEISEEEGVDLRYLYLQRSAWDLIVSNTNHRQFHTFLQGRHVIDDRPVERMFLEYLHITLTNIAVLGSMLEEMGSEFIVCHKFDSMGDPIQAKAVAQFLAPSDKVARYLESAIL---------ESGESP----GGER---EELLFEDAAVFVERLQKKLDTFEARICN 1069
C + K+ Y L L + N Y + + LR+E+ LA EE+L E + + + CR +S+PN G K + D R + E +E GVD+R++YL RSA D++ S++ H + F+ I L N+AV+ S +E+ F C ++ M DP QA VA FLAP+++ A L +L ESG GG+R E + A V RLQ++LD E +C+
Sbjct: 20 CVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTV-------VSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNYGG---------------SFIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLSHVKIKSPPESGNKQSWGEGGKRLRHPEDVDPPKAAVVTRLQQRLDMVEKDVCS 255
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 4.210e-12 Identity = 51/138 (36.96%), Postives = 71/138 (51.45%), Query Frame = 2
Query: 317 MFKAHSELQYVNSC--DIGKMTYFPLMLGDVNGYNHSMEALRKELRVLADSEENLPEFGTIITVQRTHPLQLTTCRNVHQLSFPNKYGPNKVQAHPDLRALTEISEEEGVDLRYLYLQRSAWDLIVSNTNHRQFHTFL 724
MFKAH +L + + K M + S + R ++R LA + LP GT+ QL T +S+P GP KVQ + DLR L E +E EGVDLR LY++RSA +L++++T HR F FL
Sbjct: 1 MFKAHPDLVRFDEKLPNFWKFFISTTMRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTV---------QLIT----GGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGFQNFL 125
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Match: A0A1Q9CH20_SYMMI (Uncharacterized protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CH20_SYMMI) HSP 1 Score: 72.0 bits (175), Expect = 6.440e-10 Identity = 73/293 (24.91%), Postives = 127/293 (43.34%), Query Frame = 2
Query: 221 IPKTVISSRLRLVYYVGVEGTGHHYFADVFNSMFKAHSELQYVNSCDIGKMTYFPLM-LGDVNGYNHSME---ALRKELRVLADSEENLPEFGTIITVQRTHPLQLTTCRNVHQLSFPNKYGPNKVQAHPDLRALTEISEEEGVDLRYLYLQRSAWDLIVSNTNHRQFHTFLQGRHVIDDRPVERMFLEYLHITLTNIAVLGSMLEEMGSEFIVCHKFDSMGDPIQAKAVAQFLA-------PSDKVARYLESAILESGESPGGEREELLFEDAAVFVERLQKKLDTFEARIC 1066
+ K V+SS++R V++ GVE TGHH ++D+ + + H ++ D P G V G + S++ + + +++++ NL V PL L T + +S+PN GP++V +PDL AL +++E GVDLR + L R +I S +F + IT+T +A+L + L + E + C +D DP + + L+ D R +E S P + E+ + A +E ++ +A IC
Sbjct: 50 VTKKVVSSKVRFVFFAGVENTGHHVWSDMLSRL-PVHFSQSLQDALDSKDGRIKPQGGHGGVFGSSSSVDREDSAKTVVQIMSHMASNLSSTPGCKVV----PLNLVT----NMISYPNGGGPDRVFQNPDLLALAKLAESAGVDLRIVLLVRHPAYMIPSRAR----------------TDASNIFHDIQIITMT-LALLSAQLNLLDPEMVGCWSYD---DPTTITRLPELLSFMGFCGEDLDLGRRSMEEVFKPSNRPPASKAEQEMLAVRAQLLEEFRE----VQAEIC 309
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Match: A0A7S3PR25_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR25_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.110e-8 Identity = 61/232 (26.29%), Postives = 104/232 (44.83%), Query Frame = 2
Query: 209 LPGVIPKTVISSRLRLVYYVGVEGTGHHYFADVFNSMFKAHSELQYVNSCDIGKMTYFPL-----MLGDVNGY--NHSMEALRKELRVLADSEENLPEFGTIITVQRTHPLQLT------TCRNVHQLSFPNKYGPNKVQAHPDLRALTEISEEEGVDLRYLYLQRSAWDLIVSNTNHRQFHTFLQGRHVIDDRPVERMFLEYLHITLTNIAVLGSMLEEMGSEFIVCHKFD 865
+P + KTV S +LRLV++VG+EGTGHH + + + K Q C + + P + G+ + + E+ + + AD+ L TH L L C ++ S+P G K HPD+ L E++E G+D R + LQR A +L++S+ HR F+ + + ++R +E N A + + + M +F C ++D
Sbjct: 408 MPHRLKKTVFS-KLRLVFFVGLEGTGHHLWQGIVMKLLK---NKQLNAECKLNDLIMHPAGGCWAPWNNGKGFFCSAASESFKTGYEMAADAMMKLKASNAT----GTHMLNLVYRGWKGNCGSI--ASYPCFGGSEKNLQHPDVLKLAELAESIGIDFRVVLLQRKAEELVISDIWHRHFN--IGHPKMYEERVLEN-----------NAASIYTTIATMDPKFYSCTQYD 616
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Match: A0A812H6X7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812H6X7_9DINO) HSP 1 Score: 58.9 bits (141), Expect = 8.120e-6 Identity = 47/224 (20.98%), Postives = 101/224 (45.09%), Query Frame = 2
Query: 221 IPKTVISSRLRLVYYVGVEGTGHHYFADVFNSMFKAHSELQYVNSCDIGKMTYFPLMLGDVNGYNHSMEALRKE-----LRVLADSEENLPEF-GTIITVQRTHPLQLTTCRNVHQLSFPNKYGPNKVQAHPDLRALTEISEEEGVDLRYLYLQRSAWDLIVSNTNHRQFHTFLQGRHVIDDRPVERMFLEYLHITLTNIAVLGSMLEEMGSEFIVCHKFDSMG 874
+ K V+SS++R V++ G+EGTGHH++ ++ + +HS S ++ + P + ++ S E +R+ + ++++ ++NL G + + R +S+PN G +++ +PD+ L +++E G+DLR + L R L+ S DR E+ + +++L L+ + ++ C ++ G
Sbjct: 59 VTKKVVSSKIRFVFFAGLEGTGHHFWQEMLRRLSISHSADL---SQELFNRRHGPGL------FSSSDEQVREASAEHVVELMSEMQKNLSSAPGCNVVALNVGGIT----RPSGMMSYPNFGGRDRMFQNPDMFTLAKLAEAAGIDLRIVLLTRQPASLVQSEL----------------DRSYEKDLSHAVRKVSMTLSLLSEQLDLLDPAYVSCWSYEDPG 253
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Match: A0A7S3NN69_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NN69_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 7.750e-5 Identity = 61/245 (24.90%), Postives = 94/245 (38.37%), Query Frame = 2
Query: 221 IPKTVISSRLRLVYYVGVEGTGHHYFADVFNSMFKAHSELQ----YVNSCDIGKMTYFPLMLGDVNGYNHSMEALRKELRVLADSEENLPEFGTIITVQRTHPLQLTTCRNVH---QLSFPN--------KYGPNKVQAHPDLRALTEISEEEGVDLRYLYLQRSAWDLIVSNTNHRQFHTFLQGRHVIDDRPVERMFLEYLHITLTNIAVLGSMLEEMGSEFIVCHKFDSMGDPIQAKAVAQFL 910
I K S R RLV++ G+EGTGHH V + S + + K + D + + K L+ + E+N G + Q T N +LS+P+ KV AH DL ++ E G+DLR + + R+ D+I S HR F + PV+ L LTN+ VL L+ + +F ++ S P +A F+
Sbjct: 26 IEKKSYSERRRLVFFAGLEGTGHHTLCKVLEPRCENDSTSNKLPCFEFDAKLQKGVSRLIRANDDSNKTKYENEIIKSLQRFSKDEKN--REGIVDGPQMRILHFQCTSENTGFGLKLSYPDATIGKAMKSNHEGKVDAHLDLPFFVKLCERAGIDLRIIVVLRNPIDMIRSTAVHRHFGSI----------PVQTRIL------LTNLIVLLEQLKTVDPKFFCTIQYSSFIQPSSVSTIASFI 252 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2890.7884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2890.7884.1 >prot_H-paniculata_contig2890.7884.1 ID=prot_H-paniculata_contig2890.7884.1|Name=mRNA_H-paniculata_contig2890.7884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=331bp MAAFDFCPIFGLLVIAFSSFLTLTCAGDLALASHMRNGSLLPGVIPKTVIback to top mRNA from alignment at H-paniculata_contig2890:1873..4650+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2890.7884.1 ID=mRNA_H-paniculata_contig2890.7884.1|Name=mRNA_H-paniculata_contig2890.7884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2778bp|location=Sequence derived from alignment at H-paniculata_contig2890:1873..4650+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2890:1873..4650+ >mRNA_H-paniculata_contig2890.7884.1 ID=mRNA_H-paniculata_contig2890.7884.1|Name=mRNA_H-paniculata_contig2890.7884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1986bp|location=Sequence derived from alignment at H-paniculata_contig2890:1873..4650+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |