prot_H-paniculata_contig28837.7861.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28837.7861.1
Unique Nameprot_H-paniculata_contig28837.7861.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig28837.7861.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 2.890e-16
Identity = 38/45 (84.44%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 AQLPPTPHYNSAILEDMCMKEHLAALHEICADSEAFRDAIILGKV 45
            + L  TPHYNSAILEDMCM EHLAALH IC DSEAFRDAIILGKV
Sbjct:  343 SSLSATPHYNSAILEDMCMTEHLAALHGICGDSEAFRDAIILGKV 387          
BLAST of mRNA_H-paniculata_contig28837.7861.1 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.000e-15
Identity = 37/45 (82.22%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 AQLPPTPHYNSAILEDMCMKEHLAALHEICADSEAFRDAIILGKV 45
            + L  TPHYNSAILEDMCM EHLAALH IC DS+AFRDAIILGKV
Sbjct:  348 SSLSATPHYNSAILEDMCMTEHLAALHGICGDSKAFRDAIILGKV 392          
BLAST of mRNA_H-paniculata_contig28837.7861.1 vs. uniprot
Match: A0A836CBT1_9STRA (Nrap protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 5.440e-8
Identity = 27/42 (64.29%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    4 PPTPHYNSAILEDMCMKEHLAALHEICADSEAFRDAIILGKV 45
            PPTP YN+A+LEDM M  HLAALH   A S   RDAI+L KV
Sbjct:  274 PPTPCYNAAVLEDMAMARHLAALHAASAASPGLRDAIMLAKV 315          
BLAST of mRNA_H-paniculata_contig28837.7861.1 vs. uniprot
Match: C3Z9X5_BRAFL (Nucleolar protein 6 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z9X5_BRAFL)

HSP 1 Score: 50.8 bits (120), Expect = 4.370e-6
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    4 PPTPHYNSAILEDMCMKEHLAALHEICADSEAFRDAIILGKV 45
            PPTPHYNS+IL DM M EHL  L  + AD  A R+ ++L KV
Sbjct:  218 PPTPHYNSSILVDMTMAEHLHHLFSLSADFPAMREGLVLLKV 259          
BLAST of mRNA_H-paniculata_contig28837.7861.1 vs. uniprot
Match: A0A8J9ZEW8_BRALA (Hypp1147 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZEW8_BRALA)

HSP 1 Score: 49.3 bits (116), Expect = 1.530e-5
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    4 PPTPHYNSAILEDMCMKEHLAALHEICADSEAFRDAIILGKV 45
            PPTPHYNS+IL DM M EHL  L  + A+  A R+ ++L KV
Sbjct:  322 PPTPHYNSSILVDMMMTEHLHHLFSLSAEVPAMREGLVLLKV 363          
BLAST of mRNA_H-paniculata_contig28837.7861.1 vs. uniprot
Match: S3CKE5_GLAL2 (U3 small nucleolar RNA-associated protein 22 n=1 Tax=Glarea lozoyensis (strain ATCC 20868 / MF5171) TaxID=1116229 RepID=S3CKE5_GLAL2)

HSP 1 Score: 48.1 bits (113), Expect = 3.930e-5
Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 AQLPPTPHYNSAILEDMCMKEHLAALHEICADSEAFRDAIILGKV 45
            A LP TP YNS++  D   + +L  LH     SEAFRDA++LG++
Sbjct:  290 APLPATPFYNSSLFSDANYEPYLQVLHSATKQSEAFRDAVVLGRI 334          
BLAST of mRNA_H-paniculata_contig28837.7861.1 vs. uniprot
Match: A0A822BGF1_9NEOB (Nucleolar protein 6 n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822BGF1_9NEOB)

HSP 1 Score: 47.8 bits (112), Expect = 5.380e-5
Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 AQLPPTPHYNSAILEDMCMKEHLAALHEICADSEAFRDAIILGKV 45
            A LPPTPHYN+A+L D+ M++H   L    +D  A +D I + KV
Sbjct:  283 ASLPPTPHYNNAVLSDLAMEQHFHHLSSCVSDFPAMKDGISILKV 327          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28837.7861.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FGX0_ECTSI2.890e-1684.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEV9_9PHAE1.000e-1582.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBT1_9STRA5.440e-864.29Nrap protein-domain-containing protein n=1 Tax=Tri... [more]
C3Z9X5_BRAFL4.370e-657.14Nucleolar protein 6 n=2 Tax=Branchiostoma floridae... [more]
A0A8J9ZEW8_BRALA1.530e-554.76Hypp1147 protein n=1 Tax=Branchiostoma lanceolatum... [more]
S3CKE5_GLAL23.930e-546.67U3 small nucleolar RNA-associated protein 22 n=1 T... [more]
A0A822BGF1_9NEOB5.380e-546.67Nucleolar protein 6 n=1 Tax=Ranitomeya imitator Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035082Nrap protein domain 1PFAMPF03813Nrapcoord: 2..31
e-value: 1.4E-7
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28837contigH-paniculata_contig28837:2057..2191 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28837.7861.1mRNA_H-paniculata_contig28837.7861.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28837 2057..2191 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28837.7861.1 ID=prot_H-paniculata_contig28837.7861.1|Name=mRNA_H-paniculata_contig28837.7861.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
AQLPPTPHYNSAILEDMCMKEHLAALHEICADSEAFRDAIILGKV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035082Nrap_D1