mRNA_H-paniculata_contig28895.7878.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Match: A0A6H5K6Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Z7_9PHAE) HSP 1 Score: 193 bits (490), Expect = 7.800e-56 Identity = 90/110 (81.82%), Postives = 98/110 (89.09%), Query Frame = 1
Query: 46 VVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQAITTPENRYEEYIKSTDFINTIIFPGSCCPSLNALLEAMARNSELSLEGLDNICVHYARTLQEWRHRFNHSLKQV 375
++ C IEAVGHNYLG+FFAS DALLA GGVMVMQAITTPENRYEEYI+STDFINTIIFPGSCCPSL ALL AMA +S SLEGLDN+CVHYA TL++WRHRFNHSL QV
Sbjct: 490 IISCEMIEAVGHNYLGTFFASADALLAPGGVMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLSAMASSSSFSLEGLDNMCVHYAHTLKQWRHRFNHSLDQV 599
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Match: D7G9I1_ECTSI (Cyclopropane-fatty-acyl-phospholipid synthase/ oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I1_ECTSI) HSP 1 Score: 192 bits (489), Expect = 1.710e-54 Identity = 90/110 (81.82%), Postives = 98/110 (89.09%), Query Frame = 1
Query: 46 VVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQAITTPENRYEEYIKSTDFINTIIFPGSCCPSLNALLEAMARNSELSLEGLDNICVHYARTLQEWRHRFNHSLKQV 375
++ C IEAVGHNYLG+FFAS DALLA GGVMVMQAITTPENRYEEYI+STDFINTIIFPGSCCPSL ALL AMA +S SLEGLDN+CVHYA TL++WRHRFNHSL QV
Sbjct: 905 IISCEMIEAVGHNYLGTFFASTDALLAPGGVMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLSAMASSSSFSLEGLDNMCVHYAHTLKQWRHRFNHSLDQV 1014
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Match: A0A7S4DDE0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDE0_HETAK) HSP 1 Score: 173 bits (438), Expect = 1.180e-49 Identity = 79/110 (71.82%), Postives = 95/110 (86.36%), Query Frame = 1
Query: 46 VVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQAITTPENRYEEYIKSTDFINTIIFPGSCCPSLNALLEAMARNSELSLEGLDNICVHYARTLQEWRHRFNHSLKQV 375
++ C IEAVGHNYLGSFFA+ + LL GV VM+AITTPE+RY+EY++STDFINTI FPGSCCPSL ALLEAMARNSE+SLEG DNI +HYA+TL+EWRHRFN +L ++
Sbjct: 275 IISCEMIEAVGHNYLGSFFAAVERLLKPDGVFVMEAITTPESRYQEYLRSTDFINTIAFPGSCCPSLTALLEAMARNSEMSLEGYDNIGLHYAQTLREWRHRFNANLPEI 384
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Match: A0A7S2XUH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUH5_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.770e-44 Identity = 72/110 (65.45%), Postives = 92/110 (83.64%), Query Frame = 1
Query: 46 VVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQAITTPENRYEEYIKSTDFINTIIFPGSCCPSLNALLEAMARNSELSLEGLDNICVHYARTLQEWRHRFNHSLKQV 375
++ C IEAVGHNYLG F+ + ++LL G++VM+AITTPE+RY EY++STDFINTIIFPGSCCPSL ALL+A ++NS L+LEG+DNIC+HYA TL+EWR RFN +L V
Sbjct: 576 IISCEMIEAVGHNYLGQFYRAMESLLKPDGILVMEAITTPESRYVEYLRSTDFINTIIFPGSCCPSLTALLDAASKNSSLTLEGVDNICLHYAETLREWRRRFNKNLTAV 685
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Match: A0A835ZDJ8_9STRA (Mycolic acid cyclopropane synthetase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ8_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.690e-43 Identity = 75/107 (70.09%), Postives = 91/107 (85.05%), Query Frame = 1
Query: 46 VVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQAITTPENRYEEYIKSTDFINTIIFPGSCCPSLNALLEAMARNSELSLEGLDNICVHYARTLQEWRHRFNHSL 366
++ C IEAVGHNYL S+FA+ +ALLA GGV VM+AITTPE+RY+EY++STDFINTIIFPGSCCPSL AL++AMA +S LSLEG +NI VHYA TL+EWR RF +L
Sbjct: 561 IISCEMIEAVGHNYLPSYFAAVEALLAPGGVFVMEAITTPESRYKEYLRSTDFINTIIFPGSCCPSLTALMDAMASHSRLSLEGYENIGVHYAETLREWRCRFTDAL 667
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Match: A0A4D9CY91_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY91_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.180e-41 Identity = 73/110 (66.36%), Postives = 88/110 (80.00%), Query Frame = 1
Query: 46 VVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQAITTPENRYEEYIKSTDFINTIIFPGSCCPSLNALLEAMARNSELSLEGLDNICVHYARTLQEWRHRFNHSLKQV 375
++ C IEAVGH++LG +F + +LL GV VM+AITTPE+RY +Y+KSTDFINTI+FPGSCCPSL +LLEAMAR+S LSLEGL NI VHYA TL+EWR RFN L V
Sbjct: 813 IISCEMIEAVGHSHLGEYFHAVGSLLKPSGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTSLLEAMARHSALSLEGLINIDVHYAETLREWRRRFNRGLHAV 922
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Match: A0A7S2PQB7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQB7_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.060e-39 Identity = 67/106 (63.21%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 46 VVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQAITTPENRYEEYIKSTDFINTIIFPGSCCPSLNALLEAMARNSELSLEGLDNICVHYARTLQEWRHRFNHS 363
V+ C IEAVGH +LG FF + + +LA G++VM+AITTPE RYE Y +STDFINTIIFPGSCCPSL+AL++A + S L+LE +DNI +HYA+TL EWR RFN S
Sbjct: 152 VLSCEMIEAVGHEHLGEFFWAVEQVLAYDGILVMEAITTPETRYETYRRSTDFINTIIFPGSCCPSLHALVDASYKQSSLTLEHIDNIGLHYAQTLAEWRRRFNAS 257
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Match: A0A7S2REM9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REM9_9STRA) HSP 1 Score: 149 bits (376), Expect = 3.100e-39 Identity = 70/110 (63.64%), Postives = 83/110 (75.45%), Query Frame = 1
Query: 46 VVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQAITTPENRYEEYIKSTDFINTIIFPGSCCPSLNALLEAMARNSELSLEGLDNICVHYARTLQEWRHRFNHSLKQV 375
++ C IEAVGHNYLG+FF++ D LL GG+ VM+AITTPE RY+E + DFINT+IFPGSCCPSL ALL AMA S SLE LDNI +HYA TL+EWR RFN +V
Sbjct: 795 IISCEMIEAVGHNYLGAFFSAVDRLLKPGGIFVMEAITTPECRYDEVRTAADFINTVIFPGSCCPSLQALLTAMAAKSNFSLERLDNINLHYAETLREWRRRFNQQRARV 904
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Match: A0A7S4SWZ7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SWZ7_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.150e-38 Identity = 67/110 (60.91%), Postives = 85/110 (77.27%), Query Frame = 1
Query: 46 VVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQAITTPENRYEEYIKSTDFINTIIFPGSCCPSLNALLEAMARNSELSLEGLDNICVHYARTLQEWRHRFNHSLKQV 375
V+ C IEAVGH +LG FF + + +LA G++VM+AITTPE RYE Y++STDFINTIIFPG CCPSL+AL++A + S L+LE +DNI +HYARTL EWR RFN + V
Sbjct: 277 VLSCEMIEAVGHEHLGEFFWAVEQVLAPDGILVMEAITTPEARYETYLRSTDFINTIIFPGGCCPSLHALIDASYKQSTLTLEHIDNIGLHYARTLAEWRRRFNSNESTV 386
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Match: A0A7S2DZ31_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DZ31_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.090e-38 Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 7 LSSNRDFNRLLCFVVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQAITTPENRYEEYIKSTDFINTIIFPGSCCPSLNALLEAMARNSELSLEGLDNICVHYARTLQEWRHRFNHSLKQV 375
L++ R F+R +V C IEAVGHNY GS+F + D LLA+ GV VMQAIT PE RYEE + DFINTIIFPGS CPS++ALL AMA+ S+LSLE LD + +HYA TL+EWR RF+ L V
Sbjct: 230 LANPRAFDR----IVSCEMIEAVGHNYYGSYFEAVDMLLAKDGVFVMQAITIPEARYEEVRHAADFINTIIFPGSNCPSVHALLAAMAKKSKLSLEKLDQLNLHYAETLREWRRRFHLRLDDV 348 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28895.7878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig28895.7878.1 >prot_H-paniculata_contig28895.7878.1 ID=prot_H-paniculata_contig28895.7878.1|Name=mRNA_H-paniculata_contig28895.7878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp KCLSSNRDFNRLLCFVVICRQIEAVGHNYLGSFFASCDALLAQGGVMVMQback to top mRNA from alignment at H-paniculata_contig28895:442..1641+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig28895.7878.1 ID=mRNA_H-paniculata_contig28895.7878.1|Name=mRNA_H-paniculata_contig28895.7878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1200bp|location=Sequence derived from alignment at H-paniculata_contig28895:442..1641+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig28895:442..1641+ >mRNA_H-paniculata_contig28895.7878.1 ID=mRNA_H-paniculata_contig28895.7878.1|Name=mRNA_H-paniculata_contig28895.7878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at H-paniculata_contig28895:442..1641+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |