prot_H-paniculata_contig2889.7875.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2889.7875.1
Unique Nameprot_H-paniculata_contig2889.7875.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length602
Homology
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Match: D8LJR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR3_ECTSI)

HSP 1 Score: 339 bits (869), Expect = 2.460e-104
Identity = 170/323 (52.63%), Postives = 224/323 (69.35%), Query Frame = 0
Query:  273 RTLNMGKKWDKAQALAEAKRKPLKANRPARVRPQQRSFLLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHRGIYCCPSPTFDGMYDLPKHSLKMLAALKAAHGEQLKQLNIQDPEVLARHEGATTLLDLVDRGVDNEEAAGTLHLDVVRELKASTEAKVLLAVDSYNEFFQPSMWHYMDDKLETPHFTATNPLVPPVKITQNGYTFPTEESEG-GDGEVPSPPHAT--DKNGLRFYSTEEAGKCLPTPPVNGMVVCANSGRYPPVTKFMR-KKWNPFEEAAGRMVHGVSVLVEPWTKDDMMPLLEHFVEDKVVRGE 591
            + L  G  W++ +ALAE+KRKPLK  R   ++P QRS+LLTG RG GKSC+L+  VLHARSTGWIV+FVPD  +L+ +GIYC PSP  +G+YDLP  S+K L  L+ AHG+QLK ++I+DPEVL RHEGA TLLD++D G+ ++E AGT H DV+REL A+TEAKV+LA+D YNE FQ S WHY D+KLE PH TAT PL+PP+  T  G  F  +      + EV +    T  +  G+ + S E    CLP PP NG+VVCA SGRYPP+ +  + KKW PFE  AGR+   VS+ VEP+T+ + + +L+H+   + V  E
Sbjct:  320 KVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQRSYLLTGRRGSGKSCVLDHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLPVQSMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHYGDNKLEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAERKRTPAEAGGVAWMSPETGAACLPPPPANGIVVCAVSGRYPPLKRLRKNKKWVPFEATAGRLAQAVSIPVEPYTRREFLRVLKHYARVEEVVNE 642          
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Match: A0A6H5KXH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH7_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 4.770e-55
Identity = 128/308 (41.56%), Postives = 168/308 (54.55%), Query Frame = 0
Query:  273 RTLNMGKKWDKAQALAEAKRKPLKANRPARVRPQQRSFLLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHRGIYCCPSPTFDGMYDLPK--HSLKMLAALKAAHGEQLKQLNIQDPEVLARHEGATTLLDLVDRGVDNEEAAGTLHLDVVRELKASTEAKVLLAVDSYNEFFQPSMWHYMDDK-------LETPHFTATNPLVPPVKITQNGYTFPTEESEG-GDGEVPSPPHAT--DKNGLRFYSTEEAGKCLPTPPVNGMVVCANSGRYPPVTKFMR-KKWNPFEEAAGRMVHGVSVLV 567
            + L  G  W++ +ALAE+KRKPLK  R   ++P Q         G G        ++ + +                      P+P    +   P    S+K L  L+ AHG+QLK ++I+DPEVL RHEGA TLLD++D G+ ++E AGT H DV+REL A+TEAKV+LA+D YNE FQ S W+Y D K       LE PH TAT PL+PP+  T  G  F  +      + EV +    T  +  G  + S E    CLP PP NG+VVCA SGRYPPV +  + KKW PFE  AGR+   VSV V
Sbjct:  316 KVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQ---------GGGAPARAASSIMPSST----------------------PAPAHPTLRSPPPVLQSMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSHWYYGDSKASAAVSRLEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAETKRTPAEAGGGAWMSPETGAACLPPPPANGIVVCAVSGRYPPVKRLRKNKKWVPFEATAGRLAQAVSVRV 592          
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Match: A0A7S3ZXU8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXU8_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.420e-22
Identity = 63/157 (40.13%), Postives = 88/157 (56.05%), Query Frame = 0
Query:  305 PQQRSFLLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHRGIYCCPSPTFDGMYDLPKHSLKMLAALKAAHGEQLKQLNIQDPEVLARHEGATTLLDLVDRGVDNE---EAAGTLHLDVVRELKASTEAKVLLAVDSYNEFFQPSMWHYMD 458
            P + ++LLTGARG GKS  L QIV  AR+ GW+ +FV  A D+ H G Y  PSP   G ++ P  S ++L A + AHG  L  +   D    A   G  TL ++V   +D++   + A T   DVV  L+A   A VL+AVD Y+  F+P+  +Y D
Sbjct:  146 PPRDAYLLTGARGAGKSVALAQIVTQARARGWLCLFVARARDVGHHGDYVVPSPHHAGRFEEPSRSREVLEAFREAHGNDLATVKCTD--AAAERWGGATLREVVGAALDDKKRGDEASTALADVVDGLRAHDAAPVLIAVDEYSALFEPATAYYYD 300          
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Match: A0A7S2WS36_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS36_9STRA)

HSP 1 Score: 100 bits (250), Expect = 2.800e-19
Identity = 60/183 (32.79%), Postives = 97/183 (53.01%), Query Frame = 0
Query:  311 LLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHRGIYCCPSPTFDGMYDLPKHSLKMLAALKAAHGEQLKQLNIQDPEVLARHEGATTLLDLVDRGVDNEEAAGTLHLDVVRELKASTEAKVLLAVDSYNEFFQPSMWHYMDDKLETPHFTATNPLVPPVKITQNGYTFPTEESEGG 493
            L +  RGVGKS  L   V  AR  GW+V+FV D+ + +  G +  PSP  +GM+D P+ +  +L    A HGE +  L +Q  E  A    ATTL +L+  G+ +++AA     D+  EL A T+   LLA+D+ +  ++ + +H+   KL+    T  + L     ++++G   P  E + G
Sbjct:  129 LTSDFRGVGKSLSLAHAVHWARDQGWVVLFVTDSLEFVQGGHWVQPSPYVEGMFDQPQVAHAVLEEFHAIHGEAVASLPVQTDEAKAHFSSATTLGELMQAGLADQDAASQAVADLRLELGAQTDLPFLLAIDNVDLLYRNTEYHHDMRKLDPAEMTLLHGL---RDLSKDGELIPGREIQNG 308          
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Match: W7TU02_9STRA (Mitochondrial 28s ribosomal s29-like protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU02_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 8.920e-18
Identity = 60/155 (38.71%), Postives = 80/155 (51.61%), Query Frame = 0
Query:  310 FLLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHRGIYCCPSPTFDGMYDLPKHSLKMLAALKAAHGEQLKQLNIQDPEVLARHE--GATTLLDLVDRGVDNEEAAGTLHLDVVRELKASTEAKVLLAVDSYNEFFQPSMWHYMDDKLE 462
            FLL+G RG GK+  L   V +AR +GW+V FVP A++ LH G    PSP + G +D P  +   L  L  AHG Q   L    P  L   E  G  T  DL+  G+   + A T  L++ R L+      VL AVD  +E+F PS + Y   K+E
Sbjct:  421 FLLSGPRGSGKTATLYHAVHYARRSGWVVFFVPSAFEYLHEGGLIRPSPFYRGYFDTPDLAQTTLRQLGEAHGHQFASLPYTAPRGLESLELSGEYTCWDLMALGLSQRKWATTCLLELKRALENQDAYPVLFAVDEVSEWFYPSSYFYARKKIE 575          
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Match: A0A0N7L5J3_PLAHL (Atp-dependent dna helicase snf21 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5J3_PLAHL)

HSP 1 Score: 97.8 bits (242), Expect = 2.430e-17
Identity = 56/164 (34.15%), Postives = 90/164 (54.88%), Query Frame = 0
Query:  309 SFLLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHRGIYCCPSPTFDGMYDLPKHSLKMLAALKAAHGEQLKQLNIQD---------------PEVLARH-EGATTLLDLVDRGVDNEEAAGTLHLDVVRELKASTEAKVLLAVDSYNEFFQPSMWHY 456
            ++L+ G RG GKS  L+QIV  AR + W+V++VP+     H   Y   SP  +G +D+  + + +L      HGEQ+K + ++                P+V++ + E A TL D+V  G+ +EE A     D+  EL  +TE  VL+A+D YN +FQP+++ Y
Sbjct:  129 AYLIDGIRGTGKSFALHQIVQFARESNWVVLYVPNPRSWTHEAPYVVLSPYQEGKFDIDVYGVDLLQKFLHCHGEQIKSIPLRGKYTDRYYPTNKFESKPKVVSDYAEAALTLHDVVVCGIRDEELACQAVCDLKAELAQTTEFPVLIAIDDYNTWFQPTVFGY 292          
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Match: A0A0W8DF35_PHYNI (COP9 signalosome complex subunit 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DF35_PHYNI)

HSP 1 Score: 95.5 bits (236), Expect = 4.510e-17
Identity = 55/164 (33.54%), Postives = 89/164 (54.27%), Query Frame = 0
Query:  309 SFLLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHRGIYCCPSPTFDGMYDLPKHSLKMLAALKAAHGEQLKQLNIQD---------------PEVLARH-EGATTLLDLVDRGVDNEEAAGTLHLDVVRELKASTEAKVLLAVDSYNEFFQPSMWHY 456
            ++L+ G RG GKS  L+QIV +AR + W+V+++P+     +   Y   SP  +G +D+  + + +L      HGEQLK + ++                P+  A + + A TL D+V  GV +EE A     D+  EL  +TE  VL+A+D YN +FQP+++ Y
Sbjct:  229 AYLIDGERGTGKSFALHQIVQYARESNWVVLYIPNPRSWTNEAPYVMQSPYQEGKFDIDVYGVDLLQKFLHCHGEQLKSIPLRGKYADRYYPTDKYESKPKNAADYKDAALTLRDVVVGGVRDEELACQAVCDLKEELAQTTEFPVLIAIDDYNTWFQPTVFGY 392          
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Match: A0A8K0UVS7_9AGAM (Mitochondrial ribosomal death-associated protein 3-domain-containing protein n=1 Tax=Cristinia sonorae TaxID=1940300 RepID=A0A8K0UVS7_9AGAM)

HSP 1 Score: 72.0 bits (175), Expect = 1.220e-9
Identity = 48/151 (31.79%), Postives = 79/151 (52.32%), Query Frame = 0
Query:  310 FLLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHRG---IYCCPSPTFDGMYDLPKHSLKMLAALKAAHGEQLKQLNIQ-----DPEVLARHEGATTLLDLVDRGVDNEEAAGTLHLDVVRELKASTEAKVLLAVDSYNEFFQPS 452
             + TG+ G GKS ++ Q + +A+S G++V++VP A  L+      +Y   + T    Y  PK+S  +L+ +   +   L+QL +      D   +  H+G+  L+DL+D GV +   A  +   V  EL   T+  VLLAVD +  FF P+
Sbjct:  171 LVFTGSAGNGKSYLMLQAIAYAKSIGYLVVYVPRASRLVDSSTAYVYDARTQT----YAQPKYSSSLLSRILTVNDSSLQQLKLHKDFLADDGSVRLHKGSP-LVDLIDLGVRDASVAHVVLSAVFEELAKQTQFPVLLAVDDFQSFFNPT 316          
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Match: A0A1D1XKY6_9ARAE (28S ribosomal protein S29, mitochondrial (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XKY6_9ARAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.840e-9
Identity = 50/159 (31.45%), Postives = 76/159 (47.80%), Query Frame = 0
Query:  307 QRSFLLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHRGIYCCPSPTFDGMYDLPKHSLKMLAALKAAHGEQLKQLNIQDPEVLARHEGA----------------TTLLDLVDRGVDNEEAAGTLHLDVVRELKASTEAKVLLAVDSYNEFF 449
            Q+  +L G    GKS  L  +V  ARS  W+V +VP+  +  H G +   S T  G++D P H+ K L      +   L++L IQ  + +   EGA                +TLLDLV  G++ + AA  + + +  EL    +  VL A+D YN +F
Sbjct:  230 QKQIVLDGPVSCGKSIALAMLVYWARSEDWLVFYVPNGREWTHGGFFYKNSQT--GLWDTPVHATKTLQDFLKFNEPHLQKLPIQVFDPIPLGEGAGIRMRKDADSMAMPEDSTLLDLVQTGIEVQHAAVGVLVRLRTELSMVKDVPVLFAIDQYNSWF 386          
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Match: A0A1Z5JXK7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXK7_FISSO)

HSP 1 Score: 65.9 bits (159), Expect = 1.420e-7
Identity = 49/166 (29.52%), Postives = 77/166 (46.39%), Query Frame = 0
Query:  309 SFLLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHRGIYCCPSPTFDGMYDLPKHSLKMLAALKAAHGEQLKQLNIQDPEVLARHEGATTLLDLVDRGVDNEEAAGTLHLDVVRE--------LKAST--------EAKVLLAVDSYNEFFQPSMWHYMD 458
            S L++G +GVGK+  +  IV  ARS+G++V+++P+   L   G Y  P+P   G++D+P  S +        H   +  LN+    V+A H     L  L     D+ + A    LD  R         L A+         E   LLA+D +N F+ PS + + D
Sbjct:  292 SILVSGCQGVGKTAAVAAIVASARSSGYLVLYLPNGDQLHQNGFYVEPNPQKKGIFDIPIMSQRACDDFLKTHKSDMIGLNVPKG-VIAEHLAKDQLQRLFRDAKDDSQIALNALLDFGRGRINFAAPCLSAAMDYLMYHQDEKPFLLAMDEFNCFYMPSHYFHAD 456          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2889.7875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LJR3_ECTSI2.460e-10452.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXH7_9PHAE4.770e-5541.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3ZXU8_9STRA1.420e-2240.13Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S2WS36_9STRA2.800e-1932.79Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TU02_9STRA8.920e-1838.71Mitochondrial 28s ribosomal s29-like protein n=4 T... [more]
A0A0N7L5J3_PLAHL2.430e-1734.15Atp-dependent dna helicase snf21 n=1 Tax=Plasmopar... [more]
A0A0W8DF35_PHYNI4.510e-1733.54COP9 signalosome complex subunit 1 n=1 Tax=Phytoph... [more]
A0A8K0UVS7_9AGAM1.220e-931.79Mitochondrial ribosomal death-associated protein 3... [more]
A0A1D1XKY6_9ARAE1.840e-931.4528S ribosomal protein S29, mitochondrial (Fragment... [more]
A0A1Z5JXK7_FISSO1.420e-729.52Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019368Ribosomal protein S23/S29, mitochondrialPFAMPF10236DAP3coord: 307..474
e-value: 2.0E-25
score: 89.6
IPR019368Ribosomal protein S23/S29, mitochondrialPANTHERPTHR12810MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29coord: 119..472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2889contigH-paniculata_contig2889:5265..10601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2889.7875.1mRNA_H-paniculata_contig2889.7875.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2889 5201..10741 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2889.7875.1 ID=prot_H-paniculata_contig2889.7875.1|Name=mRNA_H-paniculata_contig2889.7875.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=602bp
MMARVGLLRARGGGHTFTGNHHQSLFYRSGTSAARSVASGRAASARSSQA
LVSSFSSRSADNRGVVHDRGSFVLGVVGSSYVRVSIAAQRESAARAAAVG
VGGGGLGDKRWLSSQPAVSEQRHQDGQEEFVDLRMNDRGSLFPEGLAGGR
QGEVASYLRRGVGHKLKAPPGSNIKHRDEIPSPLLLMRRESSRAVMEALD
AYASGEEWGEAPATRPRRENVDGESDTASDTSGSAEVGNPQEQLPNLNSK
SKIYESEEERLGEVVPRRARRWRTLNMGKKWDKAQALAEAKRKPLKANRP
ARVRPQQRSFLLTGARGVGKSCMLNQIVLHARSTGWIVIFVPDAWDLLHR
GIYCCPSPTFDGMYDLPKHSLKMLAALKAAHGEQLKQLNIQDPEVLARHE
GATTLLDLVDRGVDNEEAAGTLHLDVVRELKASTEAKVLLAVDSYNEFFQ
PSMWHYMDDKLETPHFTATNPLVPPVKITQNGYTFPTEESEGGDGEVPSP
PHATDKNGLRFYSTEEAGKCLPTPPVNGMVVCANSGRYPPVTKFMRKKWN
PFEEAAGRMVHGVSVLVEPWTKDDMMPLLEHFVEDKVVRGEAKQRVLVVR
T*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019368Ribosomal_S23/S29_mit