mRNA_H-paniculata_contig28878.7872.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig28878.7872.1
Unique NamemRNA_H-paniculata_contig28878.7872.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Match: A0A6H5LDZ0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDZ0_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 3.290e-41
Identity = 80/169 (47.34%), Postives = 112/169 (66.27%), Query Frame = 1 
Query:    1 WVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVADSSVKMVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLNKAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILCVHEDDVIVAGKNVECDALFAAL 507
            WVF WK DE G + K KARLVA+GF Q+H VD+LE F+PT   +S+++V+A+A + +  +  LD++Q F++  LD EVFMKLP GC   SG+IVRLNK++YGL+Q+ R + KRLV  L+  +   QS SDPCV R      V  I+ +H DD++ AG     + +  AL
Sbjct:  467 WVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLR-IGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEAL 634
[Close]
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 3.620e-41
Identity = 80/169 (47.34%), Postives = 112/169 (66.27%), Query Frame = 1 
Query:    1 WVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVADSSVKMVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLNKAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILCVHEDDVIVAGKNVECDALFAAL 507
            WVF WK DE G + K KARLVA+GF Q+H VD+LE F+PT   +S+++V+A+A + +  +  LD++Q F++  LD EVFMKLP GC   SG+IVRLNK++YGL+Q+ R + KRLV  L+  +   QS SDPCV R      V  I+ +H DD++ AG     + +  AL
Sbjct:  531 WVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLR-IGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEAL 698
[Close]
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Match: A0A6H5KHE8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE8_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 3.650e-41
Identity = 80/169 (47.34%), Postives = 112/169 (66.27%), Query Frame = 1 
Query:    1 WVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVADSSVKMVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLNKAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILCVHEDDVIVAGKNVECDALFAAL 507
            WVF WK DE G + K KARLVA+GF Q+H VD+LE F+PT   +S+++V+A+A + +  +  LD++Q F++  LD EVFMKLP GC   SG+IVRLNK++YGL+Q+ R + KRLV  L+  +   QS SDPCV R      V  I+ +H DD++ AG     + +  AL
Sbjct:  675 WVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLR-IGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEAL 842
[Close]
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 5.200e-41
Identity = 80/175 (45.71%), Postives = 114/175 (65.14%), Query Frame = 1 
Query:    1 WVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVADSSVKMVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLNKAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILCVHEDDVIVAGKNVECDALFAALRAEFQT 525
            W F+WK +++G +   KARLVARGFSQ  NVD+    +P  + +S+K+++AVA E    +   DVKQ +    LD EVF+KLP GCGDKS +I +  +A+YGL+QSGR W     + LV N    Q K+DPCVFR   + VV MI+ ++ DD++VAG + +C+ L A+L  +F T
Sbjct:  586 WCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPT 759
[Close]
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 5.650e-41
Identity = 80/175 (45.71%), Postives = 114/175 (65.14%), Query Frame = 1 
Query:    1 WVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVADSSVKMVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLNKAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILCVHEDDVIVAGKNVECDALFAALRAEFQT 525
            W F+WK +++G +   KARLVARGFSQ  NVD+    +P  + +S+K+++AVA E    +   DVKQ +    LD EVF+KLP GCGDKS +I +  +A+YGL+QSGR W     + LV N    Q K+DPCVFR   + VV MI+ ++ DD++VAG + +C+ L A+L  +F T
Sbjct:  786 WCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPT 959
[Close]
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Match: A0A6H5JQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD0_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 5.780e-41
Identity = 76/169 (44.97%), Postives = 110/169 (65.09%), Query Frame = 1 
Query:    1 WVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVADSSVKMVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLNKAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILCVHEDDVIVAGKNVECDALFAAL 507
            WVF W  DE   + K KARLVA+GF Q++ VD+LE F+PT   +S ++V+A+A + +  +   D++Q F++  LD+EVFMKLP GCG  SG++VRLNK++YGL+Q+ R + KRLV  L   +   QS SDPCV R      V  ++ +H DD++ AG     + + AAL
Sbjct:   31 WVFKWNADETAKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSEL-KRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTTSLAEVVVAAL 198
[Close]
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 6.140e-41
Identity = 80/175 (45.71%), Postives = 114/175 (65.14%), Query Frame = 1 
Query:    1 WVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVADSSVKMVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLNKAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILCVHEDDVIVAGKNVECDALFAALRAEFQT 525
            W F+WK +++G +   KARLVARGFSQ  NVD+    +P  + +S+K+++AVA E    +   DVKQ +    LD EVF+KLP GCGDKS +I +  +A+YGL+QSGR W     + LV N    Q K+DPCVFR   + VV MI+ ++ DD++VAG + +C+ L A+L  +F T
Sbjct: 1165 WCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPT 1338
[Close]
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 6.200e-41
Identity = 80/175 (45.71%), Postives = 114/175 (65.14%), Query Frame = 1 
Query:    1 WVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVADSSVKMVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLNKAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILCVHEDDVIVAGKNVECDALFAALRAEFQT 525
            W F+WK +++G +   KARLVARGFSQ  NVD+    +P  + +S+K+++AVA E    +   DVKQ +    LD EVF+KLP GCGDKS +I +  +A+YGL+QSGR W     + LV N    Q K+DPCVFR   + VV MI+ ++ DD++VAG + +C+ L A+L  +F T
Sbjct: 1185 WCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPT 1358
[Close]
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 6.280e-41
Identity = 80/175 (45.71%), Postives = 114/175 (65.14%), Query Frame = 1 
Query:    1 WVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVADSSVKMVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLNKAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILCVHEDDVIVAGKNVECDALFAALRAEFQT 525
            W F+WK +++G +   KARLVARGFSQ  NVD+    +P  + +S+K+++AVA E    +   DVKQ +    LD EVF+KLP GCGDKS +I +  +A+YGL+QSGR W     + LV N    Q K+DPCVFR   + VV MI+ ++ DD++VAG + +C+ L A+L  +F T
Sbjct: 1328 WCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPT 1501
[Close]
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 2.320e-40
Identity = 79/169 (46.75%), Postives = 110/169 (65.09%), Query Frame = 1 
Query:    1 WVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVADSSVKMVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLNKAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILCVHEDDVIVAGKNVECDALFAAL 507
            WVF WK DE G + K KARLVA+GF Q+H VD+LE F+PT   +S+++V+A+A + +  +  LD++Q F +  LD EV MKLP GC   SG+IVRLNK++YGL+Q+ R + KRLV  L+  +   QS SDPCV R      V  I+ +H DD++ AG     + +  AL
Sbjct:  262 WVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLR-IGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEAL 429
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28878.7872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LDZ0_9PHAE3.290e-4147.34CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J594_9PHAE3.620e-4147.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KHE8_9PHAE3.650e-4147.34CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JTV6_9PHAE5.200e-4145.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE5.650e-4145.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQD0_9PHAE5.780e-4144.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE6.140e-4145.71Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE6.200e-4145.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE6.280e-4145.71Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JV80_9PHAE2.320e-4046.75Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28878contigH-paniculata_contig28878:1..1312 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score82.0
Seed ortholog evalue2.3e-13
Seed eggNOG ortholog3712.Bo5g132790.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3884B@33090,3GZ1B@35493,3HXH8@3699,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelBrassicales
Best eggNOG OGNA|NA|NA
Exons2
Model size1258
Cds size414
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28878.7872.1prot_H-paniculata_contig28878.7872.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig28878 142..555 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929879.584682-UTR-H-paniculata_contig28878:0..1411622929879.584682-UTR-H-paniculata_contig28878:0..141Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig28878 1..141 +
1691481052.08476-UTR-H-paniculata_contig28878:0..1411691481052.08476-UTR-H-paniculata_contig28878:0..141Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig28878 1..141 +
1622929879.628688-UTR-H-paniculata_contig28878:555..7761622929879.628688-UTR-H-paniculata_contig28878:555..776Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig28878 556..776 +
1691481052.1073928-UTR-H-paniculata_contig28878:555..7761691481052.1073928-UTR-H-paniculata_contig28878:555..776Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig28878 556..776 +
1622929879.644019-UTR-H-paniculata_contig28878:830..13121622929879.644019-UTR-H-paniculata_contig28878:830..1312Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig28878 831..1312 +
1691481052.116841-UTR-H-paniculata_contig28878:830..13121691481052.116841-UTR-H-paniculata_contig28878:830..1312Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig28878 831..1312 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929879.6090276-CDS-H-paniculata_contig28878:141..5551622929879.6090276-CDS-H-paniculata_contig28878:141..555Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig28878 142..555 +
1691481052.09795-CDS-H-paniculata_contig28878:141..5551691481052.09795-CDS-H-paniculata_contig28878:141..555Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig28878 142..555 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig28878.7872.1

>prot_H-paniculata_contig28878.7872.1 ID=prot_H-paniculata_contig28878.7872.1|Name=mRNA_H-paniculata_contig28878.7872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
MVIAVAVENDWGMWKLDVKQDFIRVNLDFEVFMKLPEGCGDKSGRIVRLN
KAMYGLEQSGRMWSKRLVEVLVNNVSMTQSKSDPCVFRLEKNGVVHMILC
VHEDDVIVAGKNVECDALFAALRAEFQTTRGEQFGVI*
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mRNA from alignment at H-paniculata_contig28878:1..1312+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig28878.7872.1 ID=mRNA_H-paniculata_contig28878.7872.1|Name=mRNA_H-paniculata_contig28878.7872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1312bp|location=Sequence derived from alignment at H-paniculata_contig28878:1..1312+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGGTATTTGCATGGAAAATTGATGAGCAGGGGAACGTTACAAAGCCAAA
GGCAAGGCTTGTAGCTCGAGGGTTTAGCCAGCAACACAACGTTGATTTTC
TCGAAGTGTTTGCTCCTACGGTAGCCGATTCCAGTGTGAAAATGGTAATT
GCTGTTGCCGTCGAAAATGACTGGGGAATGTGGAAACTTGATGTAAAACA
GGATTTTATTCGGGTGAATTTAGATTTCGAGGTGTTCATGAAGCTTCCAG
AGGGTTGCGGGGACAAGAGCGGTAGGATAGTAAGGCTGAATAAGGCTATG
TATGGGCTCGAGCAGTCAGGACGGATGTGGTCAAAGCGCCTTGTAGAAGT
ACTCGTAAATAACGTCAGCATGACGCAATCCAAGTCTGACCCTTGTGTGT
TTAGGCTGGAGAAAAATGGGGTGGTACATATGATTCTGTGTGTTCATGAA
GATGATGTAATTGTTGCTGGCAAAAATGTGGAGTGCGATGCCCTGTTTGC
GGCGTTGAGGGCGGAGTTCCAAACCACGAGAGGCGAGCAATTTGGCGTGA
TATAGTGAGGGGAGTTGTCCACATCACGCAACGGACATTCGTTTACACTG
TCATTAAACGTTTTGACATGGAAACCGAGCCTAACCTTCCTGCGTCTCAA
CAGGCAGATCTTGGGCCTAGGAGGGAGGATGAGGAATTGTCTGACAAGCC
TGTGCGCTCGGCTGTTGGGAGTTTGATATGGTTACGTGGTATGACGAGAG
CTGACATAGCCAGTGCAGTACGGGCAGTAGCGAGGCAAGCCCACAATCCG
ACGGATAGGCACTGGAAAGCAGTGGTAAAGATCATCTCGCATCTCAAGAG
AACGAAAGACTTGGGGCTAGTGTTCGAAAGGGGTAGAGATCTTAATCTGT
CAGTATATGTAGACGCAGATTATGCGGATAAGTTCAACTGGACGCGTTCA
GTGTCAGGCGTGGCAGTAATGTTAGGGAGGGCGTAGTGAGCGCTACCAGC
ACGACACAGCACTGTGCGACTCTTTCCACGAGTGAGGCAGAATATGTAGC
TATGGCGCAAGGGGCTAAGGCAGCACTTTTCACGAGAGCCGTGCTGGAGT
TTTTGCAGCCGCAACTTTCTGGTAGGATAATTACGATGTTCGAAGACAAC
CAGGGGGCAAAAGCTATGGCTGAGAATCCAACTAGTGCGGGTAGGAGCAA
GCACATAGACGTAAGGTATCACTTCATTCGAGAGTTGATTACGAGGAAAG
TATTGAGGGTAGAATACAAGAAGGGTGAGGACCACCCGGCTGACATCCTG
ACCAAACCGCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig28878:1..1312+

>mRNA_H-paniculata_contig28878.7872.1 ID=mRNA_H-paniculata_contig28878.7872.1|Name=mRNA_H-paniculata_contig28878.7872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig28878:1..1312+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTAATTGCTGTTGCCGTCGAAAATGACTGGGGAATGTGGAAACTTGA
TGTAAAACAGGATTTTATTCGGGTGAATTTAGATTTCGAGGTGTTCATGA
AGCTTCCAGAGGGTTGCGGGGACAAGAGCGGTAGGATAGTAAGGCTGAAT
AAGGCTATGTATGGGCTCGAGCAGTCAGGACGGATGTGGTCAAAGCGCCT
TGTAGAAGTACTCGTAAATAACGTCAGCATGACGCAATCCAAGTCTGACC
CTTGTGTGTTTAGGCTGGAGAAAAATGGGGTGGTACATATGATTCTGTGT
GTTCATGAAGATGATGTAATTGTTGCTGGCAAAAATGTGGAGTGCGATGC
CCTGTTTGCGGCGTTGAGGGCGGAGTTCCAAACCACGAGAGGCGAGCAAT
TTGGCGTGATATAGATGGTAATTGCTGTTGCCGTCGAAAATGACTGGGGA
ATGTGGAAACTTGATGTAAAACAGGATTTTATTCGGGTGAATTTAGATTT
CGAGGTGTTCATGAAGCTTCCAGAGGGTTGCGGGGACAAGAGCGGTAGGA
TAGTAAGGCTGAATAAGGCTATGTATGGGCTCGAGCAGTCAGGACGGATG
TGGTCAAAGCGCCTTGTAGAAGTACTCGTAAATAACGTCAGCATGACGCA
ATCCAAGTCTGACCCTTGTGTGTTTAGGCTGGAGAAAAATGGGGTGGTAC
ATATGATTCTGTGTGTTCATGAAGATGATGTAATTGTTGCTGGCAAAAAT
GTGGAGTGCGATGCCCTGTTTGCGGCGTTGAGGGCGGAGTTCCAAACCAC
GAGAGGCGAGCAATTTGGCGTGATATAG
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