mRNA_H-paniculata_contig2887.7870.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2887.7870.1
Unique NamemRNA_H-paniculata_contig2887.7870.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 197 bits (502), Expect = 3.260e-55
Identity = 121/333 (36.34%), Postives = 186/333 (55.86%), Query Frame = 1
Query:    1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRR-EKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVET-FIDANSAEDFEGRKSTTGYV 993
            GN++RYK RLVAQG+SQ+   D+ E  APV R+ +      +AA  D E+  + V  AYLN  +E++ +++ P  +   S  +    RLR++LY LKQSG  WN    D  L  IG  +   + C+Y    EG  T  ++ V+VDDL+I     E + E K  +   F +KDLG   +++ IE++RDR NGTI++SQ  YI  VL R+G    R V TL++  V  L   + D   +P  +G    ++GSL+YA  GT+ D++HAV +      +P  E  +  +R+ RYL+   +L + F     G+++ T + DA+ A + + RKS +GY 
Sbjct:   30 GNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVC---RLRKTLYGLKQSGCEWNWE-FDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTLLDPNVI-LKKRTDDLIADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISGYT 355          
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 201 bits (510), Expect = 1.830e-53
Identity = 121/333 (36.34%), Postives = 187/333 (56.16%), Query Frame = 1
Query:    1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRR-EKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVET-FIDANSAEDFEGRKSTTGYV 993
            GN++RYK RLVAQG+SQ+   D+ E  APV R+ + R    +AA  D E+  + V  AYLN  +E++ +++ P  +   S  +    RLR++LY LKQSG+ WN    D  L  IG  +   + C+Y    EG  T  ++ V+VDDL+I     E + E K  +   F +KDLG   +++ IE++RDR NGTI++SQ  YI  VL R+G    R V T ++  V  L   + D   +P  +G    ++GSL+YA  GT+ D++HAV +      +P  E  +  +R+ RYL+   +L + F     G+++ T + DA+ A + + RKS +GY 
Sbjct:  937 GNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVC---RLRKTLYGLKQSGREWNRE-FDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVI-LKKRTDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISGYT 1262          
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 199 bits (505), Expect = 8.670e-53
Identity = 133/341 (39.00%), Postives = 191/341 (56.01%), Query Frame = 1
Query:    1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIP--FLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGR-REKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGV--PTLVEGKVKNLAPESADKPPEPKPLGAVLG---MVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGK--SNGDVVETFIDANSAEDFEGRKSTTGYV 993
            GN+ RYK+R+VA+GF+Q E  D+ E+ APVA + + R + +LAA+HD EL+ + V  AYLN  + +  ++ LP    P   DIP     +L++SLY LKQ+G+ WN  + D  L  +G  R   E CLY  R EGG+   LV VYVDDL++A   R  +DE K  ++  F+M+DLG  S VL I++RRDR    I +SQ  YI  VLKR G ++C+ V  P   + ++    P + D   E       +    +VGSL+YA+ GT+ D+A+A         +P R      +R+ RYL    DL + F G   S       + DA+ + D E  KST+GYV
Sbjct: 1061 GNIERYKIRIVARGFTQREGVDYQEVFAPVANLESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYL-LP----PDGVDIPKGHCWKLKKSLYGLKQAGRTWNK-TFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKRCHWEAAKRVLRYLKGTRDLELQFDGNDVSMDMSFHGYSDADWSGDPETSKSTSGYV 1394          
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: W8C3B0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8C3B0_CERCA)

HSP 1 Score: 192 bits (487), Expect = 7.320e-51
Identity = 118/334 (35.33%), Postives = 197/334 (58.98%), Query Frame = 1
Query:    1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPF-LRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRREKVDEF-KHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDAN-SAEDFEGRKSTTGYV 993
            G + R+K RLVA+G SQ+   ++ +  +PV R ST R +F+LAAE++  L  + V+ A+LN  ++   ++  P  F   SRD P  + +L+++LY LKQ+G+ WN   L + LV+IG ++  TEPC+Y   +  G+   L+AVYVDDL+IA   ++  +F K  IS+ F++ D G +   L++EV R+   G IAI Q G+I+++L+++   ECR + T ++ K +    +S  K  + +   +   ++GSL+Y    T+ D+ H V + A +  +P+ E L+  +R+ RYL   +D  + +     G  ++ + DA+   E FE RKS TGYV
Sbjct:  386 GEINRFKARLVAKGCSQIYGVNYTDTFSPVVRYSTIRIIFALAAEYELYLHHVDVSTAFLNGKVDDDIYMAQPEAFV--SRDHPNKVLKLKKALYGLKQAGRQWNVK-LHEILVKIGFKQCVTEPCVYTKHH--GDKINLLAVYVDDLLIASSHKQELQFIKQQISKYFQVVDKGPVELFLSMEVERNGEKGAIAIRQKGHIKQLLQQHNMLECRPIATPLDAKQQINCIDSECKRVDKQEYQS---LIGSLLYLALCTRPDIMHTVCKLAQQNSEPHSEHLAAAKRVLRYLCFTTDFALRYY--KTGSSIQCYADADWGGESFE-RKSYTGYV 708          
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU)

HSP 1 Score: 189 bits (481), Expect = 1.320e-49
Identity = 122/343 (35.57%), Postives = 192/343 (55.98%), Query Frame = 1
Query:    1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGR-REKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVL---------GMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKS-NGDV-VETFIDANSAEDFEGRKSTTGYV 993
            G + RYK+R+VA+GF+Q    D+ ++ APVA + + R + +LAA +D EL+ + V+ AYLN  ++++ ++  P      + +     RL+ SLY LKQ+G+ WN  +LD  L  +G  R  +E CLY  R++ G+   LV VYVDDL++A   R  +DE K  ++ +F+M+DLG  S +L I +RRDRP   I +SQ  YI  VL RYG  +C+   T +   VK     SAD P +   L ++           ++GS++YA+ GT+ D+A+ V        +P R      +R  RYL    D+ + F G    GD+    + DA+ + D +  +ST+G+V
Sbjct: 1041 GGIERYKIRIVARGFTQKPGIDYQDVFAPVANLESVRIILALAARYDLELDQMDVSAAYLNGELDEELYLMPPDGV---AIEPGHCWRLKRSLYGLKQAGRTWNK-TLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVK----PSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLVGVLGRYSANPKRCHWEMAKRGLRYLKATRDMELRFDGSDVAGDMDFHGYSDADWSGDRDTSRSTSGFV 1374          
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A535F6U2_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F6U2_9CHLR)

HSP 1 Score: 188 bits (478), Expect = 3.250e-49
Identity = 114/332 (34.34%), Postives = 183/332 (55.12%), Query Frame = 1
Query:    1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRREK-VDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYV 993
            GN+ R+K RLVA+GFSQ    D+FE  APVA+++T+RT+F+LAA   +E+ G+ V  AYL   + ++ ++  P  F         + RL  SLY LKQ+ + WN   +  FL+++G  RS  +PCLY  +         + ++VDDL+I G+  + +   K  ++  F MKDLG L   L + + R   NG+I+I Q GYIR++L+R+G +  + V T +    + +  E+         +     MVGSL+YA+  ++ D+A+A+ Q +    +P        +R+FRYL      G+ + G +    V  + DA+ A D + RKS +GYV
Sbjct:  956 GNIVRFKARLVARGFSQAYGVDYFETYAPVAKLTTYRTIFALAALEQWEIHGMDVITAYLLGKLNEEIYMMQPEGFVRMGMKRNMVCRLLRSLYGLKQAARVWNQK-IHAFLIKLGFVRSNADPCLYIKKF------LYITIWVDDLLIVGKNGRDIANVKGQLAGEFEMKDLGKLEYFLGMRIMRSL-NGSISIDQNGYIRQILERFGMEASKPVSTPIATGTRLVIGETESN------IKQYQAMVGSLMYAMLCSRPDLAYAIQQLSQFNSNPTNAHFQAAKRVFRYLQGSQATGLVY-GSNITTPVLGYCDADYAADGD-RKSISGYV 1271          
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 187 bits (474), Expect = 1.120e-48
Identity = 120/339 (35.40%), Postives = 192/339 (56.64%), Query Frame = 1
Query:    1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRREKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAV--LGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYVSS*TGG 1011
            G++ ++K RLVAQG++Q+   DF E  APVA++S+ RT+ +LAA +D+ELE + V  AYLN  ++++ +++ P    P   +   +  L+++LY LKQ+G+ W   +L + +  +G  R  ++  +++ R   G++  +VA  VD L IAG R+ V +FK  IS RF M DLG++  +L IEV+RDR   TIAISQ  YI  V  R+  +    V T ++        +S   P +   +  V     VGSL+YA+ GT+ D+A AV   +  M++P R      +R+ RYL    +L + +    +G  ++ F DA+     E R S +GYV +  GG
Sbjct: 1022 GSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLE-HLVCCLKKTLYGLKQAGRGWYK-TLSNRMAEMGFTRCASDHAVWYKR--AGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVYGTSDDG--IQGFSDADWGSSTEHRHSISGYVFTLDGG 1354          
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A177VA33_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177VA33_9BASI)

HSP 1 Score: 187 bits (474), Expect = 1.170e-48
Identity = 119/332 (35.84%), Postives = 184/332 (55.42%), Query Frame = 1
Query:    1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRREK-VDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYV 993
            G  AR+K RLVAQGFSQ    D+ E  APVAR++T R + +LA  H  ++  + V  AYLN  I +  F+  P  F   S  +  LRR   SLY LKQSG+ W +  +  +L   GL  + +EPC++  R+  G    ++ +YVDD++IA + +  +D  + + S+RFRM D G LS+VL ++V  +   GT  ISQ  YI  +++R+G DE   V + +   ++ L     D       +     ++G  ++A  GT+ D+A+AV + A  M +P  E +    R+ RYL   S +G+ F  +SN  + E F DA+ A+D + R+S +GY 
Sbjct: 1361 GMAARWKARLVAQGFSQKAGIDYDETFAPVARLTTIRILVALALRHKMKIWSMDVVTAYLNGTITEDIFMMQPPNFDDGSGRVCKLRR---SLYGLKQSGREWFS-VVATWLKAQGLWPTQSEPCVFTKRDRYGNA-IIIVLYVDDVLIACQNQSTIDSIRDSFSQRFRMTDNGPLSQVLGLKVDINHDAGTATISQQAYIDSIIRRFGMDEANAVDSPMTAALQGLG-RRTDGQATAAEICVFASLIGCEMWAAQGTRPDIAYAVSRLARFMANPRPEHIVGAYRLLRYLKGTSGIGLVFTDESNVQI-EGFCDADHAKDHDNRRSVSGYA 1685          
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A177TIS2_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177TIS2_9BASI)

HSP 1 Score: 186 bits (473), Expect = 1.240e-48
Identity = 119/332 (35.84%), Postives = 184/332 (55.42%), Query Frame = 1
Query:    1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRREK-VDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYV 993
            G  AR+K RLVAQGFSQ    D+ E  APVAR++T R + +LA  H  ++  + V  AYLN  I +  F+  P  F   S  +  LRR   SLY LKQSG+ W +  +  +L   GL  + +EPC++  R+  G    ++ +YVDD++IA + +  +D  + + S+RFRM D G LS+VL ++V  +   GT  ISQ  YI  +++R+G DE   V + +   ++ L     D       +     ++G  ++A  GT+ D+A+AV + A  M +P  E +    R+ RYL   S +G+ F  +SN  + E F DA+ A+D + R+S +GY 
Sbjct:  576 GMAARWKARLVAQGFSQKAGIDYDETFAPVARLTTIRILVALALRHKMKIWSMDVVTAYLNGTITEDIFMMQPPNFDDGSGRVCKLRR---SLYGLKQSGREWFS-VVATWLKAQGLWPTQSEPCVFTKRDRYGNA-IIIVLYVDDVLIACQNQSTIDSIRDSFSQRFRMTDNGPLSQVLGLKVDINHGAGTATISQQAYIDSIIRRFGMDEANAVDSPMTAALQGLG-RRTDGQATAAEICVFASLIGCEMWAAQGTRPDIAYAVSRLARFMANPRPEHIVGAYRLLRYLKGTSGIGLVFTDESNVQI-EGFCDADHAKDHDNRRSVSGYA 900          
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: Q6L4X8_ORYSJ (Putative polyprotein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q6L4X8_ORYSJ)

HSP 1 Score: 186 bits (472), Expect = 1.930e-48
Identity = 115/333 (34.53%), Postives = 195/333 (58.56%), Query Frame = 1
Query:   10 ARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFF-PFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGR-REKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVK---NLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYV 993
            ARYK RLVA+G+SQ+   DF ++ +PV + S+ RT+ S+ A HD+ELE + V  A+L+  +E+  +++ P  F  P   ++ +  RL++SLY LKQS + W     D F+     +RS  + C+Y    +G     L+  YVDD++IA + + ++++ K  +S  F MKDLG+  ++L +E+ R+R +G + +SQ GYI +VL+R+   + + V T +    +   +L P+S D   E       L +VGSL+YA+  ++ D++HA+   +  M +P +E     + IF+YL   S   + F G+S   +V  ++D++ A D + R+S TGYV
Sbjct:  757 ARYKARLVAKGYSQIPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVY--RLKKSLYGLKQSPRQWYKR-FDSFMFSQKFRRSNYDSCVYLKVVDGSSIYLLL--YVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQS-DYDIEYMSRVPYLSVVGSLMYAMVCSRLDLSHALSVVSRYMANPGKEHWKVVQWIFKYLRGTSSACLQF-GRSRDGLVG-YVDSDFAGDLDRRRSLTGYV 1081          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A284R853_ARMOS3.260e-5536.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284QR88_ARMOS1.830e-5336.34Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A409WVI7_9AGAR8.670e-5339.00Integrase catalytic domain-containing protein (Fra... [more]
W8C3B0_CERCA7.320e-5135.33Retrovirus-related Pol polyprotein from transposon... [more]
A0A1M2VT18_TRAPU1.320e-4935.57Retrovirus-related Pol polyprotein from transposon... [more]
A0A535F6U2_9CHLR3.250e-4934.34DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A060S825_PYCCI1.120e-4835.40CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A177VA33_9BASI1.170e-4835.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A177TIS2_9BASI1.240e-4835.84Integrase catalytic domain-containing protein n=1 ... [more]
Q6L4X8_ORYSJ1.930e-4834.53Putative polyprotein n=2 Tax=Oryza sativa subsp. j... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2887contigH-paniculata_contig2887:2081..3282 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score156.4
Seed ortholog evalue2.1e-35
Seed eggNOG ortholog4081.Solyc12g009540.1.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial protein
EggNOG OGs37THH@33090,3GG2K@35493,44UC5@71274,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelasterids
Best eggNOG OGNA|NA|NA
Exons2
Model size1136
Cds size906
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2887.7870.1prot_H-paniculata_contig2887.7870.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2887 2215..3186 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929879.4900343-UTR-H-paniculata_contig2887:2080..22141622929879.4900343-UTR-H-paniculata_contig2887:2080..2214Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2887 2081..2214 -
1691481052.035412-UTR-H-paniculata_contig2887:2080..22141691481052.035412-UTR-H-paniculata_contig2887:2080..2214Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2887 2081..2214 -
1622929879.5433087-UTR-H-paniculata_contig2887:3186..32821622929879.5433087-UTR-H-paniculata_contig2887:3186..3282Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2887 3187..3282 -
1691481052.0745752-UTR-H-paniculata_contig2887:3186..32821691481052.0745752-UTR-H-paniculata_contig2887:3186..3282Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2887 3187..3282 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929879.5108118-CDS-H-paniculata_contig2887:2214..24851622929879.5108118-CDS-H-paniculata_contig2887:2214..2485Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2887 2215..2485 -
1691481052.0493624-CDS-H-paniculata_contig2887:2214..24851691481052.0493624-CDS-H-paniculata_contig2887:2214..2485Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2887 2215..2485 -
1622929879.5272963-CDS-H-paniculata_contig2887:2551..31861622929879.5272963-CDS-H-paniculata_contig2887:2551..3186Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2887 2552..3186 -
1691481052.0630407-CDS-H-paniculata_contig2887:2551..31861691481052.0630407-CDS-H-paniculata_contig2887:2551..3186Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2887 2552..3186 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2887.7870.1

>prot_H-paniculata_contig2887.7870.1 ID=prot_H-paniculata_contig2887.7870.1|Name=mRNA_H-paniculata_contig2887.7870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=302bp
MSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRD
IPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNE
GGETDTLVAVYVDDLVIAGRREKVDEFKHNISRRFRMKDLGSLSRVLAIE
VRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESAD
KPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLST
CRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYVS
S*
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mRNA from alignment at H-paniculata_contig2887:2081..3282-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2887.7870.1 ID=mRNA_H-paniculata_contig2887.7870.1|Name=mRNA_H-paniculata_contig2887.7870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1202bp|location=Sequence derived from alignment at H-paniculata_contig2887:2081..3282- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCAACGTGGCACGCTACAAAGTGCGACTGGTGGCTCAAGGGTTTTCACA GGTGGAGGATGAGGATTTCTTTGAAATCAGTGCCCCTGTAGCTCGCATGT CGACGTTTCGTACTGTTTTTAGCCTGGCCGCCGAACATGATTTCGAATTA GAAGGCATACACGTAAATGTGGCGTATTTGAATGCCCCCATAGAACAAAA GCCGTTTGTTAAGCTACCCTCCGAGTTTTTCCCTTTCTCTCGAGACATAC CATTTTTGCGCCGCCTGCGTGAAAGCCTGTATTGCCTCAAGCAGAGCGGT CAAAACTGGAATAACAACAGTCTTGACGATTTTCTTGTTCGTATAGGACT CCAGCGTTCCACTACCGAGCCATGCTTGTACTTCTCTCGCAACGAAGGGG GAGAGACAGACACTCTCGTGGCCGTCTATGTTGACGACCTGGTCATCGCT GGACGTCGTGAGAAAGTAGACGAGTTCAAACACAACATAAGTCGGCGTTT CAGGATGAAAGACTTGGGCTCCCTCTCGCGCGTGTTGGCAATAGAAGTAC GACGTGACCGCCCCAATGGTACCATAGCAATATCTCAAGGTGGCTACATC CGCGAGGTACTGAAAAGATACGGTTTTGACGAGTGTCGAGGCGTGCCCAC CCTTGTAGAGGGAAAAGTGAAAAATTTGGCACCCGAGTCGGCCGACAAGC CCCCCGAACCAAAACCGCTTGGGGCTGTACTGTCGGACATAGGTGCAGGA GTACAAGAAAGCAGTTGTTGGAGAAATGGCAATTCATCTTAATACAGTGG CATGGTAGGATCACTCGTGTACGCCTTGACAGGAACTAAATATGATGTAG CACACGCGGTACACCAAGCAGCATGTCGTATGGAGGACCCTTATCGGGAA GACTTGAGTACATGCAGGCGCATTTTTCGTTATCTCAGTATTGTGTCTGA CCTCGGCATTACGTTCTGTGGTAAGAGTAACGGCGACGTTGTGGAAACAT TCATTGATGCCAATTCGGCGGAAGATTTCGAGGGCCGAAAGTCCACAACA GGATACGTATCAAGCTGAACTGGGGGGCGATAAGTCGGTGCTCCAGGATG CAACAGTTAGTTACGTGGTCCAGCATGGAGGCAGAGTACGTTGCTGCAGG AGAAGCGGGAAAGGAGACGGTATATCTTAGGGACTTACTAGGATCGATAG GT
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Coding sequence (CDS) from alignment at H-paniculata_contig2887:2081..3282-

>mRNA_H-paniculata_contig2887.7870.1 ID=mRNA_H-paniculata_contig2887.7870.1|Name=mRNA_H-paniculata_contig2887.7870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1812bp|location=Sequence derived from alignment at H-paniculata_contig2887:2081..3282- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGACGTTTCGTACTGTTTTTAGCCTGGCCGCCGAACATGATTTCGA
ATTAGAAGGCATACACGTAAATGTGGCGTATTTGAATGCCCCCATAGAAC
AAAAGCCGTTTGTTAAGCTACCCTCCGAGTTTTTCCCTTTCTCTCGAGAC
ATACCATTTTTGCGCCGCCTGCGTGAAAGCCTGTATTGCCTCAAGCAGAG
CGGTCAAAACTGGAATAACAACAGTCTTGACGATTTTCTTGTTCGTATAG
GACTCCAGCGTTCCACTACCGAGCCATGCTTGTACTTCTCTCGCAACGAA
GGGGGAGAGACAGACACTCTCGTGGCCGTCTATGTTGACGACCTGGTCAT
CGCTGGACGTCGTGAGAAAGTAGACGAGTTCAAACACAACATAAGTCGGC
GTTTCAGGATGAAAGACTTGGGCTCCCTCTCGCGCGTGTTGGCAATAGAA
GTACGACGTGACCGCCCCAATGGTACCATAGCAATATCTCAAGGTGGCTA
CATCCGCGAGGTACTGAAAAGATACGGTTTTGACGAGTGTCGAGGCGTGC
CCACCCTTGTAGAGGGAAAAGTGAAAAATTTGGCACCCGAGTCGGCCGAC
AAGCCCCCCGAACCAAAACCGCTTGGGGCTGTACTATGTCGACGTTTCGT
ACTGTTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGAAGGCATACA
CGTAAATGTGGCGTATTTGAATGCCCCCATAGAACAAAAGCCGTTTGTTA
AGCTACCCTCCGAGTTTTTCCCTTTCTCTCGAGACATACCATTTTTGCGC
CGCCTGCGTGAAAGCCTGTATTGCCTCAAGCAGAGCGGTCAAAACTGGAA
TAACAACAGTCTTGACGATTTTCTTGTTCGTATAGGACTCCAGCGTTCCA
CTACCGAGCCATGCTTGTACTTCTCTCGCAACGAAGGGGGAGAGACAGAC
ACTCTCGTGGCCGTCTATGTTGACGACCTGGTCATCGCTGGACGTCGTGA
GAAAGTAGACGAGTTCAAACACAACATAAGTCGGCGTTTCAGGATGAAAG
ACTTGGGCTCCCTCTCGCGCGTGTTGGCAATAGAAGTACGACGTGACCGC
CCCAATGGTACCATAGCAATATCTCAAGGTGGCTACATCCGCGAGGTACT
GAAAAGATACGGTTTTGACGAGTGTCGAGGCGTGCCCACCCTTGTAGAGG
GAAAAGTGAAAAATTTGGCACCCGAGTCGGCCGACAAGCCCCCCGAACCA
AAACCGCTTGGGGCTGTACTTGGCATGGTAGGATCACTCGTGTACGCCTT
GACAGGAACTAAATATGATGTAGCACACGCGGTACACCAAGCAGCATGTC
GTATGGAGGACCCTTATCGGGAAGACTTGAGTACATGCAGGCGCATTTTT
CGTTATCTCAGTATTGTGTCTGACCTCGGCATTACGTTCTGTGGTAAGAG
TAACGGCGACGTTGTGGAAACATTCATTGATGCCAATTCGGCGGAAGATT
TCGAGGGCCGAAAGTCCACAACAGGATACGTATCAAGCTGATGGCATGGT
AGGATCACTCGTGTACGCCTTGACAGGAACTAAATATGATGTAGCACACG
CGGTACACCAAGCAGCATGTCGTATGGAGGACCCTTATCGGGAAGACTTG
AGTACATGCAGGCGCATTTTTCGTTATCTCAGTATTGTGTCTGACCTCGG
CATTACGTTCTGTGGTAAGAGTAACGGCGACGTTGTGGAAACATTCATTG
ATGCCAATTCGGCGGAAGATTTCGAGGGCCGAAAGTCCACAACAGGATAC
GTATCAAGCTGA
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