prot_H-paniculata_contig2879.7846.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2879.7846.1
Unique Nameprot_H-paniculata_contig2879.7846.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length204
Homology
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Match: A0A6H5JXI4_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXI4_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 7.270e-109
Identity = 145/204 (71.08%), Postives = 169/204 (82.84%), Query Frame = 0
Query:    1 MPPRSDTAIGARDDLQQSSSPSLQKEDFKRKPNLSEIRAQIPQECFQKSLTRSLFYMVRDMGCVMALQHVYPQYVAGNWPLTIAWWNANGFMLWCLFVVGHDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKDMSYPWFGREQFDTEMTRIAKFWLRTPFHPFTSYLFSYLFAGFYDGSHFNPLGEL 204
            MPPRSDTAIGA DD    S+ S+ + +   + +L  +R Q+P+ECF KSL RSLFYM RDMGCV+ALQ++YP YVAG+WPLT  WWNANGFMLW LFV+GHDCGHTTFSNYPW+NA+ GHLCHAPL VPFWPWAKSHNEHHKYHNHV KDMSYPWFG++QF+ E+    K +L+TPFHPFTSYLF+YL AG+YDGSHFNP   L
Sbjct:    1 MPPRSDTAIGANDD----STSSITRPNKDVRVDLMALRKQVPEECFIKSLPRSLFYMARDMGCVLALQYLYPIYVAGSWPLTFLWWNANGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKQQFEQEVKPFTKLFLKTPFHPFTSYLFTYLLAGWYDGSHFNPFSVL 200          
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Match: A0A835YPJ0_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ0_9STRA)

HSP 1 Score: 270 bits (689), Expect = 6.420e-87
Identity = 119/193 (61.66%), Postives = 143/193 (74.09%), Query Frame = 0
Query:   15 LQQSSSPSLQKED---FKRKPNLSEIRAQIPQECFQKSLTRSLFYMVRDMGCVMALQHVYPQYVAGNWPLTIAWWNANGFMLWCLFVVGHDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKDMSYPWFGREQFDTEMTRIAKFWLRTPFHPFTSYLFSYLFAGFYDGSHFNPLGEL 204
            LQQ+  P + K D    K K  +  ++  IP ECF KSL +SLFYMVRDMG + AL   YP YV GNWPLT  WWNA GFM+W LFVVGHDCGHTTFS Y W+NA+CGHLCHAPL VPFWPWA+SH++HH YHNHV KD S+PWF +EQ+ T+++ + +  L+TP HP  SY  SYLF G++DGSHFNP G L
Sbjct:    9 LQQADPPGVLKRDPMAVKDKLRMDVLKRIIPDECFHKSLVKSLFYMVRDMGLICALWKAYPVYVEGNWPLTFVWWNAMGFMMWALFVVGHDCGHTTFSEYTWVNAVCGHLCHAPLLVPFWPWAQSHHQHHSYHNHVEKDHSFPWFRKEQYATQLSGVGRTILKTPLHPLFSYGVSYLFFGYWDGSHFNPFGSL 201          
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Match: A0A1S7C7R3_9STRA (Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7R3_9STRA)

HSP 1 Score: 207 bits (527), Expect = 4.160e-62
Identity = 94/174 (54.02%), Postives = 114/174 (65.52%), Query Frame = 0
Query:   32 PNLSEIRAQIPQECFQKSLTRSLFYMVRDMGCVMALQHVYPQYVAG-NWPLTIAWWNANGFMLWCLFVVGHDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKDMSYPWFGREQFDTEMTRIAKFWLRTPFHPFTSYLFSYLFAGFYDGSHFNPLGEL 204
            P LS+I+  IP++CFQKSL RS +YM+RD   + AL  VYP   A    P    WWN  GF +WCLFV+GHDCGH +FS Y W+N ICGH+CHAPL VP+WPW KSH  HH YHNH+ KDMS+PW  +E F+ ++T   +  L  P   F  Y F YLFAG  DGSH  P   L
Sbjct:    7 PTLSQIKKAIPEKCFQKSLLRSFYYMLRDFAALAALYFVYPTVQAKYGLPGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWLNDICGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTKEVFE-DLTPFEQALLENPLSLFIKYTFLYLFAGKMDGSHVVPFSPL 179          
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Match: I2CR09_NANGC (Glycerolipid omega-3 fatty acid desaturase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR09_NANGC)

HSP 1 Score: 204 bits (519), Expect = 2.050e-60
Identity = 92/175 (52.57%), Postives = 116/175 (66.29%), Query Frame = 0
Query:   32 PNLSEIRAQIPQECFQKSLTRSLFYMVRDMGCVMALQHVYPQYVAGNWPLT--IAWWNANGFMLWCLFVVGHDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKDMSYPWFGREQFDTEMTRIAKFWLRTPFHPFTSYLFSYLFAGFYDGSHFNPLGEL 204
            P LS+++  IP++CFQKSL RS++YM+RD   + AL  +YP  V  N+ L     WWN  GF +WCLFV+GHDCGH +FS Y W N +CGH+CHAPL VP+WPW KSH  HH YHNH+ KDMS+PW  +E F+ ++T   +  L  P   F  Y F YLFAG  DGSH  P   L
Sbjct:   57 PTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPS-VQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE-DLTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPL 229          
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Match: A0A7S4PZI0_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4PZI0_9DINO)

HSP 1 Score: 201 bits (510), Expect = 7.900e-60
Identity = 88/173 (50.87%), Postives = 111/173 (64.16%), Query Frame = 0
Query:   32 PNLSEIRAQIPQECFQKSLTRSLFYMVRDMGCVMALQHVYPQYVAGNWPLTIAWWNANGFMLWCLFVVGHDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKDMSYPWFGREQFDTEMTRIAKFWLRTPFHPFTSYLFSYLFAGFYDGSHFNPLGEL 204
            P++ E+RA IP  CF KSL RSLFYM RD   +    + Y  + A  W     +WN  GF +WCLFVVGHDCGHT+FSNY W+N +CGH+CHAPL VP+WPW +SH+ HH YHNH  KD S+PW  R+Q   ++  I    +  P   F  Y + YL AG  DGSHF+P  +L
Sbjct:   45 PSMKELRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWM-RQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKL 216          
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Match: A0A6V1NJB0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NJB0_HETAK)

HSP 1 Score: 196 bits (497), Expect = 4.060e-58
Identity = 86/173 (49.71%), Postives = 110/173 (63.58%), Query Frame = 0
Query:   32 PNLSEIRAQIPQECFQKSLTRSLFYMVRDMGCVMALQHVYPQYVAGNWPLTIAWWNANGFMLWCLFVVGHDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKDMSYPWFGREQFDTEMTRIAKFWLRTPFHPFTSYLFSYLFAGFYDGSHFNPLGEL 204
            P+L E+RA IP  CF KSL RSLFYM RD+  +    + Y  + A  W     +WN  GF +WCLFVVGHDCGHT+FSNY W+N +CGH+C+APL VP+WPW +SH+ HH YHNH  KD   PW  +EQ   ++  I    +  P + F  Y + YL AG  DGSH +P  +L
Sbjct:   25 PSLKELRAAIPSHCFVKSLPRSLFYMFRDLVAICLCVYFYDTFKALGWSGLFIYWNLTGFSMWCLFVVGHDCGHTSFSNYGWLNDLCGHICNAPLLVPYWPWKRSHHLHHSYHNHTEKDKGRPWI-KEQEWAQLNAIQTAAMECPLYAFFGYTWIYLLAGIRDGSHLSPFSKL 196          
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Match: W7TW53_9STRA (Fatty acid desaturase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TW53_9STRA)

HSP 1 Score: 181 bits (459), Expect = 5.310e-55
Identity = 75/133 (56.39%), Postives = 96/133 (72.18%), Query Frame = 0
Query:   32 PNLSEIRAQIPQECFQKSLTRSLFYMVRDMGCVMALQHVYPQYVAGNWPLT--IAWWNANGFMLWCLFVVGHDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKDMSYPWFGREQFD 162
            P LS+++  IP++CFQKSL RS++YM+RD   + AL  +YP  V  N+ L     WWN  GF +WCLFV+GHDCGH +FS Y W N +CGH+CHAPL VP+WPW KSH  HH YHNH+ KDMS+PW  +E F+
Sbjct:    7 PTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPS-VQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE 138          
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Match: A0A7R9YMG6_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YMG6_DIALT)

HSP 1 Score: 178 bits (452), Expect = 1.930e-51
Identity = 85/172 (49.42%), Postives = 110/172 (63.95%), Query Frame = 0
Query:   34 LSEIRAQIPQECFQKSLTRSLFYMVRDMGCVMALQHVYPQYVAGNWPLT-IAWWNANGFMLWCLFVVGHDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKDMSYPWFGREQFDTEMTRIAKFWLRTPFHPFTSYLFSYLFAGFYDGSHFNPLGEL 204
            L +IR  IPQECF K   RSL+++ RD+  +     VYP   A   PL  +A+WN  GF +W LFVVGHDCGHTTFSN   +N +CGH+ HAPL VP++PWA SH  HH YHNH  KD S+PWF +     ++    + +L++P  PF +Y   YLF G +DGSH  PL +L
Sbjct:   26 LQDIRKVIPQECFVKDTGRSLWFLARDLAVLATAPLVYPHVAASANPLLYLAYWNFYGFFMWALFVVGHDCGHTTFSNSKLLNDVCGHIAHAPLLVPYYPWAMSHRRHHMYHNHQKKDASHPWFTKASMP-KLPAFTRSFLKSPLAPFLAYPI-YLFEGSFDGSHVFPLSKL 195          
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Match: A0A811KVY1_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KVY1_9BILA)

HSP 1 Score: 164 bits (414), Expect = 1.510e-45
Identity = 81/193 (41.97%), Postives = 114/193 (59.07%), Query Frame = 0
Query:   21 PSLQKEDFKRKPN------LSEIRAQIPQECFQKSLTRSLFYMVRDMGCVMALQHVYP---QYVAGNWPLTIAWWNANGFMLWCLFVVGHDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKDMSYPWFGREQFDTEMTRIAKFWLRTPFHPFTSYLFSYLFAGFYDGSHFNPLGEL 204
            PS+QK+   +KP       L E+R  IP ECF+K   +S+F++V D   +  L +  P   QY  G WP  + W+   G   + LFVVGHDCGH TFS Y W+N I GH+ HAP+  P+WPW KSH +HH+Y +H+ KD  +PW+ +E++  E   I +F+ + P   F  + F YL  G  DGSH+ P  +L
Sbjct:   17 PSVQKQSEVQKPQPPNLPTLEELRKAIPPECFEKDWRKSMFFLVWDYAVIAGLYYALPYIEQY--GGWPGLLVWYYVVGMFGFSLFVVGHDCGHGTFSEYTWLNDIIGHVAHAPILAPYWPWQKSHRQHHQYTSHLEKDKGHPWYTQEEYVQEPWVIQQFF-KFPLSAFVRWNFVYLTLGLPDGSHYWPYSKL 206          
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Match: A0A482S5W1_9ARCH (FA_desaturase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5W1_9ARCH)

HSP 1 Score: 158 bits (399), Expect = 3.050e-43
Identity = 80/183 (43.72%), Postives = 109/183 (59.56%), Query Frame = 0
Query:   33 NLSEIRAQIPQECFQKSLTRSLFYMVRDM----GCVMALQHVYPQYVAGNWPL------TIAWWNANGFMLWCLFVVGHDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKDMSYPWFGREQFDTEMTRIAKFWLRTP----FHPFTSYLFSYLFAGFYDGSHFNPL 201
            NL+E+R  IPQE FQKSL +SLFY+  D     G ++A+  +    +    P       +I +WN  GF +WC+FVVGHDCGHTTFS + W+N I GH+ H  L VPF+PW  SH  HH YHNHV+KD SY W+ ++  ++E ++  + +   P    F PF  +    L AG  DG HF P+
Sbjct:   34 NLNEMRNYIPQEAFQKSLPKSLFYLGFDYTMWGGALLAIHTLVNSTLWPTLPFWLQGLASILYWNVAGFFMWCIFVVGHDCGHTTFSKHTWLNNIIGHITHGSLLVPFFPWQLSHRRHHMYHNHVNKDYSYAWYTQDMLESEESKHMQLFHELPIVSFFLPFYGWFIYLLGAG--DGCHFLPI 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2879.7846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXI4_9PHAE7.270e-10971.08FA_desaturase domain-containing protein n=2 Tax=Ec... [more]
A0A835YPJ0_9STRA6.420e-8761.66Fatty acid desaturase n=1 Tax=Tribonema minus TaxI... [more]
A0A1S7C7R3_9STRA4.160e-6254.02Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 R... [more]
I2CR09_NANGC2.050e-6052.57Glycerolipid omega-3 fatty acid desaturase (Fragme... [more]
A0A7S4PZI0_9DINO7.900e-6050.87Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A6V1NJB0_HETAK4.060e-5849.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TW53_9STRA5.310e-5556.39Fatty acid desaturase n=1 Tax=Nannochloropsis gadi... [more]
A0A7R9YMG6_DIALT1.930e-5149.42Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]
A0A811KVY1_9BILA1.510e-4541.97Hypothetical protein n=1 Tax=Bursaphelenchus okina... [more]
A0A482S5W1_9ARCH3.050e-4343.72FA_desaturase domain-containing protein n=1 Tax=ar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005804Fatty acid desaturase domainPFAMPF00487FA_desaturasecoord: 83..193
e-value: 2.9E-14
score: 53.5
NoneNo IPR availablePANTHERPTHR32100FAMILY NOT NAMEDcoord: 24..203
NoneNo IPR availablePANTHERPTHR32100:SF0TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTICcoord: 24..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2879contigH-paniculata_contig2879:14998..19466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2879.7846.1mRNA_H-paniculata_contig2879.7846.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2879 14758..19466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2879.7846.1 ID=prot_H-paniculata_contig2879.7846.1|Name=mRNA_H-paniculata_contig2879.7846.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MPPRSDTAIGARDDLQQSSSPSLQKEDFKRKPNLSEIRAQIPQECFQKSL
TRSLFYMVRDMGCVMALQHVYPQYVAGNWPLTIAWWNANGFMLWCLFVVG
HDCGHTTFSNYPWINAICGHLCHAPLFVPFWPWAKSHNEHHKYHNHVHKD
MSYPWFGREQFDTEMTRIAKFWLRTPFHPFTSYLFSYLFAGFYDGSHFNP
LGEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005804FA_desaturase_dom