mRNA_H-paniculata_contig2886.7868.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2886.7868.1
Unique NamemRNA_H-paniculata_contig2886.7868.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Match: D8LBX4_ECTSI (Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX4_ECTSI)

HSP 1 Score: 790 bits (2040), Expect = 9.290e-274
Identity = 412/667 (61.77%), Postives = 502/667 (75.26%), Query Frame = 3
Query:   12 RSKAIALIATLVVSSGYAFVPPTLRPAPPRGAPTWGGSCSSRPGVSPLELSPLGSFSPLDSIANLFRGPNEDIPSLPQNDGNADQAQRKSELAEKQKDYRWSTEGIPVGTPYLEGFPPAEELPDVAWVTQLVGAFLKIAVGTIRGTVGVTEIVEAISDAGRARTFIQRISELIK-DGQVNERPVDIEDYEELHQFPVKTPKTVHDYEDDDAFARQRLQGGNCVVIEKCSAETRKKLKVLDSDPEYKASALKEKVDSLMKAGKLLVVDHDLLKDMESSPLDGTVERFLVPSIALFEVVDD-ILPIRPIGIQQLSQKEATPIFTPDDGYNWMIAKACFESADFIIHEVVSHLGFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPGAGVDRLQSNAIEDSWTMVLAEVVKRIAKDFSPPEDFAARGVTVEEFRGYYPYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMVDIAQFKWLSEFYTTSNKRELIAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPGSVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYDVGQFKDDRVQGPLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALNFGYTTLLPDNIPQSTNI 2006
            R+  +A++A LVV+ G AFV PT  P       T          V+PL ++    FS L SI + F    E   SLPQ D  ADQA RK +L E++K+YRWSTEG P G PYL+GFPP +ELP VAW+T LV + LKIAVGT+RG++G  EI+EA++D  +A+TF  R+ ELI  +  ++ERP DI DYE+LH FP+K PK+++D+EDD+AFAR RLQGGNCVV+EKC+  TR+KLKVLDSDP YK   LK KVDSLM  GKL VVDH+LLK          VER+L PS+ALFEV+DD +LPIRPIGIQ    +EATPIFTP+DG NW+IAKACFESADFI+HEVVSHLG TH+VLEGP+VA+NR LPK HP+  +L PH+EGTALINWGAQ+LLI P   +D LQ+N IE SW +VL +   RIA+DFSP  DFA+R +T E+F G YPYRD G +YWEA HTWVKEYLDIYY S+  +E+DYEL+A ++E+VDI +  WL ++YTT +K+ LIAKV+AS IY+AST HAAVNFPQKP MSFVPS PGSVY  PP DK+ERTFDE++NYLPPMEIAT+ V +LTLLGDIF+TKLGQY+   F DDR+  PL KFQQ IEDIEDDL   NA+++S WR R K  + A N  YTTLLPDNIPQS NI
Sbjct:    5 RTMKVAVLA-LVVAMGDAFVAPT--PRANNRPTTRTDRRVETSAVAPLNIA---GFS-LSSITDFFTSNREGETSLPQ-DPKADQAHRKEQLEERKKEYRWSTEGPPEGAPYLDGFPPNDELPSVAWITDLVASVLKIAVGTLRGSLGAGEIMEALTDPAKAKTFATRVRELISGNSAIDERPADIGDYEDLHAFPIKNPKSMYDWEDDEAFARLRLQGGNCVVLEKCTQSTREKLKVLDSDPVYKK--LKSKVDSLMDEGKLFVVDHELLKG---------VERYLTPSVALFEVIDDDLLPIRPIGIQLSQGEEATPIFTPEDGNNWLIAKACFESADFIMHEVVSHLGSTHIVLEGPMVAVNRCLPKEHPVYDLLKPHMEGTALINWGAQDLLIQPNGALDILQANDIESSWDLVLEQFFNRIAEDFSPEADFASRQITKEDFPGRYPYRDYGMRYWEATHTWVKEYLDIYYKSDKDVEEDYELQAMIEELVDIGKVYWLKDYYTTDDKKALIAKVIASWIYSASTLHAAVNFPQKPSMSFVPSCPGSVYAPPPIDKRERTFDEFMNYLPPMEIATIHVAMLTLLGDIFHTKLGQYETHNFDDDRIAEPLAKFQQAIEDIEDDLVADNADVVSGWRQRGKAKRAANNMAYTTLLPDNIPQSINI 652          
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Match: A0A6H5K920_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K920_9PHAE)

HSP 1 Score: 747 bits (1929), Expect = 1.200e-256
Identity = 365/606 (60.23%), Postives = 469/606 (77.39%), Query Frame = 3
Query:  192 SIANLFRGPNEDIPSLPQNDGNADQAQRKSELAEKQKDYRWSTEGIPVGTPYLEGFPPAEELPDVAWVTQLVGAFLKIAVGTIRGTVGVTEIVEAISDAGRARTFIQRISELIKDGQVNERPVDIEDYEELHQFPVKTPKTVHDYEDDDAFARQRLQGGNCVVIEKCSAETRKKLKVLDSDPEYKASALKEKVDSLMKAGKLLVVDHDLLKDMESSPLDGTVERFLVPSIALFEVVDD-ILPIRPIGIQQLSQKEATPIFTPDDGYNWMIAKACFESADFIIHEVVSHLGFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPGAGVDRLQSNAIEDSWTMVLAEVVKRIAKDFSPPEDFAARGVTVEEFRGYYPYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMVDIAQFKWLSEFYTTSNKRELIAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPGSVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYDVGQFKDDRVQGPLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALNFGYTTLLPDNIPQSTNI 2006
            S+ +LF  P+ +   LPQ D  AD + RK  LA+ QK+Y W T G P+  P+LEGFPP +ELP   WV++LV + L   VGT RG +G  EI+EA+S+  +A+ F  R+SELIK+ ++N+RPVDI DYE+LH +P+KTP +V D+++DDAFARQRLQG NCVV+EKCS  TR+KLKVLDSDP Y+   LK KVDSLMKAGKL VVD  ++K+++++PL+  V R+L P +ALFE VDD +LP++P+GIQ      ATPIFTPDDGYNW IAKACFE+ADFIIHEVVSHL  THVVLEGP+V+MNRQLPK HP+ A+ APH+EGTALINWGA  LL+   A VDRL +N IED+W ++  + ++RI+KDFSP  DFAARG+T  +F G YPYRD G KYW+AI+TWVKEYL++YY+++  + DDYEL+AFV+E+  + +FKWL+E+  +++K+ L+AKVLAS+IY+AST HAAVNFPQK  MSF PS P SVYV PPTDK ERTF++YL YLPP+EIAT QV + T LG++FYT LG Y+  QF D RV  PL KFQQ +EDIE D+ ++NA ++S+WR R K  + A NFGYTTLLP+ +PQS NI
Sbjct:   76 SLGSLFGSPDPET-CLPQ-DPKADTSGRKKRLAKAQKEYPWRTRGTPIDMPFLEGFPPKDELPSRTWVSKLVSSLLGAVVGTTRGNIGAGEIIEAVSNPAKAKNFATRVSELIKEAKINDRPVDINDYEDLHAWPIKTPDSVFDFDEDDAFARQRLQGPNCVVLEKCSEATRQKLKVLDSDPTYEN--LKNKVDSLMKAGKLFVVDQHIVKEVQTAPLED-VPRYLAPCVALFEAVDDELLPLKPVGIQLSQGDTATPIFTPDDGYNWKIAKACFEAADFIIHEVVSHLSNTHVVLEGPMVSMNRQLPKEHPVHALFAPHVEGTALINWGADELLMPADAAVDRLLANKIEDAWALIRVKTLERISKDFSPEVDFAARGMTKADFPGRYPYRDFGLKYWDAIYTWVKEYLNVYYSTDADITDDYELQAFVNELATVGEFKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVTPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEANQFSDQRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKEKRAAANFGYTTLLPEKVPQSINI 676          
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Match: A0A6H5KD72_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD72_9PHAE)

HSP 1 Score: 742 bits (1915), Expect = 1.190e-255
Identity = 364/605 (60.17%), Postives = 464/605 (76.69%), Query Frame = 3
Query:  195 IANLFRGPNEDIPSLPQNDGNADQAQRKSELAEKQKDYRWSTEGIPVGTPYLEGFPPAEELPDVAWVTQLVGAFLKIAVGTIRGTVGVTEIVEAISDAGRARTFIQRISELIKDGQVNERPVDIEDYEELHQFPVKTPKTVHDYEDDDAFARQRLQGGNCVVIEKCSAETRKKLKVLDSDPEYKASALKEKVDSLMKAGKLLVVDHDLLKDMESSPLDGTVERFLVPSIALFEVVDD-ILPIRPIGIQQLSQKEATPIFTPDDGYNWMIAKACFESADFIIHEVVSHLGFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPGAGVDRLQSNAIEDSWTMVLAEVVKRIAKDFSPPEDFAARGVTVEEFRGYYPYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMVDIAQFKWLSEFYTTSNKRELIAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPGSVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYDVGQFKDDRVQGPLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALNFGYTTLLPDNIPQSTNI 2006
            +  LF  PN +   LPQ D  AD A RK++L   ++D+ +     P+  P+LEGFPP ++ P ++WVT+L GA ++  VG  RGT+G+ EI+EA+SD  RA+TF++R+ ELI + +VNERPV+I DYE+LH FP+KTP  ++D+++DDAF RQRLQG  CVV+EKCS  TR+KLKVLD DP YK   LK+KVDSLMKAGKL VVDH L+KD+E+SPL+G + R+L PS+ALFE VDD +LP++P+GIQ      ATPIFTPDDGYNW IAKACFE+ADF+IH+VVSHLG TH+VLE P+V+M RQLPK HPI A+ APH+EGTALINWGA  LL+    GVDR+ +  I+ +W +  ++ ++RI+KDFSP  DFAARGVT  +F G YPYRDVG KYWEAIHTWVKEYLD+YY+S+  + DDYEL+AFV E+V + + KWL+E   +++++  +AKVLAS+IY+AS  HAAVNFPQ+P MSFVPS P S+YV PPTDK ER+F+EYL YLPP+EIA  QV    +LG +F+TKLG YD  QF D RVQ PL KFQQ IEDIE D+  +NA ++S+WR R K  K A NFGYTTLLPD +PQS NI
Sbjct:    5 LTGLFGSPNAET-CLPQ-DPKADTAGRKNQLDAAREDFVFRQRRTPIDMPFLEGFPPDDQRPSISWVTKLAGAIVRANVGATRGTIGIGEIIEAVSDPSRAKTFVKRLRELISEAKVNERPVNINDYEDLHAFPIKTPDAMYDFDEDDAFTRQRLQGPTCVVLEKCSEATRQKLKVLDFDPSYKN--LKDKVDSLMKAGKLFVVDHHLIKDVETSPLEG-IPRYLAPSVALFEAVDDELLPLKPLGIQLSQGDSATPIFTPDDGYNWKIAKACFEAADFVIHQVVSHLGNTHIVLEAPMVSMYRQLPKEHPIHALFAPHVEGTALINWGADELLMEVDGGVDRMLAPKIDYAWALTRSQTLERISKDFSPEVDFAARGVTKTDFPGRYPYRDVGLKYWEAIHTWVKEYLDVYYSSDVDISDDYELQAFVKELVTVGEVKWLAELENSTDQKVFLAKVLASLIYSASVLHAAVNFPQQPIMSFVPSNPPSIYVPPPTDKTERSFEEYLAYLPPLEIAAEQVVTGNILGTVFHTKLGDYDANQFSDKRVQAPLAKFQQAIEDIETDMVNENAFVVSSWRKRGKGKKAAANFGYTTLLPDKVPQSINI 604          
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Match: A0A835YNA1_9STRA (Lipoxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNA1_9STRA)

HSP 1 Score: 293 bits (749), Expect = 3.930e-82
Identity = 213/654 (32.57%), Postives = 342/654 (52.29%), Query Frame = 3
Query:  234 SLPQNDGNADQAQRKSELAEKQKDYRWSTEGIPVGTPYLEGFPPAEEL-------PDV-----AWVTQLVGAFLKIAVGTI----RGTV-------------------GVTEIV-EAISDAGRARTFIQRISELIKDGQVNERPVDIEDYEELHQFPVKTPKTVHDYE-DDDAFARQRLQGGNCVVIEKCSAETRK----KLKVLDSDPEYKASALKEKVDSLMKAGKLLVVDHDLLKDMESSPLDGTVERFLVPSIALFEVVDDI-----LPIRPIGIQ-QLSQKEATPIFTPD-------DGYNWMIAKACFESADFIIHEVVSHLGFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPGAGVDRLQSNAIEDSWTMVLAEVVKRIAKDFSPPEDFAARGVTV--EEFRGYYPYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMVDIAQFKWLSEFYTT-SNKRELIAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPGSVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYDVGQFK------DDRVQGPLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALNFGYTTLLPDNIPQSTNI 2006
            +LPQ+D + D   R+ ELA K K Y +S E +P GTP +   PPA+         P+V      W+ ++    L++AV  I    RGT                    G+ ++V   + D GR    I   +      +   RP  ++DY ++     K PK++  +   D+A+   RL G N   I+KC    +     +LK   + P+Y++  L+ ++ SL++AG+L  VD+       +    G  +    P +ALF +  D      +P+ P+ IQ + + KE   IF P        D Y W++AKAC + AD   HE ++HL  TH+V E    +MNRQL + HP+  +LAPH  GT +IN  A++ LI  G  VD L + ++++ + ++  EV K  A+DFS     A++G+    +EF   +PYRD G+K W AI  WV  Y++IYY S   +E+D E+KA+VD+++     KWL ++    ++ R L+ K+++++I+ AS  HAAVNFPQ P M + P+ P S+Y  PP+   E    +Y+    PME+A  Q  +  LLG + +T+LGQYD+  F+      +  +   L KF++ ++D    ++ +N +L++ W +  +  K A  + YT L PD +PQ  NI
Sbjct:   84 TLPQHDSDPDG--RRRELAHKLKLYTFSREELPKGTPMITDVPPADTAWSLGGNPPEVFLYKAGWLWKVATTALRVAVDFIPAKLRGTTREGLRGTGKFANPLTNVVGGIVDLVLSPLDDLGRDERSIDEKAAAPGGEKGATRPTSLQDYADMFGPLWKPPKSMAPHGITDNAYTWYRLAGPNPNAIQKCRTTDQPGVLTQLKDALAQPQYQS--LRSELKSLLEAGELYKVDYTWFHGTTTGVNQGPTQYMPSP-LALFRLNRDPEARSRMPLEPVLIQVEANSKE---IFQPPADESEGPDYYRWLMAKACVQVADNCHHEGIAHLSRTHLVTETFAGSMNRQLSERHPLHKLLAPHFWGTLIINNLARSALIAEGGTVDILLAPSLQELYPLITQEVKKWKARDFSFEAVMASQGMRDLRDEFPYMFPYRDDGSKIWNAICKWVSSYIEIYYKSAQDLENDAEVKAWVDDLIAY-DVKWLEDWGAPGTDNRPLLKKLVSAVIFNASAQHAAVNFPQTPLMCYTPAFPLSMYDPPPSLATEPEAHDYVRLFAPMEVAKTQKNVGLLLGTVRHTRLGQYDMAPFRRYFGTDNSDLTAALSKFRKDLDDARRAVDRRNRDLVAAWTAAGEKKKVAECYSYTLLRPDKVPQGINI 728          
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Match: A0A355CN11_9CYAN (Lipoxygenase n=2 Tax=unclassified Microcoleaceae TaxID=2053578 RepID=A0A355CN11_9CYAN)

HSP 1 Score: 263 bits (672), Expect = 1.350e-72
Identity = 167/494 (33.81%), Postives = 266/494 (53.85%), Query Frame = 3
Query:  564 IEDYEELHQFPVKTPKTVHDYEDDDAFARQRLQGGNCVVIEKCSAETRKKLKVLDSDPEY--KASALKEKVDSLMKAGKLLVVDHDLLKDMESSPLDGTVERFLVPSIALFEVVD------DILPIRPIGIQQLSQKEATPIFTPDDGYNWMIAKACFESADFIIHEVVSHLGFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPGAGVDRLQSNAIEDSWTMVL--AEVVKRIAKDFSPPEDFAARGVTVEEFRGYYPYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMVDI--AQFKWLSEFYTTSNKR-ELIAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPGSVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYDVGQFKDDRVQGPLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALNFGYTTLLPDNIPQSTNI 2006
            +EDY  L    ++ P+    +++D  FA  R+ G N +++++ S E  K L++ +   +   +     + +++ ++ G+L   D+ +LK+M        V+++    +ALF V         ++P+  I  QQ S  E  P+FTP DG NWM+AK   + AD   HE+VSHLG TH+ +E  V+A  R+LP  H +R +L PH EGT LIN+GA   LI  G  VD+L ++ IED   + +  A++      D   P+    +GV   +    +PYRD G   W+AIHTWV  YL IYYTS+  + +D  L+ +  E+V     + K   E  + + K    +   ++S+I+TAS  HAAVNFPQ   MS+ P+ P ++Y   PT  +++    +++ LP ++ +  Q+ +  LLG ++YT+LGQY+ G FKD +V   L +FQ  + DIE ++ ++N   +                 Y  LLP  IPQS NI
Sbjct:  140 LEDYNSLF-VDIRLPQISQRFQEDLIFAYMRVAGPNPLMLQQLS-EQNKPLQITNEKYQQIIEKFEFSDSLEAALQEGRLYQADYSMLKNMAQGSFPNNVKKYPCAPLALFAVPPVSSSFRSLIPVA-IQCQQPSVSENPPVFTPLDGDNWMVAKTIVQMADSNYHELVSHLGRTHLFVEPFVLATKRKLPANHKLRILLDPHFEGTILINYGAHKTLIANGGKVDQLLASTIEDDRVIAVEGAKIYLHNFNDVMFPKTLTKQGVRNSDQLPDHPYRDDGLLIWDAIHTWVGAYLSIYYTSDQQLLEDKALQNWAQELVSDQGGRLKNFGEDASGAIKTLNYLIDAVSSVIFTASAQHAAVNFPQSELMSYTPAFPFAIYSPAPTSSEKQ--GNFMSMLPSLDRSQTQIGVTYLLGSVYYTQLGQYNKGHFKDAKVMSYLGEFQNQLRDIEIEISKRNRSRL---------------MPYKFLLPSQIPQSINI 613          
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Match: UPI001C40356A (hypothetical protein n=1 Tax=Anthocerotibacter panamensis TaxID=2857077 RepID=UPI001C40356A)

HSP 1 Score: 257 bits (656), Expect = 1.170e-70
Identity = 194/615 (31.54%), Postives = 306/615 (49.76%), Query Frame = 3
Query:  228 IPSLPQNDGNADQAQRKSELAEKQKDYRWSTEGIPVGTPYLEGFPPAEELPDVAWVTQLVGAFLKIAVGTIRG-----------TVGVTEIVEAISDAGRARTFIQRISELIKDGQVNERPVDIEDYEELHQFPVKTPKTVHDYEDDDAFARQRLQGGNCVVIEKCSAETRKKLKVLDSDPEYKASALKEKVDSLMKAGKLLVVDHDLLKDME--SSPLDGTVERFLVPSIALFEVVDDILPIRPIGIQQLSQKEATPIFTPDDG-------YNWMIAKACFESADFIIHEVVSHLGFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPGAGVDRLQSNAIEDSWTMVLAEVVKRIAKDFSPPEDFAARGVTVEEFRGYYPYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMV--DIAQFKWLSEFYTTSNKRELIAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPGSVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYDVGQFKDDRVQGPLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALNFGYTTLLPDNIPQSTNI 2006
            +P LPQND N   A+R ++L + Q++Y+++   IP   P  E  P AE LP + W+  +  A LK+ + T++G           T      +   ++       ++ +  LI+        ++ ++Y+++ Q  +  P     + +D  FA  R+ G N +VI++ +  ++       +D +Y+    K+ +   +  G+L + D+ +L+ +E  S P D   +++L   +ALF V   IL   P+ IQ        P+FTP          + W++AK   + AD   HE++SHLG TH+++E  V+A +RQL   HP+  +L PH EGT  IN  AQ  L  PG  VD L +  I+ S T+ +  V   +      P+ F  RGV        YPYRD G   W AIH WV +YL +YY  +T +E D EL+ +V E++  D  +     E  +   +  LI  V   II+T+S  HAAVNF Q   MS+ P+ P + Y  PPT  +  T ++Y   LPP+  A  Q+++  LLG ++YTKLG Y      D R+Q  LR FQ  ++ +E  ++ +N +    +              YT L P  IPQS NI
Sbjct:    4 LPLLPQNDPNL--AERTAQLQQIQQEYQYNYTYIPP-LPMAEKLPFAE-LPSLKWLLLVGDAALKLMLNTLQGKHEDSLLDHLQTYSTFSNLLKQNNPQDVERRLKEVFTLIQSSYTEGEGLNWDEYKQIFQS-IPLPAISQTFMEDTEFAWLRVAGPNPLVIQRVNDSSQL---FWITDSQYQTVMPKDTLAQAVAQGRLYLADYSVLRTVEAGSYPQD---QKYLSAPLALFAVKAGIL--TPVAIQL---SPGGPLFTPTAAAASTQAYWTWLMAKTIVQIADANYHELISHLGRTHLLVEPFVLATHRQLAPNHPLNLLLTPHFEGTLSINDAAQKYLAGPGDPVDALLAGTIDASRTLTVEGVQSYVFNHSMLPDTFRQRGVEDPALLPDYPYRDDGLLVWNAIHQWVSDYLSVYYQDDTDLEHDTELQHWVKELLASDGGRMAGFGENGSIQTRAYLINAVTL-IIFTSSAQHAAVNFSQASLMSYAPAMPMAGYTPPPTSSQGATEEDYFKLLPPISQAQGQLSLTYLLGTVYYTKLGDYST--LVDPRIQTSLRSFQDQLQAVETTIKARNEDREHRYAP------------YTYLRPSLIPQSINI 587          
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Match: A0A3B8Y9X0_9CYAN (Lipoxygenase n=1 Tax=Cyanothece sp. UBA12306 TaxID=2055757 RepID=A0A3B8Y9X0_9CYAN)

HSP 1 Score: 256 bits (655), Expect = 4.220e-70
Identity = 186/520 (35.77%), Postives = 268/520 (51.54%), Query Frame = 3
Query:  504 FIQRISELIKDGQVNERPVDIEDYEELHQFPV-KTPKTVHDYEDDDAFARQRLQGGNCVVIEKCSAETRKKLKVLDS-----DPEYKASALKEKVDSLMKAG---KLLVVDHDLLKDMESSPLDGTV---ERFLVPSIALFEVVDDILPIRPIGIQQLSQKEA----TPIFTPDDG-YNWMIAKACFESADFIIHEVVSHLGFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPGAGVDRLQSNAIEDSWTMVLAEVVKRIAKDFSPPEDFAARGVTVEEFRGYYPYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMV--DIAQFKWLSEFYTTSNKRELIAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPGSVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYDVGQFKDDRVQGPLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALNFGYTTLLPDNIPQSTNI 2006
              QR + L++ G        +EDY +L  FPV + P   + +++D+ FA  R+ G N V+I++ S+        LDS     D +Y+     E  DSL  AG   +L ++D+ +L+      ++GT    +++L   +ALF V     P R + +  +   +      PIFTP    Y W+ AK   E AD   HE VSHL  TH+ ++  V+  +RQL  +H +  +L PH EGT  IN GAQ +LI P  GVD+L +  I++S  + +  V          P     RGV   +    YPYRD     W+AIH WV +Y+ +YY+++ A++ D +L+ +  E    D  +     E      K  LI   L  II+TAS  HAAVNFPQK  MS+ P+ P + Y+     K+E T  +YLN LPP+E A  Q+ +LTLLG I+Y KLGQY+ G F D RV+  L KFQ  +E+IED ++E+N                     Y  LLP  IPQS NI
Sbjct:  144 IFQRAATLLEKGHPTGHVSSLEDYHKL--FPVIEKPTIANIFDNDEVFAYLRVAGYNPVMIQRISS--------LDSRFPLTDAQYQEIMGNE--DSLALAGSEGRLYLLDYQILE----GAINGTFPKDQKYLFAPLALFAVPKGSDPNRKLQVVAIQCGQTPGNDNPIFTPKSAKYAWLFAKTVVEVADSNFHEAVSHLARTHLFVQPFVMVTHRQLLDSHHVSLLLRPHFEGTLAINNGAQAMLIAPKGGVDQLLAATIDNSRVLAVKGVETYGFNSAMLPNQLKLRGVDDPKLLPVYPYRDDALLIWQAIHQWVSDYISLYYSNDEAVQKDTQLQNWAREAQADDGGRVPDFGENGGIQTKAYLI-DALTLIIFTASAQHAAVNFPQKGIMSYAPAVPLAGYLPNSILKQEITAQDYLNLLPPLEQAQTQLNLLTLLGSIYYNKLGQYEQGYFSDPRVKPLLEKFQAKLEEIEDIIKERNFNRPE----------------YNYLLPSKIPQSINI 630          
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Match: A0A517Y0J9_9BACT (Linoleate 9/13-lipoxygenase n=1 Tax=Urbifossiella limnaea TaxID=2528023 RepID=A0A517Y0J9_9BACT)

HSP 1 Score: 254 bits (648), Expect = 1.160e-69
Identity = 175/519 (33.72%), Postives = 256/519 (49.33%), Query Frame = 3
Query:  474 AISDAGRARTFIQRISELIKDGQVNERPVDIEDYEELHQFPVKTPKTVHDYEDDDAFARQRLQGGNCVVIEKCSAETRKKLKVLDS-----DPEYKASALKEKVDSLMKAGKLLVVDHDLLKDMESSPLDGTVERFLVPSIALFEVVDDILPIRPIGIQQLSQKEA-TPIFTPDDGYNWMIAKACFESADFIIHEVVSHLGFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPGAGVDRLQSNAIEDSWTMVLAEVVKRIAKDFSPPEDFAARGVTVEEFRGYYPYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMVDIAQFKWLSEFYTTSNKREL--IAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPGSVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYDVGQFKDDRVQGPLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALNFGYTTLLPDNIPQSTNI 2006
            A+      R     + EL+   Q + R + I+DY +L    +  P    D+E D  FA  RL G N V+I +  A        LDS     D  ++ +   + + +    G+L +VD+  L  +E++   G  +++L   +ALF V      + P+ +Q   Q  A  PIFTPDDGYNW IAK   E AD   HE V+HLG+TH+ +E   VA +RQL   HP++ +LAPH EGT  IN  A+  LI P   V +L    I+ +  +    V  R+ K+  PPE F  RGV  +    Y  YRD    +W+AI  WV  YL  +Y S+  +  D+E+  ++ E+      K           R L  +  V A +I+TAS  HAAVNFPQ   MS+VP+ P + Y   PT K   T  +YL +LPP + A +Q+    +LGD  YT+LG Y    F + R+     +F   + DIE  + ++N            T ++   F    ++P  +PQS NI
Sbjct:   89 ALGTGTAVRAVAAVVGELVGLQQESRRLMSIDDYNDLFHI-IGLPPISKDFEKDSTFAELRLAGPNPVMIHRVDA--------LDSGFPVTDEHFQVALPGDTLAAAGAEGRLFLVDYQELDGIENAIAPGGQQKYLYAPLALFAVNKQTRQLTPVAVQCKQQPGADNPIFTPDDGYNWRIAKTIVEIADGNYHEAVTHLGWTHLTIEPFAVAAHRQLAPTHPLKVLLAPHFEGTLAINHMARTKLISPDGVVSKLLGGTIDGTLGLSARGVQSRLFKEQMPPETFRRRGVGSDALASY-SYRDDALLHWDAIREWVAGYLRCFYRSDAEVAADHEVAGWLSEV----SHKGGGRINGVEPARTLAELVDVTALVIFTASAQHAAVNFPQYDVMSYVPAMPLAGYAPAPTAKTGATEADYLAHLPPRDQAILQMNTGYMLGDTHYTRLGYYGDDYFGEPRLDELAGRFADKMLDIEKTIADRN------------TRRRPYPF----MMPSGVPQSINI 577          
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Match: Q1Z9C8_9GAMM (Probable lipoxygenase n=1 Tax=Photobacterium profundum 3TCK TaxID=314280 RepID=Q1Z9C8_9GAMM)

HSP 1 Score: 254 bits (648), Expect = 2.680e-69
Identity = 194/635 (30.55%), Postives = 307/635 (48.35%), Query Frame = 3
Query:  231 PSLPQNDGNADQAQRKSELAEKQKDYRWSTEGIPVGTPYLEGFPPAEELPDVAWVTQLVGAFLKIA---VGTIRGTVGVTEIVEAISDA---------GRARTFIQRISELIKD----------GQVNERPVD--IEDYEELHQFPVKTPKTVHDYEDDDAFARQRLQGGNCVVIEKCSAETRKKLKVLDSDPEYKASALKEKVDSLMKAGKLLVVDHDLLKDMESSPLDGTVERFLVPSIALFEVVDDILPIRPIGIQQLSQKEATPIF-------TPDDGYNWMIAKACFESADFIIHEVVSHLGFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPGAGVDRLQSNAIEDSWTMVLAEVVKRIAKDFSP---PEDFAARGVTVEEFRGYYPYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMVDIAQFKWLSEFYTTSNKRELIAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPGSVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYDVGQF------KDDRVQ---GPLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALNFGYTTLLPDNIPQSTNI 2006
            PSLPQND +  Q +R+ +L + Q++Y W  E   VG   +    P +  P + W   ++   + I    V  ++ T  + +I + +++A         G+   FI   +E++K            +V E   D  ++ Y++L Q  +  P     ++ +D FAR R+ G N ++I+  S+       V ++D + K   L + +   +   ++ ++D+  LK +  +P   T E+ +   IALF +  D   + P+ IQ    K+ + I           + + W  A    + AD   HE+  HLG TH+V+E   +A NR L ++HPI  +L PH EGT  IN  A   LI  G  ++ +    I+ +     A    R+  DF     P D A R V   +F   YPYRD  T  WEAIH W   Y  IYYT +  + +DYEL A+ + ++            T    RE ++ VL  II+T+S  HAAVNFPQ+  MSF P+  G+++ K PT+ +  T   +L  LPPM  +  Q+++L LLG ++Y +LG+Y    F      +DDR+    GPL +FQ ++ DIE            T   R++T ++     Y+ LLP  IP S NI
Sbjct:   10 PSLPQNDSHRQQEKRQEQLVKTQENYVWDLENPNVGPVPMAKDVPQDANPTLTWTIIVLKTLMPIVENLVSNVKDTAELVDIKKGVNEASDALGSLKLGQQLAFISNTTEMLKSLVEIYLRLVRAEVKEHREDEGLDAYKDLFQ-KIPLPAVAAAFQQNDCFARYRVAGQNPMLIKGVSSLA-DNFPVNETDYQ-KVMGLDDSLAEALAESRVFLLDYHELKVLVDNP--QTPEKQVFAPIALFALPKDRKSLIPVAIQSGQNKDDSTITYAVQNNDNSSEYWQWQAAMTMVQVADGNYHELFVHLGRTHLVIEAFTIATNRCLAESHPINVLLLPHFEGTLFINNSAAGSLIAAGGPIESIFGGKIKATQN---AAGTDRLGLDFYRYMLPNDLATRQVGNRDFLPDYPYRDDATLIWEAIHNWTTAYTSIYYTDDATVTEDYELAAWAESLMTEGAINGFKPITT----REQLSDVLTMIIFTSSAQHAAVNFPQRSLMSFAPAVTGAIWGKDPTNIQ--TEKAWLQNLPPMSQSLEQLSLLQLLGGVYYRQLGEYRSNNFPYLDWFEDDRITDQGGPLSQFQASLADIE-----------QTINIRNETRQE-----YSFLLPSKIPPSINI 614          
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Match: UPI0010087F4F (arachidonate 15-lipoxygenase n=1 Tax=Erythrobacter sp. HKB08 TaxID=2502843 RepID=UPI0010087F4F)

HSP 1 Score: 251 bits (642), Expect = 3.440e-68
Identity = 202/666 (30.33%), Postives = 311/666 (46.70%), Query Frame = 3
Query:  231 PSLPQNDGNADQAQRKSELAEKQKDYRWSTEGIPV--GTPYLEGFPPAEELPDVAWVTQLVGAFLKIA-----------------------------VGTIRGTV------------GVTEIVE-------------AISDAGRARTFIQRISEL--IKDGQVNERPVDIEDYEELHQFPVKTPKTVHDYEDDDAFARQRLQGGNCVVIEKCSAETRKKLKVLDSDPEYKASALKEKVDSLMKAGKLLVVDHDLLKDMESSPLDGTVERFLVPSIALFEVVDDILPIRPIGIQQLSQKEATPIFTP----DDGYNWMIAKACFESADFIIHEVVSHLGFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPGAGVDRLQSNAIEDSWTMVLAEVVKRIAKDFSP---PEDFAARGVTVEEFRGYYPYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMVDIAQFKWLSEFYTTSNKRELIAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPGSVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYDVGQF------KDDRVQG---PLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALNFGYTTLLPDNIPQSTNI 2006
            P+LPQND    QA RK+++A  Q +Y+W T+ +P   G P ++  P AE+ P + W  +LV   L++A                             +G I   V            G   +VE             AI+D     T +Q I E+       + ++   +E+Y  L +  +  P+  + ++DD  FA  R+ G N V+IE   A      +   +  +Y A    + +++ +  G+L   D D LK +E    +G V+++L   +ALF V      + P+ I       A+P+ TP    +  + W +AK   + AD   HE+ +HL  TH+V+E   VA +R L   HP+ A+L  H EGT  IN  A   LI  G  +D + +  I  S     A V  R+  DF+    P D A RGV        YPYRD G   W AI +WV++YL +YY +++ +  D EL A+   +    Q K     +T     E + ++    I+T S  HA+VNFPQK  M F P+  G+++ + P  +   T  E++  +PP  +A  Q+ +L LLG ++Y  LG Y    F      +D+R+ G   PL +FQQ++E++E  + ++NAE     R R           YT LLP  IP STNI
Sbjct:    9 PTLPQNDDAGQQAARKAQIAASQAEYQW-TDAVPALEGVPVVKTLPKAED-PTLEWWLKLVRIVLELAKNQVEVEADLIEQKLSSLDPALLAADRLVIGAIEKDVVGLELKLAINPLGKHSLVEEAKEAVELVSAEVAIADLKNHATKLQGIIEMRGATKEALGKQDRSLENYRGLFKS-IACPEIAYTFQDDLEFANLRVAGPNSVLIEAVDAVP---ARCAVTAEQYAAVVPGDTLEAAVAQGRLFQCDFDDLKIIEPGEWEG-VDKYLTCPVALFAVPPGASSLVPVAINCDPSDPASPVMTPSLSDEKQWGWEMAKLVVQVADGNYHELFAHLARTHLVIEAIAVATHRHLSDQHPVWALLVRHYEGTMFINEAAATSLITKGGPIDHIFAGTIASSQQ---AAVEARLTFDFTDGMLPNDLARRGVDANSALANYPYRDDGLLVWSAIESWVRDYLAVYYDADSDVTGDTELSAWAAAIAGHGQLKG----FTAPQTIEDLVQICTMTIFTGSAQHASVNFPQKAIMEFAPAVTGALWQQAPDTQDGATKSEWIEMMPPQALALEQLKVLFLLGSLYYRPLGTYLSPNFPYPQWFRDERIVGEGGPLDRFQQSLEEVEAQIVQRNAE-----RRRP----------YTFLLPSLIPSSTNI 645          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2886.7868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBX4_ECTSI9.290e-27461.77Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5K920_9PHAE1.200e-25660.23Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KD72_9PHAE1.190e-25560.17Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
A0A835YNA1_9STRA3.930e-8232.57Lipoxygenase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A355CN11_9CYAN1.350e-7233.81Lipoxygenase n=2 Tax=unclassified Microcoleaceae T... [more]
UPI001C40356A1.170e-7031.54hypothetical protein n=1 Tax=Anthocerotibacter pan... [more]
A0A3B8Y9X0_9CYAN4.220e-7035.77Lipoxygenase n=1 Tax=Cyanothece sp. UBA12306 TaxID... [more]
A0A517Y0J9_9BACT1.160e-6933.72Linoleate 9/13-lipoxygenase n=1 Tax=Urbifossiella ... [more]
Q1Z9C8_9GAMM2.680e-6930.55Probable lipoxygenase n=1 Tax=Photobacterium profu... [more]
UPI0010087F4F3.440e-6830.33arachidonate 15-lipoxygenase n=1 Tax=Erythrobacter... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2886contigH-paniculata_contig2886:3474..18587 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score795.4
Seed ortholog evalue2e-227
Seed eggNOG ortholog2880.D8LBX4
KEGG rclassRC00561,RC00839,RC02139
KEGG koko:K00461
KEGG ReactionR01595,R03058,R08527
KEGG Pathwayko00590,ko01100,ko04664,ko04726,ko04913,ko05145,map00590,map01100,map04664,map04726,map04913,map05145
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
EggNOG OGs28IFU@1,2QQSP@2759
EC1.13.11.34
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons16
Model size3256
Cds size2004
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2886.7868.1prot_H-paniculata_contig2886.7868.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2886 4721..18582 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929878.804325-UTR-H-paniculata_contig2886:3473..47201622929878.804325-UTR-H-paniculata_contig2886:3473..4720Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2886 3474..4720 -
1691481051.7509499-UTR-H-paniculata_contig2886:3473..47201691481051.7509499-UTR-H-paniculata_contig2886:3473..4720Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2886 3474..4720 -
1622929879.2574246-UTR-H-paniculata_contig2886:18582..185871622929879.2574246-UTR-H-paniculata_contig2886:18582..18587Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2886 18583..18587 -
1691481051.9323566-UTR-H-paniculata_contig2886:18582..185871691481051.9323566-UTR-H-paniculata_contig2886:18582..18587Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2886 18583..18587 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929878.8210475-CDS-H-paniculata_contig2886:4720..48351622929878.8210475-CDS-H-paniculata_contig2886:4720..4835Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 4721..4835 -
1691481051.7635038-CDS-H-paniculata_contig2886:4720..48351691481051.7635038-CDS-H-paniculata_contig2886:4720..4835Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 4721..4835 -
1622929878.838458-CDS-H-paniculata_contig2886:5809..59141622929878.838458-CDS-H-paniculata_contig2886:5809..5914Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 5810..5914 -
1691481051.774406-CDS-H-paniculata_contig2886:5809..59141691481051.774406-CDS-H-paniculata_contig2886:5809..5914Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 5810..5914 -
1622929878.8628595-CDS-H-paniculata_contig2886:6995..70991622929878.8628595-CDS-H-paniculata_contig2886:6995..7099Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 6996..7099 -
1691481051.7848577-CDS-H-paniculata_contig2886:6995..70991691481051.7848577-CDS-H-paniculata_contig2886:6995..7099Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 6996..7099 -
1622929878.8785594-CDS-H-paniculata_contig2886:8356..85721622929878.8785594-CDS-H-paniculata_contig2886:8356..8572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 8357..8572 -
1691481051.7947838-CDS-H-paniculata_contig2886:8356..85721691481051.7947838-CDS-H-paniculata_contig2886:8356..8572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 8357..8572 -
1622929878.8994892-CDS-H-paniculata_contig2886:9199..92471622929878.8994892-CDS-H-paniculata_contig2886:9199..9247Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 9200..9247 -
1691481051.8045137-CDS-H-paniculata_contig2886:9199..92471691481051.8045137-CDS-H-paniculata_contig2886:9199..9247Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 9200..9247 -
1622929878.9220781-CDS-H-paniculata_contig2886:9576..98101622929878.9220781-CDS-H-paniculata_contig2886:9576..9810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 9577..9810 -
1691481051.8151278-CDS-H-paniculata_contig2886:9576..98101691481051.8151278-CDS-H-paniculata_contig2886:9576..9810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 9577..9810 -
1622929878.934602-CDS-H-paniculata_contig2886:11199..113561622929878.934602-CDS-H-paniculata_contig2886:11199..11356Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 11200..11356 -
1691481051.8262727-CDS-H-paniculata_contig2886:11199..113561691481051.8262727-CDS-H-paniculata_contig2886:11199..11356Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 11200..11356 -
1622929878.9502623-CDS-H-paniculata_contig2886:12232..123271622929878.9502623-CDS-H-paniculata_contig2886:12232..12327Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 12233..12327 -
1691481051.8368177-CDS-H-paniculata_contig2886:12232..123271691481051.8368177-CDS-H-paniculata_contig2886:12232..12327Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 12233..12327 -
1622929878.9695244-CDS-H-paniculata_contig2886:12637..127481622929878.9695244-CDS-H-paniculata_contig2886:12637..12748Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 12638..12748 -
1691481051.846677-CDS-H-paniculata_contig2886:12637..127481691481051.846677-CDS-H-paniculata_contig2886:12637..12748Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 12638..12748 -
1622929879.0839944-CDS-H-paniculata_contig2886:13249..133211622929879.0839944-CDS-H-paniculata_contig2886:13249..13321Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 13250..13321 -
1691481051.8570533-CDS-H-paniculata_contig2886:13249..133211691481051.8570533-CDS-H-paniculata_contig2886:13249..13321Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 13250..13321 -
1622929879.1072674-CDS-H-paniculata_contig2886:13706..137951622929879.1072674-CDS-H-paniculata_contig2886:13706..13795Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 13707..13795 -
1691481051.8662796-CDS-H-paniculata_contig2886:13706..137951691481051.8662796-CDS-H-paniculata_contig2886:13706..13795Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 13707..13795 -
1622929879.1263354-CDS-H-paniculata_contig2886:14048..141571622929879.1263354-CDS-H-paniculata_contig2886:14048..14157Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 14049..14157 -
1691481051.88058-CDS-H-paniculata_contig2886:14048..141571691481051.88058-CDS-H-paniculata_contig2886:14048..14157Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 14049..14157 -
1622929879.1920302-CDS-H-paniculata_contig2886:14437..145491622929879.1920302-CDS-H-paniculata_contig2886:14437..14549Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 14438..14549 -
1691481051.8939302-CDS-H-paniculata_contig2886:14437..145491691481051.8939302-CDS-H-paniculata_contig2886:14437..14549Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 14438..14549 -
1622929879.2084572-CDS-H-paniculata_contig2886:15981..161001622929879.2084572-CDS-H-paniculata_contig2886:15981..16100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 15982..16100 -
1691481051.90441-CDS-H-paniculata_contig2886:15981..161001691481051.90441-CDS-H-paniculata_contig2886:15981..16100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 15982..16100 -
1622929879.2249036-CDS-H-paniculata_contig2886:17284..173941622929879.2249036-CDS-H-paniculata_contig2886:17284..17394Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 17285..17394 -
1691481051.9147916-CDS-H-paniculata_contig2886:17284..173941691481051.9147916-CDS-H-paniculata_contig2886:17284..17394Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 17285..17394 -
1622929879.24234-CDS-H-paniculata_contig2886:18374..185821622929879.24234-CDS-H-paniculata_contig2886:18374..18582Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 18375..18582 -
1691481051.9247985-CDS-H-paniculata_contig2886:18374..185821691481051.9247985-CDS-H-paniculata_contig2886:18374..18582Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2886 18375..18582 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2886.7868.1

>prot_H-paniculata_contig2886.7868.1 ID=prot_H-paniculata_contig2886.7868.1|Name=mRNA_H-paniculata_contig2886.7868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=668bp
MARSKAIALIATLVVSSGYAFVPPTLRPAPPRGAPTWGGSCSSRPGVSPL
ELSPLGSFSPLDSIANLFRGPNEDIPSLPQNDGNADQAQRKSELAEKQKD
YRWSTEGIPVGTPYLEGFPPAEELPDVAWVTQLVGAFLKIAVGTIRGTVG
VTEIVEAISDAGRARTFIQRISELIKDGQVNERPVDIEDYEELHQFPVKT
PKTVHDYEDDDAFARQRLQGGNCVVIEKCSAETRKKLKVLDSDPEYKASA
LKEKVDSLMKAGKLLVVDHDLLKDMESSPLDGTVERFLVPSIALFEVVDD
ILPIRPIGIQQLSQKEATPIFTPDDGYNWMIAKACFESADFIIHEVVSHL
GFTHVVLEGPVVAMNRQLPKAHPIRAILAPHLEGTALINWGAQNLLIVPG
AGVDRLQSNAIEDSWTMVLAEVVKRIAKDFSPPEDFAARGVTVEEFRGYY
PYRDVGTKYWEAIHTWVKEYLDIYYTSETAMEDDYELKAFVDEMVDIAQF
KWLSEFYTTSNKRELIAKVLASIIYTASTFHAAVNFPQKPHMSFVPSTPG
SVYVKPPTDKKERTFDEYLNYLPPMEIATVQVTILTLLGDIFYTKLGQYD
VGQFKDDRVQGPLRKFQQTIEDIEDDLEEKNAELISTWRSRDKTAKKALN
FGYTTLLPDNIPQSTNI*
back to top

mRNA from alignment at H-paniculata_contig2886:3474..18587-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2886.7868.1 ID=mRNA_H-paniculata_contig2886.7868.1|Name=mRNA_H-paniculata_contig2886.7868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15114bp|location=Sequence derived from alignment at H-paniculata_contig2886:3474..18587- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAAAATGGCACGATCTAAGGCCATCGCGCTGATTGCTACACTAGTGGTA AGCTCTGGCTACGCGTTCGTGCCGCCCACACTGCGTCCCGCACCTCCGAG GGGAGCGCCTACGTGGGGTGGTTCTTGCAGTAGCCGTCCAGGTGTTTCTC CTCTGGAATTGTCGCCGCTGGGCTCTTTCTCACCTCTGGATTCTATCGCC AACCTTTTCCGCGGTGAGTTTTACTCGTTGAACCCCTTCAGGGGCCAATA GCCCCTTCCATCAGCTGTGCACGGGTGTTGTTCATTATTTGGTCGTTACA AGTCGCCCCCGGAAGTTTGTCCGTCATCACGTTACACTAAATCCAAGAGC ATAGAGCATCAACCGGGAAAAAAAACGCCGCCCTTTTGGACCTGAGATAC GCCATGTGTAGAGCTGGTTAGGCGTTTTGCTTCCTTTGTGTCATAAGTAC AGTCGGTTGTGTTCGGCAGATCATACTTTAAGCATGTCCAGATCTAAGGC TGTTCGGAGACTGTGGTTGGTATCGTTGGAAAGCTAAAGTCTGATATGGT CATATGAGCTATTCCAAAGTGCATTCCGATTTGTGTATTAGAATTACTGA CCACTCAAGGTTGGGCTGATTTCAACCTTATTCCGCGTTTTTTTTTTCGA TTTTCACATTTTTCCTTTGGTAAAATACGAAAGGGGGCAAAAATACACCC TTTTTTCGGCCGGCATCGTTTTTCTTGGCCGTCCGCGATTCCGATGGATT TAGCTATTTCCCCCCGAATTTCTGGGGATCAATCCCCAAAATATACCGAT TCTAATTTGAAGGAAGAAAAATGGAGAAGGATACGTGCCTTTATAAACTC AGCCGACTTCACTTACGGCACAGACGAAGTACATAAGACATACTCGTCAC ATTCACGACTACTTTTTCCCGATCATCGTACATTTTGGACGTTTTGGAGG CTGCTTTTTCCCGATCATCTAACATCACACTGTTACGTCGTTTTGGGTTA TTCTCAATCTCCCGATTACCCCTCATCGACCACACAAAACGGCACGCCAT CAAACCACGGCAATTTACGCCAGTCAACCACCATGCAATACCCCACTAAT TAAAAATAGAGTTTTGTGATCGCAGGCAAACAGCCACATAATATGACGGG ACACTTACGTGCTCCGACCTTCTTTTGGCGTTTGGTTGGACAGGACCGAA TGAAGACATACCGTCTCTCCCACAGAATGACGGTAATGCTGACCAAGCCC AGCGCAAGAGTGAACTCGCTGAGAAGCAGAAGGACTACCGTTGGAGCACC GAGGTAAAACAGAAAATATACTGGAGGATGTATATGAGAGCGGACGCGTT CAATCTATTGGTATGTAATAAGAGTAGCACTCTATTTAGTTTGCACTTTT TGTCTTTTGACCTTCACGGTATAAGCTCGGCATGAAACAGCCCAACAGCC AACAGCAGATTTCGAAGCGGTACAGCAACAATTTAGCTGAGGAACAATAT ACTCAGATTAATGTATAGAAGGGGGAGAAGAAATATTTGTGGGGACTATT TTTTCGATTTTTGAATCATCACGACAAAGGGATCTAAATTATAGAGATGG GTGGAAACCGGAAAAGGCGACTATACCCGAGAATGTATATCCAATGACTA AGCACAGAATAACTTAGTGGAGTCAGCTGTGTACTGTTACTATCGACGAA GATTCTTTGCGCAGGCTCGGCAAATCAAGCGGGATAATGTTCTAGGCATG AATCTGGTGGTATCTACAATCTAATCGTATTAATAGTGTACCATCAGTCG GTCATATGATCACCATTAACTCCGTTCGATGCTCTTGAAAATCTGGACTG GTTGACTCCCTATATTACTTATCTTGTGTTAAATTGTGTTTGTGGGGCTC CCCGTACATACAACAAGAACTGGTCACATGTAAAAAATTGGTCTGATCGG CTATTGTCTGTTCCTTTTTGGTGGCCATAACATCAAATTTTATCATGTAT ATCGGGTGAATCTCGTTAGATATGGAGTAGAGAACCTCTTTCCACATTTT CCTGTATAGCATCACGACGAACAATACTAGAGTACCGGTATGTCTCTATA AACACATGTCGAATACTACTGTTCTAAGAAAATGACACAGCAGCACCCCC ATCACATTTGGAGTGTTCGTAGTGGTAAGCGGAGGCGTGCATGAAGTATA TACACACCATTTCGAGACCATGTTTTGTATGGTGCCCCTCTCACTCTTTG GTAACATAAACCCGGCATTTGCTGCGTCCTGGAAGCACTGTTGGGATGCG AGGTGAATGACCTCGAACACTACAATGTTGCATTGCGGTCATTCCCCGTC CCCGCGTTACGTGAGGCTAGTTTGACATCAGTTTGATCTCTGGATATGCG GTAATTGTATAAAGAAATGCACGCGCTGCACGCGTCCGGAAATTCACTGT CTTTCCTGGGTATTCCCCTCCCTCCCATTTTTTGCAGGGTATCCCCGTAG GCACGCCGTACCTCGAGGGCTTCCCCCCTGCGGAAGAACTGCCCGACGTA GCCTGGGTCACGCAACTCGTAGGAGCGTTCCTCAAGATTGCGGTGGGCAC CATCAGGTAAGCGCTTTACTTCCGCCACTACTAATTGGAGAACTCTTGGA GCCACGACTACGACCATGCAATACGTAAATTTTCCTCGAACCCATTTAGT CAAAAGTCACAACCCGCACTCCACAGTTACCTGCACTGGCATACAGGCAC GCTGTCCATGCAAGTTCTTTTTCAGAAGTTGTATCACGTACAGTGAGGGG AAATTGCTTCGAAACTACTAACTACCTTGGAAACGTAACGTGTGGGGGCA AGTCATTTGTGTCGCACTATTATGAAGAAAACATGGAAAACCAGGTGTAG TGATGGGGTGCTTTGGAGCGTTGAAGATACATTTTGTTTGTTGTTTTGTG CGAAGCTGGGTTTGGGGTCGTTTTGTGGCCGGAATATCGGAAGAAGGATC ATAATTGTTGTTTTGGAAGTGTATTGGCTTCACATGAGTGTGACGCTCCC GTGCAAACATATCATGGCTACCGTTGTGAACCCTGTAGTATTCACACCTA GCCTGAGGCTAAATGCTCGGCAGGCCAAACGTTTTTGGTTATGCAGGGAA CACGGCATCTTTAGATGTGAATTGTGGAATGAGTGCCACTCCGGTGTTGG GTGAAATTTGGTGGGCGACGTGACAAGAAGCAGTTCAATTTTGATGCACT CAAAAAAATCTGATTGGTAATAGGGTTGCGCGGGTATGGGTCAGGACAAC GTATCACAGGCTGTTGTGGCACGCAGGTGTGGTAACCCATTGAAGCACAC ACAGGTTGTCAAAGTTTAGGCGAAATTTGCGATTCACACGTTCACGTGGT GACCACGCTTGCAATGCGCTTAAATATGTTAATAGCGAATATGGGACGAC GTTGACGTTACTGTTCTCGGTATTTTGTTTTTATTTTAGTCATATTATGT ATGTTACTTATAAACGCCTATCAAACAGGTGCCATTGAGAAAAGCAGTAT TCTAAAAGTACCACAATAAGGTACACTCATTGGGAACAATATCTCCGCGC TTTTTTTCAAGTCCCGTTGGCCATCGTGTTACCCCCGAATACCGAACACC GCTTGTTCCCTACTTAGGTACTACTATTAGGTACCTAAGTAGGTAACAAG CGGTAATCGGTATTCGTTATTTCGCGAGGAACACGATGGCCAACAGGACT TTGAAAAAACGCCCAGATATTGCTCCCAAAGAGTGTACCTTTATTGTGGT ACTTTTAGAATACTGCCTTCCTCAATGGTATCCGTTTGATACGCGGTTTT AAGAAGAAAAAAACACACTGAGAACACCCCTGGAATTTTCCGCCTCAACG TACCTGCCCTCTCGATGCCCATAGCAGTTTCAGACTTGTTCTGTCCTTCC CATTGCACGCCCTCACTCTACCTTTCTGTCCTTCCCATTGCACGCCCTCA CTCTACCTTTACTCGCCTCTCCATCGTCGTGTCTGCAGAGGGACGGTGGG TGTCACTGAAATTGTTGAGGCGATCTCAGATGCCGGGAGGGCCCGGACAT TCATCCAACGTATCTCGGAGTTGATCAAGGATGGCCAGGTTAACGAGAGG GTAAGTAGGGTGACGGTGGCTGCGTATGTATAGGTCACTGTAGGCCCAAG CGATTCACTTGGTTGACCGGTCTCGTAGACCTCGTATATTAGTGGTGGGT TACCGAGGGTGTTGGCGTTAGGGGTACCCCGATTTATGGCGGGCTTAAGG TGACACGCCAAGAATTCCCCGACTTCAAACCGAAAATGGCCTTGTTGAAA TCACGTTCAAGTCGTTGGCAACACTGATGCGTGCATCCCCTTCTAACGTT TCTTCGCTGCTTTGAATGGTGATTTGACAGCCGGTGGACATCGAAGACTA CGAAGAGTTGCACCAGTTTCCCGTGAAGACCCCCAAGACTGTGCATGACT ATGAAGATGATGATGCCTTTGCCCGTCAACGGCTCCAAGGTACAGTAAAC TTGGATAAAAAAATGTTTGTAAAAAGGTATGCAGGTGGAATTTTCTACAA GAGGATATCATTAGGGTGTTCGCATATCACGGATTTCACCAAATTAAATC AAATCTATCCTACATTGGCGCGGTTGGTTTTTATATGCTCTTTTAATAAT CTGGAGAACAAGCATCGGTCCAGGCTCAGTTCGTGATGCTCTACACAGAT TAAATGTTTGCCTTCTCTTGGTCCATTTGTGTGTGGTCACAGGTGGGAAC TGCGTGGTTATCGAGAAGTGCTCCGCCGAAACGCGCAAGAAGCTGAAGGT CCTGGACTCTGACCCTGAGTACAAGGCGAGCGTTTTTATTTTGTCTGACC TAAATCCTACTGCCGAATAGGCCCATGTAAATGTGTGTTACTAATGTAAA ATCGAATACAACGGGGTAGATTAAACAATACTTGGGAGGAGGGCTACTTT GAAATTATGGTTACTGTATCATGATTTTTCACATGTTAACGAGATACATG TGTTTTTTTTCTTTTCGTGTCCAGTCTAGATTTCCTACGTTTCATAACAA GTTAAGAGGAAACGACAATACTATGGATAAGTTTAGTTGTTGCGCATTTA ATATATATATTGAAATATTGTAAGGAGGGGTGATGCAGTTTTTTTTTTCG AAAAGTTTGTGTCAGGTGTTCATCCCCACCAGCACATCCGCTTTCGTTTC ATTGACTTTTGTCCAGGCGTTGAAGGAGAAGGTGGATTCTCTCATGAAGG CCGGGAAGCTGCTGGTTGTAGACCACGATTTGCTCAAGGTACTGAAACAA TTGTTGTGTTCAGTCTTTTTTTCTGTCCTGTTCGTTAACAATTACGCTAT GTTTCGCGTGCGTCCTATCAAGTCGGTGTGCTTAAGTTTGAAAAAAAATA GCTAATTCTCGCGTCTTGTTTTTGGATAAATTGAGAAGACATACCGTGGG AACTCTAGCAAACGTTATCTCTCAAGAAACGCGTCCTATTCAACCCATGC CCAAACGTTGCTGCGAAACGGTGGCCTACAGATATCCCCGTTTTTTCTTT TCCGGGGCTCATGTCATGTGCTTGTATGTATCATACCGTTTCTGTTTTCT CGAAGAGCGTCTTTTTTGTGACCCTGTTGGAAATTCCAGCATGTTTTTCC GTGGATCATCTTTTTTTGTGTGGTTGTTTTGCGTGACATACTCCTCAAGT CACGAGGAATCAATCGCGCCTGCTTCTCTTCTCCAAACTCGGTTTTTCTT ATCGACGGTTCCTGTTTATCTCTTCTTGTCTTGTTTCAGGACATGGAATC TTCTCCCCTCGACGGAACCGTGGAGCGCTTCCTTGTCCCAAGCATCGCCC TGTTCGAGGTGGTGGACGACATTCTGCCAATCAGGCCCATCGGTATTCAG GTATGCACTGGCTCAAGATGGTAGCAAGTCTGAAAGCTCGTGAACTTTCT GGGAGTTTAACGGGCAATTTTAGAGGCAATGTATATCACACATGGTCGAA AACGAGTTTTTACGACTGACCTGCAGAACCTGCATTTTTTCTGTTTGTTA TGAATGAGCCGGGTATGGCATGCGTGTGTTGTCGTTTTGCTGAGTTAACA GCAGGAATCGCTGCCTCTGTCTGAGAAGCAAAAAGTACCCCGTTTTTTAA TTGTATTAATTGAGACCATTCCGATGACCCCATGCCGGTTGTTTTGGGTA ATAACACGAGCAGCTGAGCCAAAAGGAGGCTACCCCTATCTTCACTCCGG ATGATGGCTACAACTGGATGATCGCCAAGGCTTGTTTCGAATCTGCCGAC TTCATGTGAGTGAATCGATTTAACCTGTTGTTTTTGTGCCAGGTGTACGT GATGCTTGGAGTGTATCCGACGCTGATCGATTGGCGTCTCTTGGACATGT AGTAGTACACATGCTTTTCATTCTCAAAGTTGGAGAAACCGACAAACGCA GACATGCTTTTTCTTGGAGTGTCGTTTTCCCAAAATATCGTGCATGGTCA ATGCACTGCAGTAGTATAGATATTGCATGATTTTCCCCCCAGACATCATA TTGAGGTGTAGGAAGCACATACTAAATGTTTACTCTCAATAAACTGCTGA CTAGTGCTTAGTCACCGACAATTGTAATATATTGAGGCGTTTTCGGGATT GATGTGTGAAAAGCACGCTCCTGACGTTCCCAAACCTGGGTCCATACTCA TGAAGTGGCGTATCCGGTTAATGGAACAGTTTTCTGGCCGTTTTCGAATA CTGGAAAATGAGTTCATATAAAAACAGAATAAAGAGTTCGTGCTCCGCAC TATATCCCAATACTAGAACCAATCGCCCGACCGGGCTTATCCGATCTCTC ATGAGGGCGTCGCGTATTAATAGAGATGAAATCATCTAGCGTGACGGTTT ATTCATTATTTGGACTTGACGTTCCTCCTAGTAGTGGTACATGTCTTCTT AATCCCTAAATGCATCATCTGGCGATCATCTGGTCATCAAACATGGTTGG AGGTTGTGTATGTATAATTGTATGTTGCTCAATTTTGCATATATACATAT ATATATATACATACATACACCAGGTATCCTCTAGCAGAGGTCCAAAATAA GTCGTACGCTGCTGTGAAGGTTAAATTCTAACAACGCAAACCGTCCGTGT TTGTTTCTGGCTTGTTACGTTGCTTATACAGTATCCACGAGGTGGTGTCC CATCTAGGCTTCACTCATGTTGTTCTTGAGGGACCCGTGGTGGCCATGAA CAGACAACTGCCCAAGGCCCACCCCATCCGCGCCATCCTCGCGCCCCACC TCGAGGGCACGGCCTTGATCAACTGGGGCGCTCAGAATGTAAGTCCTGTG TTTCTTGAGGCTTTTTGCTTCATGGGAGGGTTGATGGTAGTGGGGGCGGG AGCGGGGGTGGGGATGATGATGGTGATAATGTGTTCTCATTAGGGTATAA CAGGTTGTTTTCTCACGCGACCGAGGTGCGTGACTCTGTAGTACAGCGAA ATTGTATAGTTGTCCAGTCATGGTTGACAGTACGCACTTTCTGCCTCCGT TTTGTTTTGTTCTCCTGATCATGCCATCCCTCTCTCTCCACATTCGTCCC TGAGCTATCAAACTTGAGCGCGGGTCGGAGGTGGTGAACTAGCGCGTTAC ACAAAAACACCCGCTGTGATGAACACTGTTCGTCTTTCAAGACTGCGCGG TTAATGTTCAAGGATCGTTCAGTTCTGACAAAGGCTTTAGCCCACCTTTT CCCTCTCTTCTCTTTTTCTCCCTTTTTAAACATCCCGAGATTATGTTGGA TAAAATAAAAAAATCGTGAGAAGTGTTGAACACTGTTAGAGGTGTGTCTA GCCCCCTTATCGACCACAAAATCGGCCCAAGGATCACCAAGAAATAACAC ACTACTTCTTTAAAAGATGTTCTTCCCCTGACAGTTCACGCCACAGATAT TTCTCAAGTACTTGTTTCTAGTACAAGGTTTCCACGCACGTTTGTCACCA AAACTCTCGAAACAGGTTCTGAATTGGCTAGTGAAACTGAAGACACCCTT GCGCATCTGCATAATATACAAATTTGTCTTCCGTAGCTGTAATCCGCGTT ATGACAGTCTAGAACGCCCCAATAAATAGTGCTTCTTTGGCTATTTTTCC CCTGAAGATGTTTCTTTCGTTTTTAAGGCATATAACACTGCTGCTACAAA GGTATCTGTCGTGTGCGTGCACACAAAGCAAAAACCCGCACCCCAATCGA CGCCCTTGCTGAGGAGTAATCTGGTATAGTAGGTAGTCCATCACCACAAG TAAGCACCCCAAACTACTCCACGTTACAGAGTAGAAAAGAGAGCCCTCCT CTCATACCAGAATAGTATTTGACGGTGTGGCTCTTCATACTCTAGAATCG GTAGGGTCGAAAAATTATAAATCGTGTAACGACCATGAGACACAAAAACC TCACTATAGAGGAGCTAGGTGCACCCCTAATTGTGAAGGCAAGTATAGGA CGTACCCATTTCTGGAACTTCAAATATCCGAGAAAAAAGGACAGGGGAAA AGGGAAGCAAGGGGGGAGACTCTGGTTAGTAGCGGCTCTGACATCGAAAG CACGCAAGATATCAGTATCGCCCCCTATCCTACCCACCCACCCAACCACC CCGCATTGCGTCCTTTGTCCCTCGCTCCATTGTTAATGTGCGTATTTTTA TCTTTTTACATTGACGCTGTGGTGCAGCTGCTGATTGTGCCCGGCGCGGG CGTAGACCGCCTGCAGTCTAATGCCATCGAAGACTCATGGACCATGGTGC TGGCAGAGGTGGTGAAGCGTATCGCCAAAGACTTTTCCCCCCCGGAAGAC TTCGCCGCCCGCGGTGTGACGGTCGAGGAGTTCCGCGGCTACTACCCCTA CCGTGACGTTGGCACCAAGTACTGGGAGGCCATCCACACCTGGGTCAAGG AGTACCTCGACGTGAGTGGCGTTTTGCGCTGACGTTTTGTCAAGGGGGGA GGGGGGGAAATCGTTTGTCACACTGCTATTATTACTATACATCGTCAAAC ACAACAAGAGCTAGTGATTGTTCAGATTGTGTTTGATAAATTACACGGTG CTGGGCTGGTACTATTATGGGTGTATTACGGCGGTGAATTTAATCGAAAC CGTCACGTTGCGAGTTTTTTCTTCACTTAAGCGTCTACAATATGGAGGCT TGCGTTGTTTGCAAGGATCAATGACGTTTTTGTCTGACTGTCGTGTTCGT TCGGTTCGTTCGTTTGTTTCATGGTTCTATCGTTCCCCAGATCTACTACA CAAGCGAGACCGCCATGGAGGATGATTACGAGCTCAAGGTGAGGAGAGAA AAAAGATTGCAGTAGACAACGACTGGGTTATAACAAAATGCTGTGACTGC AGGGTTTTTGCGAGATGGAAGCAGTGGGGCGGCGGGGGGGATCCGCTACG CTCGTCGCATGCTCTTGAGTTTGGTGGACCCAGGTCCCACGACACGACAT ACACGCACACACGGCACATCATGAATACGCAGCATTCAATGACAAGGTTA CAAGTTCTATTTGTGGTTTGTACTTCGTGTTCACCGTATCAATGCAATCC ACTATACTGCCTCCCTTTCGGCAGTGTCCGCTTGTCGAAGCCCTCCCAAA CGACAATCTCGAGTCACGGGGCAAGGATAGTACAGCCGTGAGCACCGCCT TAAAAAAACGTTCGAAGGAAATCTGTGTTGGTCGGGATTCGAATTCACGA TTAACTTTTGTACAGAAAGCATCTCGCCGCTGAATGTGTTGCTCTGTGGT GAGCTGCTTTCTGCACAGTGTTATTCCAATGTCTTGCAAACAGCCTAGCT TGACAACCCCAATGGGGACAGGTACGATGACATAGCGGAATGGGTCAGGA GTGCATCAATACACTCGTACCTTGCGCATTGCTCCCCCCCACGCGCCCCT CGCGCCCCCTGGCAGGCCTTTGTGGACGAGATGGTGGACATCGCTCAATT CAAATGGCTATCCGAGTTCTACACCACTTCCAACAAGCGCGAGCTAATCG CCAAAGTTCTGGCCAGCATCATCTACACGGCGAGCACCTTCCACGCGGCC GTGAACTTCCCTCAAAAGCCTCATATGTCGTTCGTCCCCTCTACGCCCGG GTCGGTGTACGTGAAGCCGCCAACGGATAAGGTATGTCTATACCGTGCGC GCCCTATTGTAGGCAGGAGGAGGTTGTGTATTCGATTAATCTCTGCAATA ATTACAGTAGTAGCGTGCCATTAATATGAGATCTGTACGGTAGGAACTTA TCGTATATAGGAAAGATGAAGTATATATCTTAAGTATTCAGCTATCAACC ATGGATACAAAGTAAGGACCATTGATGCGATCCTCTAGTGGCGTCGCTAT TTAGCCGTTCAGGGGTCATACAAACATGACAAAAACCAATACCAATTGGT TTTACGTCCGATGATGCTGGTACGATATTTTCTAGGCGTTGTAATGGCAT TTGTGCCGGGTCGAGCGGGGCCGACTAGGAAAATAGCTTCATTTTCAATT TGACGGTATCTAGTCGTTCACGACGTGTAAACACCTTGGGTGACGTGATT TCTTTTTTGCTTGAACACTATTTTCTCGTCTAGAAGTAGTATCGTGTTAC ACTGTCACAAGGCCGGTCTTGTATCTACAGTATCGGCAGGTATCGACGCC ATCTTTCCGATGATGCCAAGTTCGGGGTTAAAAGCAACGTAGTTGATGAA GCATGTGGAGAATAGGGAGCCGTGTTGGTCGATGATCGCCAAGAATATCA GGGTGTAGGAGATTGTATTTTGTTTGTGTTTTGGGCGAGAGTCGGCGAGG GCTAAATAAAAATATGCTTCAAAGTGATGGTTCAATGGTGAAATCGATAA TAGGTACAGCGTATTGATTCACGGAGGATTACACGTTGGGGTGTCGTGTG TGCTGTTTGCGATTATTTTTTTCTCGTGCCTTTTTTTTCGCATATTTGCT CATCGATATGTCCGGAGTCTAGGTGGGCGGTGCCGGGAGATAAATGAAGT ACATGGTGTGGCTCGTATGCTAGACTGCTTCTGTATACAGTGGTGGGACG GACTGGAACGCCGAGAAATCACGTGAAGAAATATGCCATAACTGTTGCGG AATGATGAACTTATCATTGTATTGCTGACGGTATCCGGACATTGAGTGTA TGATCAGTGCTATTCTATTCCTATTTCTGTACAGAGTTGGCGTGTTTTTA CCTCTTTCGTTCTCCTAATCTTTGACACAAGCCCTCGTTATGACCAGTTT GGGCATTCAGCTAAAGGGTAGAGATGAAAACAATTGGTCCTTTCGCAGAA GTGGTATTCTGTTTATGCTTCCATGATTCATGACCTTCGCAACGTCGTTA TGTCTTATGTTGACGTTCGTGCCTGTTGGTTTATGCAGAAAGAGAGGACG TTCGACGAATACTTGAACTACCTGCCTCCCATGGAAATAGCCACCGTACA GGTTACTATCCTCACGCTTCTCGGAGACATCTTCTATACAAAGTGAGTCA TGGTCCCCGAAAATAAAGGTTTAACTAAAAAATATATGTATACATGTATA TCTATGAATCTCACAGGCGAGTTTGAGAAGCTCCGAGCAAAGTGGGTCAT TGGACTATCCAAAAAGCGAAATTTCATCTCGAGGATGTATCCTTTAAACT TGAGCTATCCGTTTTGGAGTATCTAAACGTATACATAATAAGCTGTCTTT GCGAAAGTATGCTCAAGTTAGCCTCTCAGTTTGTACCCCCTCGAGCACAT AAAGTGCGCCCTCTCCCAACGCGAACTATGCAAATAATGCTGTGTCTCGG TGTATGATTTGTACACAAAATGCATCATCTCCGCAAATACCCAAGAGTTT TGACAATTGTTGATTTGCTTGCGTCAGTTTTGGGGAAGACATCCACCCCT CGGATGAATACGAACAATTCCAAATTGTTTCACAAACTGAAAGTTTTCGC CTGAGTTTTAGAATGAACTCATGTGTTCTATGTGCCCCGGACCATCCACG ACTGCTAATAATACTCGTAAATCCAATGGACAGGGGTGGGTACTTCATTG TATGTGTCGGCTCATTTTGAAACTCAGGTGAATACTTTCAGGTTTTTGCG AAAACCATTTGCAAGTGCTCGTATTTGTCCGAGGGGCGAAAGCATTCAAG TCTCATTTTTGAACTGCGTACAAAACGTAGGTCACATTCTAGCACATATT TTTGAATCACGTGCCTCCGCACGGGAAAAAAATTAGGTTCATGTAGCGGT GTCTGTTTCTCGGAGGGTGTTCTGGAGTTTACCGTGTAATTAAATCCTCT CGTGGTGGATCTTGAACTGGAAGATGTTTTCCTTTTATGTCTTCTACAGG GATGGTACCTCAGCCTGTACACATGGCGCCAAGTTTCGCGTTGATCCCAC GTCCCATGTATGTTCTCATTGCATGTGGTCAGAACGTCGAGGGAATATGA CAAAGTGAGGGAAAAAGGAGATATCTATGTTAATTTTATGCCCCTGTACC AAGCACAGGGTTGGTTCGTACACGGCAGTTAATTTGATGTCATGGACGCT GGTTTCTTCCTGTGTTTTTGCAGGTTGGGGCAGTACGACGTGGGTCAATT CAAAGATGATCGCGTACAAGGGCCTCTTCGCAAGTTCCAGCAAACCATCG AGGATATCGAGGACGATTTGGAGGAAAAGTGAGTCAAGAAATGGTTATTG TCATGTCATTAGTTAGGCGGAATGTGGGATTGAAGTGTGGCCTGTTTTTC GGTTCGTCACATATCCATCTTCAATCGATTAAGTTTTTATCAACTTGATC GAAAATAATGGATAATATTTGCCGCTCGTCACATTTCAAATCTTGGCGTA TTGTAATATTGAGAATATAACCAGAACGTGCTGACCTAGAACGGATCTTA GATGTGACCAAAACGTTTTGCTCGTATTTGCTCGTGTATTGCGTGATGCG CCAACAGCGCTGACTTAATCTCTGTCAACACACACTATGCCCCCAAGGGT TAGGGTTAGGGTCAAGACTAGGGATTAGAGTTCGGCGTTGGTTGCGCGCT CTTCGGGGTATGACGGAGCGTGGAGCACCAACTGAAGCGTCGGCAACTAA ATGTTATATGCGGTCTCCCTGAAATTGGGGTACCCACAGACTAGGCAACG CCGCGTTGAACGGTGGACATGTACCACAAATGGATGATAACCATTCGTGG TCTATGGGTCGACTTCCAGTCCTGCATGAGTTCTCCTTTGCCTAACTTGA GTTTTACCTTGAGACGTTGGGATCTTCACTGAAAGGGGCAATCGCATGTA TGTGTTGATGCAATAATAATGGCACCTCGTGGTTTATTTGGACACAGAAT GACCCCCTCGCTACCAAAGGTTTGAGTATACGTAGTACAAGTGATGGCGA TGGCTCTGTCGTAGAGTCTAGGCGTGTTAGCATTTCGTCGTCATTTCCTC CCCTTGCCTTTCCTTGCCCTCGTGAACACCCAGTACCACTTTTACGTAAA AATAGAATCAAGCATAATGATAATGACAACAATAATAATAATAATATTAA CAAAGAACAAAGATAAAGGCCTTTTGCTGACTTCTTGATGTGTGCTCTTA CCCCCTTTCATTTTCGTGTTTTGCTAATTTCCATGCACTTCCCCATCAAC AGGAACGCCGAGTTGATCTCCACCTGGCGCTCCCGTGACAAGACAGCTAA GAAGGCTCTCAACTTTGGTTACACCACACTACTCCCAGACAACATTCCTC AGTCCACCAATATCTAAGATACGAATCTTGTGCTTGTCTTGTCATCATGC TTGCGTGGGGTGGGTGGTTGCGATTTTCGGGTGTGATGGATGCTTGACGC CGACGGAATTTTTTCCCACAAGAGATTACAATTGGCGAAAAATGGGGGAG TGCTGTCAACGTGGCATGATAAACGAAAAACGTGAAAATATGGGCTTGGA GGCATGATGCTGAATGGTTTGAATATAAACACATTGTGAGCGCCGAATGT ATGAATGGATGTCGATACAGCGGAATCGGTCCATGGAAAGGCGGAGAAAG ATTCGTGCACAAGTAAAATATATATATTATGAACGCTCCTTGAAAGGGCG GAGAGGGGTTTTCGAGACTCGTAGTAGCACCGACTTGTGGAAGAGATGTC GAATCGTCTCTGATTGACGATTATGTATGACGTGTGGTGCGCTTTAGTTT TTGCTTCAAAATTAGTCTCTGGTGATGAGTAAGGCAGGAGAAGTGTAGGC ATTGCCTCGATATGCTCAGATTTTTTGTGCTCGACGAATCATGAGAAGCT ACGCCCGTTTTGTGGAACTTATGCTCCTCATATGCTCGATCTTTACAAGA ATTTAGGCCCCAATTGTGCTCGGATTTTCCCAGAATCTATGCTCAAAGGC CTAGTCCTGGCGCTTTTATGCGTACGGAGTGGATGCATTAGCCGTAGATG AGCTGAGTTTGAACGTAGACGTGAAGAGTTCAAATGGAGTAAAAGAAATG TCGTATATCTGACGATACGTCTGGGAGTGCGTGGAGGGTGTATATGATGT GTATCTGCGTCAGTGAGGTGTACTGTGCGTTGACTTCTGAAGATGCTAGA TCAGTGTTAGAGTTGATACTCGTGTAGTGGTGAGATAAGTCCATTCCGTT CGTTTTCAACGGCAGCAGGGAATAAACTTGTTCTTCACCCCGCACAGGAC ACATCGTTAGGTAGTGGGGAGTATATCGCAGGAACATTTATATGCTGCAC GTGGTAGCACGTGGACGCCAGCTACTTTCACGTCTACTTTTATTGTCGTT TGTATATACTCTCGAGTACAGATTAGCCGTCTACTCCGAAAAAGTGCCCA CCCGGTTTGTCTGTCGATTTGTATTTGGGTACGATGTACAGTAAATACTT CAATATATTGGCTTATTGCAAGCAGCAAGCATTCCGCTCGCGCGCTGACC GTAAATGTTGCGTGTAACCACTATTGAGAGGCGATGGGAAAACAGCGGCC CTTGAGGGGGGAAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2886:3474..18587-

>mRNA_H-paniculata_contig2886.7868.1 ID=mRNA_H-paniculata_contig2886.7868.1|Name=mRNA_H-paniculata_contig2886.7868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4008bp|location=Sequence derived from alignment at H-paniculata_contig2886:3474..18587- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCACGATCTAAGGCCATCGCGCTGATTGCTACACTAGTGGTAAGCTC
TGGCTACGCGTTCGTGCCGCCCACACTGCGTCCCGCACCTCCGAGGGGAG
CGCCTACGTGGGGTGGTTCTTGCAGTAGCCGTCCAGGTGTTTCTCCTCTG
GAATTGTCGCCGCTGGGCTCTTTCTCACCTCTGGATTCTATCGCCAACCT
TTTCCGCGATGGCACGATCTAAGGCCATCGCGCTGATTGCTACACTAGTG
GTAAGCTCTGGCTACGCGTTCGTGCCGCCCACACTGCGTCCCGCACCTCC
GAGGGGAGCGCCTACGTGGGGTGGTTCTTGCAGTAGCCGTCCAGGTGTTT
CTCCTCTGGAATTGTCGCCGCTGGGCTCTTTCTCACCTCTGGATTCTATC
GCCAACCTTTTCCGCGGACCGAATGAAGACATACCGTCTCTCCCACAGAA
TGACGGTAATGCTGACCAAGCCCAGCGCAAGAGTGAACTCGCTGAGAAGC
AGAAGGACTACCGTTGGAGCACCGAGGACCGAATGAAGACATACCGTCTC
TCCCACAGAATGACGGTAATGCTGACCAAGCCCAGCGCAAGAGTGAACTC
GCTGAGAAGCAGAAGGACTACCGTTGGAGCACCGAGGGTATCCCCGTAGG
CACGCCGTACCTCGAGGGCTTCCCCCCTGCGGAAGAACTGCCCGACGTAG
CCTGGGTCACGCAACTCGTAGGAGCGTTCCTCAAGATTGCGGTGGGCACC
ATCAGGGTATCCCCGTAGGCACGCCGTACCTCGAGGGCTTCCCCCCTGCG
GAAGAACTGCCCGACGTAGCCTGGGTCACGCAACTCGTAGGAGCGTTCCT
CAAGATTGCGGTGGGCACCATCAGAGGGACGGTGGGTGTCACTGAAATTG
TTGAGGCGATCTCAGATGCCGGGAGGGCCCGGACATTCATCCAACGTATC
TCGGAGTTGATCAAGGATGGCCAGGTTAACGAGAGGAGGGACGGTGGGTG
TCACTGAAATTGTTGAGGCGATCTCAGATGCCGGGAGGGCCCGGACATTC
ATCCAACGTATCTCGGAGTTGATCAAGGATGGCCAGGTTAACGAGAGGCC
GGTGGACATCGAAGACTACGAAGAGTTGCACCAGTTTCCCGTGAAGACCC
CCAAGACTGTGCATGACTATGAAGATGATGATGCCTTTGCCCGTCAACGG
CTCCAAGCCGGTGGACATCGAAGACTACGAAGAGTTGCACCAGTTTCCCG
TGAAGACCCCCAAGACTGTGCATGACTATGAAGATGATGATGCCTTTGCC
CGTCAACGGCTCCAAGGTGGGAACTGCGTGGTTATCGAGAAGTGCTCCGC
CGAAACGCGCAAGAAGCTGAAGGTCCTGGACTCTGACCCTGAGTACAAGG
CGAGCGTGGGAACTGCGTGGTTATCGAGAAGTGCTCCGCCGAAACGCGCA
AGAAGCTGAAGGTCCTGGACTCTGACCCTGAGTACAAGGCGAGCGCGTTG
AAGGAGAAGGTGGATTCTCTCATGAAGGCCGGGAAGCTGCTGGTTGTAGA
CCACGATTTGCTCAAGGCGTTGAAGGAGAAGGTGGATTCTCTCATGAAGG
CCGGGAAGCTGCTGGTTGTAGACCACGATTTGCTCAAGGACATGGAATCT
TCTCCCCTCGACGGAACCGTGGAGCGCTTCCTTGTCCCAAGCATCGCCCT
GTTCGAGGTGGTGGACGACATTCTGCCAATCAGGCCCATCGGTATTCAGG
ACATGGAATCTTCTCCCCTCGACGGAACCGTGGAGCGCTTCCTTGTCCCA
AGCATCGCCCTGTTCGAGGTGGTGGACGACATTCTGCCAATCAGGCCCAT
CGGTATTCAGCAGCTGAGCCAAAAGGAGGCTACCCCTATCTTCACTCCGG
ATGATGGCTACAACTGGATGATCGCCAAGGCTTGTTTCGAATCTGCCGAC
TTCATCAGCTGAGCCAAAAGGAGGCTACCCCTATCTTCACTCCGGATGAT
GGCTACAACTGGATGATCGCCAAGGCTTGTTTCGAATCTGCCGACTTCAT
TATCCACGAGGTGGTGTCCCATCTAGGCTTCACTCATGTTGTTCTTGAGG
GACCCGTGGTGGCCATGAACAGACAACTGCCCAAGGCCCACCCCATCCGC
GCCATCCTCGCGCCCCACCTCGAGGGCACGGCCTTGATCAACTGGGGCGC
TCAGAATTATCCACGAGGTGGTGTCCCATCTAGGCTTCACTCATGTTGTT
CTTGAGGGACCCGTGGTGGCCATGAACAGACAACTGCCCAAGGCCCACCC
CATCCGCGCCATCCTCGCGCCCCACCTCGAGGGCACGGCCTTGATCAACT
GGGGCGCTCAGAATCTGCTGATTGTGCCCGGCGCGGGCGTAGACCGCCTG
CAGTCTAATGCCATCGAAGACTCATGGACCATGGTGCTGGCAGAGGTGGT
GAAGCGTATCGCCAAAGACTTTTCCCCCCCGGAAGACTTCGCCGCCCGCG
GTGTGACGGTCGAGGAGTTCCGCGGCTACTACCCCTACCGTGACGTTGGC
ACCAAGTACTGGGAGGCCATCCACACCTGGGTCAAGGAGTACCTCGACCT
GCTGATTGTGCCCGGCGCGGGCGTAGACCGCCTGCAGTCTAATGCCATCG
AAGACTCATGGACCATGGTGCTGGCAGAGGTGGTGAAGCGTATCGCCAAA
GACTTTTCCCCCCCGGAAGACTTCGCCGCCCGCGGTGTGACGGTCGAGGA
GTTCCGCGGCTACTACCCCTACCGTGACGTTGGCACCAAGTACTGGGAGG
CCATCCACACCTGGGTCAAGGAGTACCTCGACATCTACTACACAAGCGAG
ACCGCCATGGAGGATGATTACGAGCTCAAGATCTACTACACAAGCGAGAC
CGCCATGGAGGATGATTACGAGCTCAAGGCCTTTGTGGACGAGATGGTGG
ACATCGCTCAATTCAAATGGCTATCCGAGTTCTACACCACTTCCAACAAG
CGCGAGCTAATCGCCAAAGTTCTGGCCAGCATCATCTACACGGCGAGCAC
CTTCCACGCGGCCGTGAACTTCCCTCAAAAGCCTCATATGTCGTTCGTCC
CCTCTACGCCCGGGTCGGTGTACGTGAAGCCGCCAACGGATAAGGCCTTT
GTGGACGAGATGGTGGACATCGCTCAATTCAAATGGCTATCCGAGTTCTA
CACCACTTCCAACAAGCGCGAGCTAATCGCCAAAGTTCTGGCCAGCATCA
TCTACACGGCGAGCACCTTCCACGCGGCCGTGAACTTCCCTCAAAAGCCT
CATATGTCGTTCGTCCCCTCTACGCCCGGGTCGGTGTACGTGAAGCCGCC
AACGGATAAGAAAGAGAGGACGTTCGACGAATACTTGAACTACCTGCCTC
CCATGGAAATAGCCACCGTACAGGTTACTATCCTCACGCTTCTCGGAGAC
ATCTTCTATACAAAAAAGAGAGGACGTTCGACGAATACTTGAACTACCTG
CCTCCCATGGAAATAGCCACCGTACAGGTTACTATCCTCACGCTTCTCGG
AGACATCTTCTATACAAAGTTGGGGCAGTACGACGTGGGTCAATTCAAAG
ATGATCGCGTACAAGGGCCTCTTCGCAAGTTCCAGCAAACCATCGAGGAT
ATCGAGGACGATTTGGAGGAAAAGTTGGGGCAGTACGACGTGGGTCAATT
CAAAGATGATCGCGTACAAGGGCCTCTTCGCAAGTTCCAGCAAACCATCG
AGGATATCGAGGACGATTTGGAGGAAAAGAACGCCGAGTTGATCTCCACC
TGGCGCTCCCGTGACAAGACAGCTAAGAAGGCTCTCAACTTTGGTTACAC
CACACTACTCCCAGACAACATTCCTCAGTCCACCAATATCTAAGAACGCC
GAGTTGATCTCCACCTGGCGCTCCCGTGACAAGACAGCTAAGAAGGCTCT
CAACTTTGGTTACACCACACTACTCCCAGACAACATTCCTCAGTCCACCA
ATATCTAA
back to top