mRNA_H-paniculata_contig2879.7845.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: D7FQB4_ECTSI (U-box domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB4_ECTSI) HSP 1 Score: 571 bits (1472), Expect = 5.090e-196 Identity = 287/426 (67.37%), Postives = 339/426 (79.58%), Query Frame = 1
Query: 100 GNMDSWRDDDMRVALIVLLIATAWIAILIRKRQGKDTWLDRIVGNIGFGLGNSSAPGFSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTKEGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKRGDAQALALSALAEVPDQYRAIRRLGLI--SGSEGASHPMADLAMTGGGTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARLSTTMVVPNHALRNSIETFRQKRGY 1371
GN DSW DDDMRVA+IVLL+A WI + +R + WL+ + G G G + PGF+SL+ELVGALKDAGV+ AGLIVGVDFTRSNEWTG++VYG +MHDI+ +PNPYQEVL+GVGRGLGPLNR ++IWCYGFGD NTRDE+VFCFM +D+PC NL QA+ RY +IAPAV LSGPTSFAPLIRKAIEIV+D R+YHCLVIIADGQVTKE DTV+AIQDAS+YPLSIIM+GVGEGPW+TCR FDNRL GRR+DNFRFVEHR LK GDA+ALALSALAEVPDQYRAIR LG++ +G+ G+ ++ GGG XXX SE D+DE VP++++CPLTLEVM++PVVCEDGHSYER ALEAWL+NH+TSPMSNA L++ M VPNHALRNSIE FR++RGY
Sbjct: 24 GNTDSWHDDDMRVAVIVLLMALGWIYLKLRGKDANKGWLEAL----GVGFGGNDPPGFASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHDIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDT-REYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMVGVGEGPWETCREFDNRLPGRRYDNFRFVEHRRLKYGDAEALALSALAEVPDQYRAIRALGIMEGAGAPGSGPTSVAASVAGGGVSGSAPSMAPVNMVMSGSAPPXXXP----SELDEDEGVPQDFICPLTLEVMIDPVVCEDGHSYERGALEAWLRNHDTSPMSNAHLNSKMAVPNHALRNSIEAFRRERGY 440
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A8J4C8P0_9CHLO (U-box domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C8P0_9CHLO) HSP 1 Score: 282 bits (722), Expect = 1.820e-83 Identity = 167/431 (38.75%), Postives = 237/431 (54.99%), Query Frame = 1
Query: 271 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFV---EHRCLKRGDAQA----LALSALAEVPDQYRAIRRLGLIS-------------------------------GSEGA-----------SHPMADLAM---TGGGTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARL-STTMVVPNHALRNSIETFRQKRG 1368
F++++E+ AL+ G+ S+ LIV VDFT+SNEWTG++ +GGK++H I G P+PY++ + +GR L + I CYGFGDV T D SVF F+P D+PC L+Q + RY + P V ++GPTSFAP IR+A IVE G QYH L+++ADGQV++ E DT+ AI +AS PLSIIM+GVG+GPWD + FD+ L R+FDNF+FV E G+ + AL AL E+P+QY+ I+RLGL+S GS G+ + P++ A+ TGGG + D +LCP+T +VM +PV+ DG++YER A+ WL+N SPM+NA + T ++PNHALR+SI ++Q G
Sbjct: 49 FANVEEVQDALRKGGLESSNLIVSVDFTKSNEWTGKRSFGGKSLHTI-GDVPSPYEDAIGAIGRTLSAFDDDGLIPCYGFGDVTTGDRSVFSFLPGDKPCEGLEQVLWRYRELCPYVRMAGPTSFAPAIRQASRIVEQSGYQYHILLLVADGQVSRSSDLLPGQHSDQEADTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTEVMASTSGNVERREALFALRALMEIPEQYQMIQRLGLMSTNSIVRARAPRRKPANPVLDPPVPPSIMSGLGSGGSVPKQLTKTTPIAEPLSAAAVGVITGGGKSGAQAGGDGLGVGFGGSTRVGTTDDRKGPQPDP------MFLCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWKQDNG 472
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A8J4F4Y0_9CHLO (U-box domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F4Y0_9CHLO) HSP 1 Score: 280 bits (717), Expect = 9.470e-83 Identity = 179/425 (42.12%), Postives = 249/425 (58.59%), Query Frame = 1
Query: 271 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKRGDAQALA-------LSALAEVPDQYRAIRRLGLISGSE----GASH----------PMADLAMTGGGTXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------APSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARL-STTMVVPNHALRNSIETFRQKRG 1368
F+S++E+ AL+ G+ S+ LIV VDFT+SNEWTG++ +GGK++H I G P+PY++ + +GR L + I CYGFGDV T D SVF F+P D+PC L+Q + RY + P V ++GPTSFAP IR+A IVE G QYH L+++ADGQV++ E DT+ AI +AS PLSIIM+GVG+GPWD + FD+ L R+FDNF+FV + + LA L AL E+P+QY+ I+RLGL+S + A H P+ M G G+ XXXXXXXXXXXXXXX A ++E + ++CP+T +VM +PV+ DG++YER A+ WL+N SPM+NA + T ++PNHALR+SI ++Q G
Sbjct: 49 FASVEEVQEALRKGGLESSNLIVSVDFTKSNEWTGKRSFGGKSLHTI-GDVPSPYEDAIGAIGRTLSAFDDDGLIPCYGFGDVTTGDRSVFSFLPGDKPCEGLEQVLWRYRELCPYVRMAGPTSFAPAIRQACRIVEQSGYQYHILLLVADGQVSRSSDLLPGQYSDQEQDTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTDVMANSSGNLARREALFALRALMEIPEQYQMIQRLGLMSRNSIVRTRAPHRKPINPVLDPPVPPSIMNGLGSGASVSKPPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSTGARTAEDRKGPQPDSMFVCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWKQDHG 472
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A835WNU3_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WNU3_9CHLO) HSP 1 Score: 268 bits (684), Expect = 1.750e-77 Identity = 166/450 (36.89%), Postives = 235/450 (52.22%), Query Frame = 1
Query: 271 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLK------RGDAQAL-ALSALAEVPDQYRAIRRLGLISGSEGAS---------------------HPMADLAM----------TGG---------------------------------GTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARL-STTMVVPNHALRNSIETFRQKRG 1368
+SSL+++ L+ G+ S+ LIV VDFT+SNEWTG+ +GG+++H I G +PNPY+E + +GR L + I CYGFGDV T D SVF F+ +D+PC L+QA+ RY + P + ++GPTSFAP IR+A IVE G QYH L+++ADGQV++ E DT+ AI +ASS PLSIIM+GVG+GPWD + FD+ L R FDNF+FV L R +AL AL AL E+P+QY AI+R+G++ + A H MA A GG GT AP++ + + ++CP+T +VM +PV+ DG++YER A+ WL SP++N R+ +++PNH LR+SI +RQK G
Sbjct: 64 YSSLEQVQDDLRKNGLESSNLIVAVDFTKSNEWTGKGSFGGRSLHAI-GDQPNPYEEAIGVIGRTLSAFDDDGLIPCYGFGDVTTGDSSVFSFLADDQPCRGLEQALWRYRELCPYIRMAGPTSFAPAIRQASRIVEASGGQYHILLLVADGQVSRPSGLPDNVKSEQEQDTIDAIVEASSLPLSIIMVGVGDGPWDLMKDFDDALPERAFDNFQFVNFSELMSSTQGDRSRREALFALRALMEIPEQYNAIQRMGILGRTAAAQVARGRTQRRPGNPPLDPPVPPHLMAGTASGPSTTTTCGPAGGAXXXXXXXXXXXXXXXXXXXXSGAGDAAAAPSKGTQSARTSGTGYGVAAGGGGPTGPTPMAPAAGGPVPDPM---FVCPITQDVMKDPVIATDGYTYERAAITDWLARKAVSPLTNQRMPGGNVLIPNHNLRSSIMEWRQKHG 509
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A150G6Z6_GONPE (U-box domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G6Z6_GONPE) HSP 1 Score: 253 bits (646), Expect = 1.080e-72 Identity = 181/445 (40.67%), Postives = 246/445 (55.28%), Query Frame = 1
Query: 271 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKR-----GDA-----QAL-ALSAL------------------------------------------------------AEVPD--QYRAIRRLGLISGSEGASHPMADLAMTGGGTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARLSTTMVVPNHALRNSIETFRQKRG 1368
F+++D++ AL+ G+ S+ LIV VDFT+SNEWTG++ +GGK++H I G P+PY+E + +GR L + I CYGFGD T D VF F+ ND PC LDQ + RY + P V ++GPTSFAP IR+A IVE G QYH L+++ADGQV++ E DT+ AI +AS PLSI+M+GVG+GPWD + FD+ L R FDNF+FV + GDA +AL AL AL A +P Q + +G G S T G T XXXXXXXXXXXXXXXXXXXXXXXX ++ + + +LCP+T +VM +PV+ DG+SY+R A+ WL H TSP++NAR+ ++PNHALR++I ++Q+ G
Sbjct: 10 FTTVDQVQEALRKGGLESSNLIVAVDFTKSNEWTGKRSFGGKSLHAI-GDVPSPYEEAIGVIGRTLAAFDDDGLIPCYGFGDATTGDRGVFSFLANDTPCQGLDQVLWRYRELCPYVRMAGPTSFAPAIRQAARIVERSGNQYHILLLVADGQVSRSSDLPSHQHSSQEQDTIDAIVEASHLPLSIVMVGVGDGPWDLMKDFDDALPQREFDNFQFVNFTDVVSQTPGSGDAARQRREALFALRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIAYGSAGAGLPPRGQQAPAASYPVAAGPTGGSKEAGCSGATAGKTSXXXXXXXXXXXXXXXXXXXXXXXXXXAASGPTPDPM---FLCPITHDVMADPVIATDGYSYDRTAITTWLARHETSPLTNARMPGATLIPNHALRSAIMEWKQRNG 450
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A835Y3U0_9CHLO (U-box domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y3U0_9CHLO) HSP 1 Score: 253 bits (647), Expect = 2.480e-72 Identity = 152/445 (34.16%), Postives = 223/445 (50.11%), Query Frame = 1
Query: 271 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTKEGD------------TVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKRG---DAQ----ALALSALAEVPDQYRAIRRLGLISGSEGAS-----------------------------------------------------------HPMADLAMTGGGTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARL-STTMVVPNHALRNSIETFRQKRG 1368
+ +LD++ AL+ G+ S+ LIV VDFT+SNEWTG+ + G+++H I G +PY+E + +GR L + I CYGFGD T D+SVF F+ D+PC L+QA+ RY + P V ++GPTSFAP IR+A IVE G QYH L+++ADGQV++ D T+ AI +AS PLSIIM+GVG+GPWD + FD+ L R FDNF+FV + D Q AL AL EVP+QY AI++ G++ S A+ P + M+ G+ P+ D YLCP+T ++M +PV+ DG++YER A+ WL+ + SP++N + +++PNH LR++I ++Q+ G
Sbjct: 54 YQTLDQVTDALRRGGLESSNLIVAVDFTKSNEWTGKVSFQGRSLHAI-GDVASPYEEAISVIGRTLSAFDDDGLIPCYGFGDATTGDKSVFSFLAGDKPCQGLEQALWRYRELCPYVRMAGPTSFAPAIRQACSIVEASGGQYHILLLVADGQVSRSSDLPKGRFSEQEQETIDAIVEASFLPLSIIMVGVGDGPWDLMKDFDDALPQREFDNFQFVNFTDIMNSTGMDRQRRETVFALRALMEVPEQYSAIQKAGIMGSSSTAAANRSXXXXXRGNPPLDPPVPQHMLTGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARNKTMSADGSRPTGGAGASGAAAQTRNSYSGGTPADPAPAAGAQPD--PMYLCPITQDLMTDPVIATDGYTYERAAITDWLKRKSVSPLTNQPMPGGAVLIPNHGLRSAIMEWKQRNG 495
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A8J9RJQ7_9CHLO (Probable E3 ubiquitin-protein ligase RGLG2 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RJQ7_9CHLO) HSP 1 Score: 254 bits (648), Expect = 2.820e-72 Identity = 165/482 (34.23%), Postives = 241/482 (50.00%), Query Frame = 1
Query: 271 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVE-HRCLK--RGD----AQAL-ALSALAEVPDQYRAIRRLGLISGSEGAS-------------------------------HPMADLAMTGGGTXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYD-----------QDEDVPKE------------------------------------------------------YLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARLSTTMVVPNHALRNSIETFRQKRG 1368
F+ L+E+ AL+ G+ S+ LI+G+DFT+SN W+G+ +GG ++H + G + NPY++ + V R L P + +QI YGFGD +T D VF +P ++PC L+Q + RY IAP V+L+GPTSFAPLI +A+ V G QYH L+++ADGQVT+ E T+ AI AS++PLSI+M+GVG+GP+D R FD+ L RRFDNF+FV+ R ++ RG A+AL AL AL E+PDQYR + RLGLI G+ S P+A G + A SS ++ Q + VP +LCP+T +VM +PV+ DG++YER A+E+WL+NH TSP+SN +L ++ NH+LR++I ++Q+
Sbjct: 31 FNRLEEVQNALRINGLESSQLIIGIDFTKSNTWSGKHSFGGLSLHHV-GQQLNPYEQAISIVARTLAPFDDDNQIPAYGFGDESTHDTHVFSLLPRNQPCQGLEQVLWRYRTIAPHVKLAGPTSFAPLIHQAMRDVAASGMQYHILLLLADGQVTRSVELNPGEYSNQERATMDAIVMASNFPLSIVMVGVGDGPFDMMREFDDALPTRRFDNFQFVDMSRVMRETRGQPPEKAEALFALRALMEIPDQYRTLLRLGLIGGAPNPSIMARLMPPALGPPPAVLAAERVAATAPSFPGSPIATNGSFGNLSFVPHSQAQNVPHPHLHAGGPLGAGPAASSSHEDLIEERLRHELQQQQVPTAPYPSLSYTVGISTPPPSAYASPSVAAPADRPIGQDSSTHGVHGARLDLDEPDPMFLCPITQDVMKDPVMAADGYTYERLAIESWLENHVTSPISNEQLPNKSLIANHSLRSAILEWQQRHS 511
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A835SM75_CHLIN (U-box domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SM75_CHLIN) HSP 1 Score: 254 bits (650), Expect = 2.920e-72 Identity = 178/489 (36.40%), Postives = 251/489 (51.33%), Query Frame = 1
Query: 271 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFV---EHRCLKRGDA---QAL-ALSALAEVPDQYRAIRRLGLISGSEGA-----------------------------SHPMADLAMTGGG--------------------------------------------------------------------------TXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEYDQDEDVPKEYLCPLTLEVMMNPVVCEDGHSYERRALEAWLQNHNTSPMSNARL-STTMVVPNHALRNSIETFRQKRG 1368
+ SL+++ L+ G+ S+ LIV VDFT+SNEWTG++ +GG+++H I G +PNPY+E + +GR L + I CYGFGDV T D SVF F+ +D+PC L+QA+ RY + P + ++GPTSFAP IR+A IVE G QYH L+++ADGQV++ E +T+ AI +ASS PLSIIM+GVG+GPWD + FD+ L R FDNF+FV E +GD +AL AL AL E+P+QY AI+R+G++ G+ A S P A GG T XXXXXXXXXXXXXXX AP++ + + ++CP+T +VM +PV+ DG++YER A+ WL SP++NA++ ++PNH LR+SI ++QK G
Sbjct: 56 YGSLEQVQDDLRKNGLESSNLIVAVDFTKSNEWTGKRSFGGRSLHAI-GEQPNPYEEAIGVIGRTLSAFDDDGLIPCYGFGDVTTGDSSVFSFLADDQPCRGLEQALWRYRELCPYIRMAGPTSFAPAIRQAARIVEGSGGQYHILLLVADGQVSRPSGMPEHHKSEQEQETINAIVEASSLPLSIIMVGVGDGPWDLMKDFDDALPERSFDNFQFVNFSELMATTQGDRTRREALFALRALMEIPEQYNAIQRMGILGGTAAAQLARSRTQRRRGNPPLDPPVPPHLMSGSTSGPSTSAAAGAGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPPPRPPSASCSGTYXXXXXXXXXXXXXXXXXXXGPSKGTQSARTSGXXXXXXXXXXXXXXXTPVAPAASGPVPDPM---FVCPITQDVMRDPVIATDGYTYERSAITDWLARKAVSPLTNAKMPGGNTLIPNHNLRSSIMEWKQKNG 540
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A804KUW3_MUSAM (RING-type E3 ubiquitin transferase n=3 Tax=Musaceae TaxID=4637 RepID=A0A804KUW3_MUSAM) HSP 1 Score: 248 bits (632), Expect = 1.590e-71 Identity = 123/254 (48.43%), Postives = 175/254 (68.90%), Query Frame = 1
Query: 271 FSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFVEHRCLKRGDAQ------ALALSALAEVPDQYRAIRRL 978
FSSLD+++ AL+++G+ S+ LI+G+DFT+SNEWTG+ +G +++H I G PNPY++ + +GR L P + + I CYGFGD +TR++SVF F P++ PC ++A+ RY +I P ++LSGPTSFAP+I+ +I+IV+ QYH LVIIADGQV + EG T+KAI DAS +PLSIIM+GVG+GPWDT FD+ + RRFDNF+FV + + A AL+AL E+P QY+A + L
Sbjct: 35 FSSLDQVISALRESGLESSNLILGIDFTKSNEWTGRNSFGRRSLHAIGGT-PNPYEQAISIIGRTLSPFDEDNLIPCYGFGDTSTREQSVFSFYPDNRPCHGFEEALARYRDIVPHLKLSGPTSFAPVIQASIDIVKKSNWQYHVLVIIADGQVARNSDVPQGRLSPQEGATMKAIVDASFFPLSIIMVGVGDGPWDTMEHFDDCIPERRFDNFQFVNFTNIMSAKMEMSKKEAAFALAALMEIPFQYKATQGL 287
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Match: A0A6I9Q9S9_ELAGV (E3 ubiquitin-protein ligase RGLG3 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9Q9S9_ELAGV) HSP 1 Score: 247 bits (631), Expect = 2.960e-71 Identity = 126/258 (48.84%), Postives = 174/258 (67.44%), Query Frame = 1
Query: 262 APGFSSLDELVGALKDAGVTSAGLIVGVDFTRSNEWTGQKVYGGKNMHDINGPEPNPYQEVLKGVGRGLGPLNRGDQIWCYGFGDVNTRDESVFCFMPNDEPCGNLDQAMTRYENIAPAVELSGPTSFAPLIRKAIEIVEDGGRQYHCLVIIADGQVTK------------EGDTVKAIQDASSYPLSIIMIGVGEGPWDTCRVFDNRLHGRRFDNFRFV-------EHRCLKRGDAQALALSALAEVPDQYRAIRRL 978
A FSSLDE++ AL+DAG+ S+ LI+G+DFT+SNEWTG++ + +++H I G PNPY++ + +GR L P + + I C+GFGD +TRDE VF F PN PC ++A++ Y I P + LSGPTSFAPLI +I+IVE QYH LVI+ADGQVT+ E +T+ AI +AS YPLSI+M+GVG+GPWD + FD+ + R FDNF+FV E+ + + +A A AL+AL E+P QYRA + L
Sbjct: 41 ADNFSSLDEVITALRDAGLESSNLILGIDFTKSNEWTGRRSFNQRSLHAI-GDTPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTRDEYVFSFFPNHRPCNGFEEALSHYREIVPCLTLSGPTSFAPLILASIDIVERSHGQYHVLVIVADGQVTRNPSLPHGRLSPQERETIDAIVEASYYPLSIVMVGVGDGPWDAMKQFDDYVPQRSFDNFQFVNFTKIMSENMTMSKKEA-AFALAALMEIPLQYRATQGL 296 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2879.7845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2879.7845.1 >prot_H-paniculata_contig2879.7845.1 ID=prot_H-paniculata_contig2879.7845.1|Name=mRNA_H-paniculata_contig2879.7845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=456bp MKMGGGSGKRDHGHPPGRQTHGNRGKIAYGTGNMDSWRDDDMRVALIVLLback to top mRNA from alignment at H-paniculata_contig2879:4017..12314+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2879.7845.1 ID=mRNA_H-paniculata_contig2879.7845.1|Name=mRNA_H-paniculata_contig2879.7845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8298bp|location=Sequence derived from alignment at H-paniculata_contig2879:4017..12314+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2879:4017..12314+ >mRNA_H-paniculata_contig2879.7845.1 ID=mRNA_H-paniculata_contig2879.7845.1|Name=mRNA_H-paniculata_contig2879.7845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2736bp|location=Sequence derived from alignment at H-paniculata_contig2879:4017..12314+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |