prot_H-paniculata_contig2881.7852.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2881.7852.1
Unique Nameprot_H-paniculata_contig2881.7852.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length404
Homology
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BLAST of mRNA_H-paniculata_contig2881.7852.1 vs. uniprot
Match: D7G702_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G702_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.280e-29
Identity = 126/390 (32.31%), Postives = 168/390 (43.08%), Query Frame = 0 
Query:    1 MFNVLASKLGEVQAFADGLGNPLEALSMDRLRDEEERKESSSSRQRESCRSPRARGDEPGGGVMDGLTLDDELQQGVDDGKIDGNTPHRGTATSLHYRRPAVSPRCAR-DNSDVSGCGGGHSAPGELELPHRHSQAEHEILMNGFGIMNKFGKIDDKDLECMGDDDDGNFEDEFDPILASIRKPPQPSPTASCASSSTVGGGSKNSSSPGKGGISEGGDRGK------RHDSGVSFGTGLRSIFPRNVRARAEDVVTQSSANMSKTAGAFRVAFGLGVNGTGGT--GWRRDSSTGMVREEGREKDLGTISSARRVGLGGGKCSGLGGEEDVLVLDANELLSEEERXXLAXXXXXXX-GRFCGWRRLRKYAPIVAGVALFSAIYLWRWKAL 380
            MF++LASK+GE QAFADGL N L+ ++MDRL +E+ER                 R                                                P+  + DN+++      H +P       R S +EH    + F  M   G                NFEDEFDPILASIRKP QP  + + A+SS    G              G +RG+      R  +G S   G  S+ P ++RA+A +V+ QSSA +S++A AFR A G G      T    RR S       +G + +L                 G G E+DV +++ NE+LSEEER  LA        GRFCGWRRLRKY P+  G+ L   +YLWRW  L
Sbjct:    1 MFDMLASKIGEAQAFADGLVN-LDVINMDRLLEEQERXXX--------XXXXXLRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIEIPQLRQEDNAELRS----HPSP-------RGSTSEHSSFGDRFASMEDGGV---------------NFEDEFDPILASIRKPQQPPASTTAAASSMSPRGRXXXXXXXX--XPSGRERGREANDAGRPTTGSSLAAGFLSMLPGDMRAKAGEVMAQSSARISESANAFRSALGPGGAAQSATDKSKRRQSDHTCRGVDGGDHELE---------------EGRGDEDDVRLMNVNEVLSEEERQQLASFAGGAGAGRFCGWRRLRKYVPVFVGIGLLGLLYLWRWTTL 338
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2881.7852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G702_ECTSI1.280e-2932.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 378..403
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 359..377
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..358

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2881contigH-paniculata_contig2881:7841..12253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2881.7852.1mRNA_H-paniculata_contig2881.7852.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2881 6683..12316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2881.7852.1 ID=prot_H-paniculata_contig2881.7852.1|Name=mRNA_H-paniculata_contig2881.7852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=404bp
MFNVLASKLGEVQAFADGLGNPLEALSMDRLRDEEERKESSSSRQRESCR
SPRARGDEPGGGVMDGLTLDDELQQGVDDGKIDGNTPHRGTATSLHYRRP
AVSPRCARDNSDVSGCGGGHSAPGELELPHRHSQAEHEILMNGFGIMNKF
GKIDDKDLECMGDDDDGNFEDEFDPILASIRKPPQPSPTASCASSSTVGG
GSKNSSSPGKGGISEGGDRGKRHDSGVSFGTGLRSIFPRNVRARAEDVVT
QSSANMSKTAGAFRVAFGLGVNGTGGTGWRRDSSTGMVREEGREKDLGTI
SSARRVGLGGGKCSGLGGEEDVLVLDANELLSEEERRQLATISGGGGGRF
CGWRRLRKYAPIVAGVALFSAIYLWRWKALPEDVAGVAGEAGEEAAALGP
GRI*
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