prot_H-paniculata_contig2889.7874.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2889.7874.1
Unique Nameprot_H-paniculata_contig2889.7874.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Match: D8LJR2_ECTSI (Coatomer protein complex, gamma sub-unit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR2_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 2.870e-142
Identity = 203/219 (92.69%), Postives = 214/219 (97.72%), Query Frame = 0
Query:    1 MSIAPISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEGGDPPPCFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSLRLPASLKTKTAPSSSVQKPVSGGNQKSGTQRNEIFVDILERLNVLFSQSGQVVNSSIDGCIQMKSYLSG 219
            MSIAP+SQFFILSPRGDTIISKDYRG+ VAGTTDTFFRKVKFWE GDPPPCF IDGVNY+YVRKNGLLFAVS+QWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKS+RLP++LKTKTAPSSS+QKPVSG  QK+G+QRNEIFVDILERL+VLFSQSGQVVNSSIDGCIQMKSYLSG
Sbjct:    1 MSIAPVSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKVKFWESGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSMRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSG 219          
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Match: A0A835YW81_9STRA (Coatomer protein complex, gamma sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW81_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.140e-109
Identity = 163/219 (74.43%), Postives = 187/219 (85.39%), Query Frame = 0
Query:    1 MSIAPISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEGGDPPPCFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSLRLPASLKTKTAPSSSVQKPVSGGNQKSGTQRNEIFVDILERLNVLFSQSGQVVNSSIDGCIQMKSYLSG 219
            MSIAPIS FFILSPRGDTIISKDYRG+VV G TD FFRKVKF EGGDPPPC NIDGVNY++VRKNGLLF V+++WN SPS  +ELL+RLAKVFKDYCG L+EEAIRKNFIL+YELLDE LDYGYPQ T TE+L+++V NEPI V+  KSLR+P++L  KT PSS+  KP++G       QRNEIFVDILERLNVLF  +GQ++NSSIDGCIQMKSYLSG
Sbjct:    1 MSIAPISHFFILSPRGDTIISKDYRGDVVPGGTDIFFRKVKFTEGGDPPPCMNIDGVNYLFVRKNGLLFGVTTRWNCSPSQVIELLHRLAKVFKDYCGTLTEEAIRKNFILIYELLDEMLDYGYPQTTGTESLKSYVYNEPIAVEPSKSLRIPSTLGAKTNPSSAAHKPITGSTG-GAKQRNEIFVDILERLNVLFGANGQILNSSIDGCIQMKSYLSG 218          
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Match: A0A7S2S1C5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1C5_9STRA)

HSP 1 Score: 305 bits (781), Expect = 1.880e-100
Identity = 147/217 (67.74%), Postives = 185/217 (85.25%), Query Frame = 0
Query:    3 IAPISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEGGDPPPCFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSLRLPASLKTKTAPSSSVQKPVSGGNQKSGTQRNEIFVDILERLNVLFSQSGQVVNSSIDGCIQMKSYLSG 219
            +A +S FFILSPRGDTII KD+RG+   GT + FFRKVKFWE GD PP F+IDGV++V++RKNGLLF  +S++N+SPS+ +ELL+RLAKVFKDYCGVLSEEAIRKNFILVYELLDE +DYGYPQGTSTE+L++ + NEPI+V++ ++ R+P  + +KT PS S QKP++   ++ G Q+NEIFVDILERLNVLFS SG ++NS+IDGCIQMKSYLSG
Sbjct:    1 MASLSLFFILSPRGDTIILKDFRGDCPPGTAEAFFRKVKFWEHGDAPPVFSIDGVHFVFIRKNGLLFVGTSRFNLSPSISIELLHRLAKVFKDYCGVLSEEAIRKNFILVYELLDEMIDYGYPQGTSTESLKSFIHNEPIVVEATRATRMPT-ISSKTTPSVSAQKPITYQRERQGKQKNEIFVDILERLNVLFSPSGTILNSTIDGCIQMKSYLSG 216          
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Match: A0A4D9D754_9STRA (MHD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D754_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.180e-96
Identity = 146/215 (67.91%), Postives = 181/215 (84.19%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEGGDPPPCFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKS-LRLPASLKTKTAPSSSVQKPVSGGNQKSGTQRNEIFVDILERLNVLFSQSGQVVNSSIDGCIQMKSYLSG 219
            +S FFILSPRGDTIIS+D+RG+ +    +  FRKVKFW+ GD PP F++DG+N+VYVRKNGLLF  ++++NVSPS  +ELLNR+AKVFKDYCGVLSEE+IRKNFILVYELLDE +D+GY Q TSTE+L+NHV NEPI+V+S KS LR+P  + +KT PS++V KP++   Q  G Q+NEIFVDILERLNVLFS SG ++NS+IDGCIQMKSYLSG
Sbjct:    5 MSSFFILSPRGDTIISRDFRGDSLPNAAELLFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPK-INSKTTPSTAVHKPITISAQSGGKQKNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSG 218          
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Match: A0A7S2SFF0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SFF0_9STRA)

HSP 1 Score: 285 bits (729), Expect = 7.900e-92
Identity = 141/221 (63.80%), Postives = 182/221 (82.35%), Query Frame = 0
Query:    3 IAPISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEGG-DPPPCFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVK---SLRLPASLKTKTAPSSSVQKPVSGGNQKSGTQRNEIFVDILERLNVLFSQSGQVVNSSIDGCIQMKSYLSG 219
            ++ ISQF+ILSPRGDTIIS+DYR NV  G ++ FFR VKFW+GG + PPCFNIDG+N+V+++++GL F  ++++NVSP+ FLELL RLAK+FKDYCGVLSEEAIRKNFIL+YELLDE +DYGYPQ TSTE L+ HV NEP++VDS+K   + ++P S+  KT PSSSV KPV+    ++G QRNEIFVDILER+ +LF+ +G +++S IDG IQMKSYL G
Sbjct:    1 MSSISQFYILSPRGDTIISRDYRSNVAKGASEIFFRNVKFWQGGGEAPPCFNIDGINFVFIKQSGLYFVCTTKYNVSPNFFLELLQRLAKLFKDYCGVLSEEAIRKNFILIYELLDEIVDYGYPQCTSTEQLKAHVHNEPVVVDSIKQANAFKVP-SINQKTTPSSSVYKPVTMA-ARNGQQRNEIFVDILERVTMLFNNNGYILSSHIDGSIQMKSYLFG 219          
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Match: F0Y376_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y376_AURAN)

HSP 1 Score: 280 bits (716), Expect = 7.210e-90
Identity = 145/223 (65.02%), Postives = 175/223 (78.48%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEG-----GDPPPCFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSLRLPASLKTKTAPSSSVQKPVSGGNQK----SGTQRNEIFVDILERLNVLFSQSGQVVNSSIDGCIQMKSYLSG 219
            +SQFF+LSPRGDTIISKD+RG+   G  + FFRKVKFW       G  PP F +  V YV+V+K+GL+FA +S++N SPSM LELLNR+ KVFKDYCGVLSEEAIRKNFIL+YELLDE +D+GYPQGTSTE L+  V NEP+LVD+ K+ R+P SL  KT PS+SV KP++GG       + + +NEIFVDILERL +LFS SG VVNS+IDGCIQMKSYLSG
Sbjct:    2 LSQFFVLSPRGDTIISKDFRGDSPQGAAEAFFRKVKFWSNDKGASGAAPPVFRVGDVTYVWVKKSGLMFACNSRFNCSPSMTLELLNRVVKVFKDYCGVLSEEAIRKNFILIYELLDEVIDFGYPQGTSTENLKAFVYNEPVLVDAQKT-RVP-SLSAKTTPSTSVHKPIAGGKSSVMGGARSDKNEIFVDILERLTMLFSPSGAVVNSTIDGCIQMKSYLSG 222          
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Match: A0A7S2UX12_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX12_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.730e-87
Identity = 138/223 (61.88%), Postives = 174/223 (78.03%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEGGDPPPCFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDS-------VKSLRLPASLKTKTAPSSSVQKPVSGGNQ-KSGT-QRNEIFVDILERLNVLFSQSGQVVNSSIDGCIQMKSYLSG 219
            +SQFFILSPRG+TIISK YRG+  AG  + FFRKVKFWEGGD PP FN+DG NY+Y+++NG++F  ++ +N SP+  +ELLNR+ K+FKDYCGVLSEEAIRKNF+L+YELLDE +DYG+PQ TSTE L+N++ NEP+LVD         ++LR   +     AP+SS  KPV G  + K+G  QRNEIFVDI+ERLNVLFS SG  +NSSIDG IQMKS+L+G
Sbjct:   24 VSQFFILSPRGETIISKTYRGSFKAGAAEEFFRKVKFWEGGDAPPAFNLDGTNYIYIKRNGIIFLFTTMFNSSPATLIELLNRIIKIFKDYCGVLSEEAIRKNFVLLYELLDEVIDYGHPQCTSTEALKNYIYNEPVLVDQRGIAGQVQRNLRRVTN--PNKAPASSGAKPVQGATKGKAGAKQRNEIFVDIIERLNVLFSPSGYTLNSSIDGRIQMKSFLTG 244          
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Match: A0A7S1C3I7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3I7_9STRA)

HSP 1 Score: 274 bits (700), Expect = 7.700e-87
Identity = 139/219 (63.47%), Postives = 178/219 (81.28%), Query Frame = 0
Query:    3 IAPISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEGGDPPPCFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDS--VKSLRLPASLKTKTAPSSSVQKPVSGGNQKSGTQRNEIFVDILERLNVLFSQSGQVVNSSIDGCIQMKSYLSG 219
            +A I QFFILSPRGDTIISK YRG+VVAGT++ FFRKVKFW+G D PP F IDG+N++++++NGL F  ++++NVSPSM +ELL+R+AKVFKDYCGVLSEE+IRKNFILVYELLDE +DYGY QGT+TETL+ +V NEPI++ S      +LP     KT  +S+V  P+S   ++ G ++NEIFVDILERL VLF+ +G V+NS+IDG IQMKSYL+G
Sbjct:   41 VAMIGQFFILSPRGDTIISKQYRGDVVAGTSEIFFRKVKFWKG-DAPPVFVIDGINFLFIKRNGLYFVATTRFNVSPSMTIELLDRVAKVFKDYCGVLSEESIRKNFILVYELLDELVDYGYAQGTTTETLKAYVYNEPIVLASGGAGGFKLPTGGSGKTKSASAVHAPISLAGRRKG-KKNEIFVDILERLTVLFNSNGYVLNSTIDGSIQMKSYLTG 257          
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Match: A0A2R5G7K4_9STRA (AP-4 complex subunit mu n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7K4_9STRA)

HSP 1 Score: 269 bits (687), Expect = 2.060e-85
Identity = 136/220 (61.82%), Postives = 173/220 (78.64%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEG---GDPPPCFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVK---SLRLPASLKTKTAPSSSVQKPVSGGNQKSGTQRNEIFVDILERLNVLFSQSGQVVNSSIDGCIQMKSYLSG 219
            +SQF+ILSPRGDTIIS+++R +V  GT + FF  VKFW+G    + PPCFNIDGVNY++++++GL F  ++++NVSP+  LELL RLAK+FKDYCGVLSEEAIRKNF+L+YELLDE LDYGYP  +STE L+ HV NEP++VD +K   S ++P  +  KT PSSSV KPV+    KSG QRNEIFVDILERL +LF+ +G  ++S IDG I MKSYLSG
Sbjct:    4 VSQFYILSPRGDTIISRNFRSDVDKGTAEVFFHSVKFWKGDGGNEAPPCFNIDGVNYIFIKQSGLYFVCTTKYNVSPNFALELLARLAKLFKDYCGVLSEEAIRKNFVLIYELLDEVLDYGYPMVSSTEQLKVHVHNEPVMVDMIKQANSFKMPT-MNQKTTPSSSVYKPVTLA-AKSGQQRNEIFVDILERLTMLFNGNGYTLSSHIDGSIVMKSYLSG 221          
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Match: A0A7S3MBD4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBD4_9STRA)

HSP 1 Score: 261 bits (666), Expect = 6.020e-85
Identity = 125/214 (58.41%), Postives = 164/214 (76.64%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEGGDPPPCFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSLRLPASLKTKTAPSSSVQKPVSGGNQKSGTQRNEIFVDILERLNVLFSQSGQVVNSSIDGCIQMKSYLSG 219
            I QFFILSPRGDTII+KD+RG+ + G  D FFRKVKFW+ GD PP F ID ++Y+++R+N LL   ++++NVSPS  +ELLNR+AKVFKDYCGVL+EE+IRKNFIL+YELLDE LDYGYPQ TSTE L+N V NE ++V       +  ++ + T  +++   P++  N + G  +NEI+VDI+ERL +LFS +G VVNSSIDG I MKS+LSG
Sbjct:   20 IGQFFILSPRGDTIINKDFRGDAIPGQQDLFFRKVKFWDKGDSPPVFQIDDISYIFIRRNQLLIVCTTKYNVSPSATIELLNRMAKVFKDYCGVLTEESIRKNFILIYELLDEMLDYGYPQITSTEMLKNCVHNEAVVVAKPSMTSVMGTIGSGTKSANAANVPITMMNTRGGANKNEIYVDIVERLTILFSNTGYVVNSSIDGSIMMKSFLSG 233          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2889.7874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJR2_ECTSI2.870e-14292.69Coatomer protein complex, gamma sub-unit n=1 Tax=E... [more]
A0A835YW81_9STRA1.140e-10974.43Coatomer protein complex, gamma sub-unit n=1 Tax=T... [more]
A0A7S2S1C5_9STRA1.880e-10067.74Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A4D9D754_9STRA1.180e-9667.91MHD domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2SFF0_9STRA7.900e-9263.80Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
F0Y376_AURAN7.210e-9065.02MHD domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S2UX12_9STRA1.730e-8761.88Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1C3I7_9STRA7.700e-8763.47Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2R5G7K4_9STRA2.060e-8561.82AP-4 complex subunit mu n=1 Tax=Hondaea fermentalg... [more]
A0A7S3MBD4_9STRA6.020e-8558.41Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001392Clathrin adaptor, mu subunitPRINTSPR00314CLATHRINADPTcoord: 102..129
score: 65.26
coord: 16..36
score: 35.5
coord: 172..200
score: 32.29
NoneNo IPR availableGENE3D3.30.450.60coord: 5..143
e-value: 1.4E-47
score: 163.1
NoneNo IPR availableGENE3D2.60.40.1170coord: 180..219
e-value: 5.4E-14
score: 54.3
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 6..219
NoneNo IPR availablePANTHERPTHR10529:SF270AP-4 COMPLEX SUBUNIT MU-1coord: 6..219
IPR028565Mu homology domainPFAMPF00928Adap_comp_subcoord: 179..219
e-value: 3.2E-10
score: 39.8
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 181..219
score: 10.897
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 179..219
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 6..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2889contigH-paniculata_contig2889:239..4884 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2889.7874.1mRNA_H-paniculata_contig2889.7874.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2889 239..4884 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2889.7874.1 ID=prot_H-paniculata_contig2889.7874.1|Name=mRNA_H-paniculata_contig2889.7874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MSIAPISQFFILSPRGDTIISKDYRGNVVAGTTDTFFRKVKFWEGGDPPP
CFNIDGVNYVYVRKNGLLFAVSSQWNVSPSMFLELLNRLAKVFKDYCGVL
SEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSL
RLPASLKTKTAPSSSVQKPVSGGNQKSGTQRNEIFVDILERLNVLFSQSG
QVVNSSIDGCIQMKSYLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001392Clathrin_mu
IPR028565MHD
IPR036168AP2_Mu_C_sf
IPR011012Longin-like_dom_sf