prot_H-paniculata_contig2879.7845.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2879.7845.1
Unique Nameprot_H-paniculata_contig2879.7845.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length456
Homology
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: D7FQB4_ECTSI (U-box domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB4_ECTSI)

HSP 1 Score: 572 bits (1473), Expect = 1.010e-200
Identity = 287/426 (67.37%), Postives = 339/426 (79.58%), Query Frame = 0
Query:   32 GNMDSWRDDDMRVALIVLLIATAWIAILIRKRQGKDTWLDRIVGNIGFGLGNSSAPGFSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTKEGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKRGDAQALALSALAEVPDQYRAIRRLGLI--SGSEGASHPMADLAMTGGGTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARLSTTMVVPNHALRNSIETFRQKRGY 455
            GN DSW DDDMRVA+IVLL+A  WI + +R +     WL+ +    G G G +  PGF+SL+ELVGALKDAGV+ AGLIVGVDFTRSNEWTG++VYG  +MHDI+  +PNPYQEVL+GVGRGLGPLNR ++IWCYGFGD NTRDE+VFCFM +D+PC NL QA+ RY +IAPAV LSGPTSFAPLIRKAIEIV+D  R+YHCLVIIADGQVTKE DTV+AIQDAS+YPLSIIM+GVGEGPW+TCR FDNRL GRR+DNFRFVEHR LK GDA+ALALSALAEVPDQYRAIR LG++  +G+ G+       ++ GGG                     XXX     SE D+DE VP++++CPLTLEVM++PVVCEDGHSYER ALEAWL+NH+TSPMSNA L++ M VPNHALRNSIE FR++RGY
Sbjct:   24 GNTDSWHDDDMRVAVIVLLMALGWIYLKLRGKDANKGWLEAL----GVGFGGNDPPGFASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHDIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDT-REYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMVGVGEGPWETCREFDNRLPGRRYDNFRFVEHRRLKYGDAEALALSALAEVPDQYRAIRALGIMEGAGAPGSGPTSVAASVAGGGVSGSAPSMAPVNMVMSGSAPPXXXP----SELDEDEGVPQDFICPLTLEVMIDPVVCEDGHSYERGALEAWLRNHDTSPMSNAHLNSKMAVPNHALRNSIEAFRRERGY 440          
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A8J4C8P0_9CHLO (U-box domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C8P0_9CHLO)

HSP 1 Score: 283 bits (723), Expect = 5.790e-87
Identity = 167/431 (38.75%), Postives = 237/431 (54.99%), Query Frame = 0
Query:   89 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFV---EHRCLKRGDAQA----LALSALAEVPDQYRAIRRLGLIS-------------------------------GSEGA-----------SHPMADLAM---TGGGTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARL-STTMVVPNHALRNSIETFRQKRG 454
            F++++E+  AL+  G+ S+ LIV VDFT+SNEWTG++ +GGK++H I G  P+PY++ +  +GR L   +    I CYGFGDV T D SVF F+P D+PC  L+Q + RY  + P V ++GPTSFAP IR+A  IVE  G QYH L+++ADGQV++            E DT+ AI +AS  PLSIIM+GVG+GPWD  + FD+ L  R+FDNF+FV   E      G+ +      AL AL E+P+QY+ I+RLGL+S                               GS G+           + P++  A+   TGGG                              + D        +LCP+T +VM +PV+  DG++YER A+  WL+N   SPM+NA +   T ++PNHALR+SI  ++Q  G
Sbjct:   49 FANVEEVQDALRKGGLESSNLIVSVDFTKSNEWTGKRSFGGKSLHTI-GDVPSPYEDAIGAIGRTLSAFDDDGLIPCYGFGDVTTGDRSVFSFLPGDKPCEGLEQVLWRYRELCPYVRMAGPTSFAPAIRQASRIVEQSGYQYHILLLVADGQVSRSSDLLPGQHSDQEADTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTEVMASTSGNVERREALFALRALMEIPEQYQMIQRLGLMSTNSIVRARAPRRKPANPVLDPPVPPSIMSGLGSGGSVPKQLTKTTPIAEPLSAAAVGVITGGGKSGAQAGGDGLGVGFGGSTRVGTTDDRKGPQPDP------MFLCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWKQDNG 472          
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A8J4F4Y0_9CHLO (U-box domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F4Y0_9CHLO)

HSP 1 Score: 281 bits (718), Expect = 3.140e-86
Identity = 179/425 (42.12%), Postives = 249/425 (58.59%), Query Frame = 0
Query:   89 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKRGDAQALA-------LSALAEVPDQYRAIRRLGLISGSE----GASH----------PMADLAMTGGGTXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------APSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARL-STTMVVPNHALRNSIETFRQKRG 454
            F+S++E+  AL+  G+ S+ LIV VDFT+SNEWTG++ +GGK++H I G  P+PY++ +  +GR L   +    I CYGFGDV T D SVF F+P D+PC  L+Q + RY  + P V ++GPTSFAP IR+A  IVE  G QYH L+++ADGQV++            E DT+ AI +AS  PLSIIM+GVG+GPWD  + FD+ L  R+FDNF+FV    +    +  LA       L AL E+P+QY+ I+RLGL+S +      A H          P+    M G G+          XXXXXXXXXXXXXXX                         A ++E  +       ++CP+T +VM +PV+  DG++YER A+  WL+N   SPM+NA +   T ++PNHALR+SI  ++Q  G
Sbjct:   49 FASVEEVQEALRKGGLESSNLIVSVDFTKSNEWTGKRSFGGKSLHTI-GDVPSPYEDAIGAIGRTLSAFDDDGLIPCYGFGDVTTGDRSVFSFLPGDKPCEGLEQVLWRYRELCPYVRMAGPTSFAPAIRQACRIVEQSGYQYHILLLVADGQVSRSSDLLPGQYSDQEQDTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTDVMANSSGNLARREALFALRALMEIPEQYQMIQRLGLMSRNSIVRTRAPHRKPINPVLDPPVPPSIMNGLGSGASVSKPPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSTGARTAEDRKGPQPDSMFVCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWKQDHG 472          
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A835WNU3_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WNU3_9CHLO)

HSP 1 Score: 268 bits (685), Expect = 7.520e-81
Identity = 166/450 (36.89%), Postives = 235/450 (52.22%), Query Frame = 0
Query:   89 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLK------RGDAQAL-ALSALAEVPDQYRAIRRLGLISGSEGAS---------------------HPMADLAM----------TGG---------------------------------GTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARL-STTMVVPNHALRNSIETFRQKRG 454
            +SSL+++   L+  G+ S+ LIV VDFT+SNEWTG+  +GG+++H I G +PNPY+E +  +GR L   +    I CYGFGDV T D SVF F+ +D+PC  L+QA+ RY  + P + ++GPTSFAP IR+A  IVE  G QYH L+++ADGQV++            E DT+ AI +ASS PLSIIM+GVG+GPWD  + FD+ L  R FDNF+FV    L       R   +AL AL AL E+P+QY AI+R+G++  +  A                      H MA  A            GG                                 GT                         AP++     + +   ++CP+T +VM +PV+  DG++YER A+  WL     SP++N R+    +++PNH LR+SI  +RQK G
Sbjct:   64 YSSLEQVQDDLRKNGLESSNLIVAVDFTKSNEWTGKGSFGGRSLHAI-GDQPNPYEEAIGVIGRTLSAFDDDGLIPCYGFGDVTTGDSSVFSFLADDQPCRGLEQALWRYRELCPYIRMAGPTSFAPAIRQASRIVEASGGQYHILLLVADGQVSRPSGLPDNVKSEQEQDTIDAIVEASSLPLSIIMVGVGDGPWDLMKDFDDALPERAFDNFQFVNFSELMSSTQGDRSRREALFALRALMEIPEQYNAIQRMGILGRTAAAQVARGRTQRRPGNPPLDPPVPPHLMAGTASGPSTTTTCGPAGGAXXXXXXXXXXXXXXXXXXXXSGAGDAAAAPSKGTQSARTSGTGYGVAAGGGGPTGPTPMAPAAGGPVPDPM---FVCPITQDVMKDPVIATDGYTYERAAITDWLARKAVSPLTNQRMPGGNVLIPNHNLRSSIMEWRQKHG 509          
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A150G6Z6_GONPE (U-box domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G6Z6_GONPE)

HSP 1 Score: 253 bits (647), Expect = 6.420e-76
Identity = 181/445 (40.67%), Postives = 246/445 (55.28%), Query Frame = 0
Query:   89 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKR-----GDA-----QAL-ALSAL------------------------------------------------------AEVPD--QYRAIRRLGLISGSEGASHPMADLAMTGGGTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARLSTTMVVPNHALRNSIETFRQKRG 454
            F+++D++  AL+  G+ S+ LIV VDFT+SNEWTG++ +GGK++H I G  P+PY+E +  +GR L   +    I CYGFGD  T D  VF F+ ND PC  LDQ + RY  + P V ++GPTSFAP IR+A  IVE  G QYH L+++ADGQV++            E DT+ AI +AS  PLSI+M+GVG+GPWD  + FD+ L  R FDNF+FV    +       GDA     +AL AL AL                                                      A +P   Q        + +G  G S        T G T XXXXXXXXXXXXXXXXXXXXXXXX  ++     + +   +LCP+T +VM +PV+  DG+SY+R A+  WL  H TSP++NAR+    ++PNHALR++I  ++Q+ G
Sbjct:   10 FTTVDQVQEALRKGGLESSNLIVAVDFTKSNEWTGKRSFGGKSLHAI-GDVPSPYEEAIGVIGRTLAAFDDDGLIPCYGFGDATTGDRGVFSFLANDTPCQGLDQVLWRYRELCPYVRMAGPTSFAPAIRQAARIVERSGNQYHILLLVADGQVSRSSDLPSHQHSSQEQDTIDAIVEASHLPLSIVMVGVGDGPWDLMKDFDDALPQREFDNFQFVNFTDVVSQTPGSGDAARQRREALFALRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIAYGSAGAGLPPRGQQAPAASYPVAAGPTGGSKEAGCSGATAGKTSXXXXXXXXXXXXXXXXXXXXXXXXXXAASGPTPDPM---FLCPITHDVMADPVIATDGYSYDRTAITTWLARHETSPLTNARMPGATLIPNHALRSAIMEWKQRNG 450          
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A835Y3U0_9CHLO (U-box domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y3U0_9CHLO)

HSP 1 Score: 254 bits (648), Expect = 1.470e-75
Identity = 152/445 (34.16%), Postives = 223/445 (50.11%), Query Frame = 0
Query:   89 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTKEGD------------TVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKRG---DAQ----ALALSALAEVPDQYRAIRRLGLISGSEGAS-----------------------------------------------------------HPMADLAMTGGGTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARL-STTMVVPNHALRNSIETFRQKRG 454
            + +LD++  AL+  G+ S+ LIV VDFT+SNEWTG+  + G+++H I G   +PY+E +  +GR L   +    I CYGFGD  T D+SVF F+  D+PC  L+QA+ RY  + P V ++GPTSFAP IR+A  IVE  G QYH L+++ADGQV++  D            T+ AI +AS  PLSIIM+GVG+GPWD  + FD+ L  R FDNF+FV    +      D Q      AL AL EVP+QY AI++ G++  S  A+                                                            P  +  M+  G+                          P+       D    YLCP+T ++M +PV+  DG++YER A+  WL+  + SP++N  +    +++PNH LR++I  ++Q+ G
Sbjct:   54 YQTLDQVTDALRRGGLESSNLIVAVDFTKSNEWTGKVSFQGRSLHAI-GDVASPYEEAISVIGRTLSAFDDDGLIPCYGFGDATTGDKSVFSFLAGDKPCQGLEQALWRYRELCPYVRMAGPTSFAPAIRQACSIVEASGGQYHILLLVADGQVSRSSDLPKGRFSEQEQETIDAIVEASFLPLSIIMVGVGDGPWDLMKDFDDALPQREFDNFQFVNFTDIMNSTGMDRQRRETVFALRALMEVPEQYSAIQKAGIMGSSSTAAANRSXXXXXRGNPPLDPPVPQHMLTGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARNKTMSADGSRPTGGAGASGAAAQTRNSYSGGTPADPAPAAGAQPD--PMYLCPITQDLMTDPVIATDGYTYERAAITDWLKRKSVSPLTNQPMPGGAVLIPNHGLRSAIMEWKQRNG 495          
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A8J9RJQ7_9CHLO (Probable E3 ubiquitin-protein ligase RGLG2 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RJQ7_9CHLO)

HSP 1 Score: 254 bits (649), Expect = 1.650e-75
Identity = 165/482 (34.23%), Postives = 241/482 (50.00%), Query Frame = 0
Query:   89 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVE-HRCLK--RGD----AQAL-ALSALAEVPDQYRAIRRLGLISGSEGAS-------------------------------HPMADLAMTGGGTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYD-----------QDEDVPKE------------------------------------------------------YLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARLSTTMVVPNHALRNSIETFRQKRG 454
            F+ L+E+  AL+  G+ S+ LI+G+DFT+SN W+G+  +GG ++H + G + NPY++ +  V R L P +  +QI  YGFGD +T D  VF  +P ++PC  L+Q + RY  IAP V+L+GPTSFAPLI +A+  V   G QYH L+++ADGQVT+            E  T+ AI  AS++PLSI+M+GVG+GP+D  R FD+ L  RRFDNF+FV+  R ++  RG     A+AL AL AL E+PDQYR + RLGLI G+   S                                P+A     G  +                         A SS ++           Q + VP                                                        +LCP+T +VM +PV+  DG++YER A+E+WL+NH TSP+SN +L    ++ NH+LR++I  ++Q+  
Sbjct:   31 FNRLEEVQNALRINGLESSQLIIGIDFTKSNTWSGKHSFGGLSLHHV-GQQLNPYEQAISIVARTLAPFDDDNQIPAYGFGDESTHDTHVFSLLPRNQPCQGLEQVLWRYRTIAPHVKLAGPTSFAPLIHQAMRDVAASGMQYHILLLLADGQVTRSVELNPGEYSNQERATMDAIVMASNFPLSIVMVGVGDGPFDMMREFDDALPTRRFDNFQFVDMSRVMRETRGQPPEKAEALFALRALMEIPDQYRTLLRLGLIGGAPNPSIMARLMPPALGPPPAVLAAERVAATAPSFPGSPIATNGSFGNLSFVPHSQAQNVPHPHLHAGGPLGAGPAASSSHEDLIEERLRHELQQQQVPTAPYPSLSYTVGISTPPPSAYASPSVAAPADRPIGQDSSTHGVHGARLDLDEPDPMFLCPITQDVMKDPVMAADGYTYERLAIESWLENHVTSPISNEQLPNKSLIANHSLRSAILEWQQRHS 511          
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A835SM75_CHLIN (U-box domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SM75_CHLIN)

HSP 1 Score: 255 bits (651), Expect = 1.680e-75
Identity = 178/489 (36.40%), Postives = 251/489 (51.33%), Query Frame = 0
Query:   89 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFV---EHRCLKRGDA---QAL-ALSALAEVPDQYRAIRRLGLISGSEGA-----------------------------SHPMADLAMTGGG--------------------------------------------------------------------------TXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARL-STTMVVPNHALRNSIETFRQKRG 454
            + SL+++   L+  G+ S+ LIV VDFT+SNEWTG++ +GG+++H I G +PNPY+E +  +GR L   +    I CYGFGDV T D SVF F+ +D+PC  L+QA+ RY  + P + ++GPTSFAP IR+A  IVE  G QYH L+++ADGQV++            E +T+ AI +ASS PLSIIM+GVG+GPWD  + FD+ L  R FDNF+FV   E     +GD    +AL AL AL E+P+QY AI+R+G++ G+  A                             S P    A   GG                                                                          T       XXXXXXXXXXXXXXX   AP++     + +   ++CP+T +VM +PV+  DG++YER A+  WL     SP++NA++     ++PNH LR+SI  ++QK G
Sbjct:   56 YGSLEQVQDDLRKNGLESSNLIVAVDFTKSNEWTGKRSFGGRSLHAI-GEQPNPYEEAIGVIGRTLSAFDDDGLIPCYGFGDVTTGDSSVFSFLADDQPCRGLEQALWRYRELCPYIRMAGPTSFAPAIRQAARIVEGSGGQYHILLLVADGQVSRPSGMPEHHKSEQEQETINAIVEASSLPLSIIMVGVGDGPWDLMKDFDDALPERSFDNFQFVNFSELMATTQGDRTRREALFALRALMEIPEQYNAIQRMGILGGTAAAQLARSRTQRRRGNPPLDPPVPPHLMSGSTSGPSTSAAAGAGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPPPRPPSASCSGTYXXXXXXXXXXXXXXXXXXXGPSKGTQSARTSGXXXXXXXXXXXXXXXTPVAPAASGPVPDPM---FVCPITQDVMRDPVIATDGYTYERSAITDWLARKAVSPLTNAKMPGGNTLIPNHNLRSSIMEWKQKNG 540          
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A804KUW3_MUSAM (RING-type E3 ubiquitin transferase n=3 Tax=Musaceae TaxID=4637 RepID=A0A804KUW3_MUSAM)

HSP 1 Score: 248 bits (632), Expect = 1.520e-74
Identity = 123/254 (48.43%), Postives = 175/254 (68.90%), Query Frame = 0
Query:   89 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKRGDAQ------ALALSALAEVPDQYRAIRRL 324
            FSSLD+++ AL+++G+ S+ LI+G+DFT+SNEWTG+  +G +++H I G  PNPY++ +  +GR L P +  + I CYGFGD +TR++SVF F P++ PC   ++A+ RY +I P ++LSGPTSFAP+I+ +I+IV+    QYH LVIIADGQV +            EG T+KAI DAS +PLSIIM+GVG+GPWDT   FD+ +  RRFDNF+FV    +     +      A AL+AL E+P QY+A + L
Sbjct:   35 FSSLDQVISALRESGLESSNLILGIDFTKSNEWTGRNSFGRRSLHAIGGT-PNPYEQAISIIGRTLSPFDEDNLIPCYGFGDTSTREQSVFSFYPDNRPCHGFEEALARYRDIVPHLKLSGPTSFAPVIQASIDIVKKSNWQYHVLVIIADGQVARNSDVPQGRLSPQEGATMKAIVDASFFPLSIIMVGVGDGPWDTMEHFDDCIPERRFDNFQFVNFTNIMSAKMEMSKKEAAFALAALMEIPFQYKATQGL 287          
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A6I9Q9S9_ELAGV (E3 ubiquitin-protein ligase RGLG3 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9Q9S9_ELAGV)

HSP 1 Score: 247 bits (631), Expect = 2.870e-74
Identity = 126/258 (48.84%), Postives = 174/258 (67.44%), Query Frame = 0
Query:   86 APGFSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFV-------EHRCLKRGDAQALALSALAEVPDQYRAIRRL 324
            A  FSSLDE++ AL+DAG+ S+ LI+G+DFT+SNEWTG++ +  +++H I G  PNPY++ +  +GR L P +  + I C+GFGD +TRDE VF F PN  PC   ++A++ Y  I P + LSGPTSFAPLI  +I+IVE    QYH LVI+ADGQVT+            E +T+ AI +AS YPLSI+M+GVG+GPWD  + FD+ +  R FDNF+FV       E+  + + +A A AL+AL E+P QYRA + L
Sbjct:   41 ADNFSSLDEVITALRDAGLESSNLILGIDFTKSNEWTGRRSFNQRSLHAI-GDTPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTRDEYVFSFFPNHRPCNGFEEALSHYREIVPCLTLSGPTSFAPLILASIDIVERSHGQYHVLVIVADGQVTRNPSLPHGRLSPQERETIDAIVEASYYPLSIVMVGVGDGPWDAMKQFDDYVPQRSFDNFQFVNFTKIMSENMTMSKKEA-AFALAALMEIPLQYRATQGL 296          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB4_ECTSI1.010e-20067.37U-box domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A8J4C8P0_9CHLO5.790e-8738.75U-box domain-containing protein n=1 Tax=Volvox ret... [more]
A0A8J4F4Y0_9CHLO3.140e-8642.12U-box domain-containing protein n=2 Tax=Volvox afr... [more]
A0A835WNU3_9CHLO7.520e-8136.89U-box domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A150G6Z6_GONPE6.420e-7640.67U-box domain-containing protein n=1 Tax=Gonium pec... [more]
A0A835Y3U0_9CHLO1.470e-7534.16U-box domain-containing protein n=1 Tax=Edaphochla... [more]
A0A8J9RJQ7_9CHLO1.650e-7534.23Probable E3 ubiquitin-protein ligase RGLG2 at N-te... [more]
A0A835SM75_CHLIN1.680e-7536.40U-box domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A804KUW3_MUSAM1.520e-7448.43RING-type E3 ubiquitin transferase n=3 Tax=Musacea... [more]
A0A6I9Q9S9_ELAGV2.870e-7448.84E3 ubiquitin-protein ligase RGLG3 n=2 Tax=Arecacea... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 106..298
e-value: 0.0059
score: 25.8
IPR003613U box domainSMARTSM00504Ubox_2coord: 387..449
e-value: 2.0E-23
score: 93.8
IPR003613U box domainPFAMPF04564U-boxcoord: 384..452
e-value: 1.1E-17
score: 64.0
IPR003613U box domainPROSITEPS51698U_BOXcoord: 383..455
score: 30.953
IPR010734CopinePFAMPF07002Copinecoord: 132..325
e-value: 3.9E-51
score: 173.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 368..454
e-value: 3.8E-28
score: 99.4
NoneNo IPR availablePANTHERPTHR45751:SF11COPINE FAMILY PROTEIN 1coord: 85..407
NoneNo IPR availablePANTHERPTHR45751FAMILY NOT NAMEDcoord: 85..407
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..455
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 374..454
NoneNo IPR availableTMHMMTMhelixcoord: 43..60
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 108..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2879contigH-paniculata_contig2879:4023..11434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2879.7845.1mRNA_H-paniculata_contig2879.7845.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2879 4017..12314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2879.7845.1 ID=prot_H-paniculata_contig2879.7845.1|Name=mRNA_H-paniculata_contig2879.7845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=456bp
MKMGGGSGKRDHGHPPGRQTHGNRGKIAYGTGNMDSWRDDDMRVALIVLL
IATAWIAILIRKRQGKDTWLDRIVGNIGFGLGNSSAPGFSSLDELVGALK
DAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGV
GRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYEN
IAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTKEGDTVK
AIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKR
GDAQALALSALAEVPDQYRAIRRLGLISGSEGASHPMADLAMTGGGTGGM
APGMAGGHIGGGGSGQPSVSPSAPSSEYDQDEDVPKEYLCPLTLEVMMNP
VVCEDGHSYERRALEAWLQNHNTSPMSNARLSTTMVVPNHALRNSIETFR
QKRGY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR003613Ubox_domain
IPR010734Copine
IPR013083Znf_RING/FYVE/PHD
IPR036465vWFA_dom_sf