prot_H-paniculata_contig2877.7842.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2877.7842.1
Unique Nameprot_H-paniculata_contig2877.7842.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length233
Homology
BLAST of mRNA_H-paniculata_contig2877.7842.1 vs. uniprot
Match: D8LNJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ6_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 3.360e-86
Identity = 127/194 (65.46%), Postives = 154/194 (79.38%), Query Frame = 0
Query:   42 MTGSAAESFLRRHQVLQLSFWIQLLFAILYAMATMDVTGQCYSEPCSSDSPTITSGLGIVTTMAAFIFICQPCYGLYLLRIQCSELVAGIFIGCSALATLGALHEAILWGSVPGLAVAIASEAGLEVNSSGVMSFKALSVLAWILFGLMSFSTWTSCTSRDVLLEVTWVPSHDYSQLPTRS--RANGTKLSTYQ 233
            M G+  ESF+RRHQ+L LSFW+ LLF+IL+AMA MDVTGQCY +PCS+ SP +TSG+ +VT M+AF+FI QPCYGLYLLRIQCSELV+GIFIGCS   TLGAL + + WGS   LA AIA EA  +VNSSGVMSFKAL++LAWILF +  F+T+  C +RDVLLEV+W   HDY+QLPTR+    NG K S+YQ
Sbjct:    1 MAGTGTESFVRRHQMLSLSFWVTLLFSILFAMAAMDVTGQCYVDPCSTSSPAVTSGMSLVTAMSAFLFIAQPCYGLYLLRIQCSELVSGIFIGCSTFTTLGALGQGVQWGSETSLATAIADEADTDVNSSGVMSFKALAILAWILFAMQLFTTYWCCKARDVLLEVSWSAGHDYTQLPTRAGLHGNGNKFSSYQ 194          
BLAST of mRNA_H-paniculata_contig2877.7842.1 vs. uniprot
Match: A0A6H5KYA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA0_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.960e-46
Identity = 80/126 (63.49%), Postives = 95/126 (75.40%), Query Frame = 0
Query:  110 ICQPCYGLYLLRIQCSELVAGIFIGCSALATLGALHEAILWGSVPGLAVAIASEAGLEVNSSGVMSFKALSVLAWILFGLMSFSTWTSCTSRDVLLEVTWVPSHDYSQLPTRS--RANGTKLSTYQ 233
            I  PCYGLYLLRIQCSELV+GIFIGCS   TLGA  + + WGS   LA AIA EA  +VNSSGV+SFKAL++LAWILF +  F+T+  C +RDVLLEV+W   HDY+QLPTR+    NG K S+YQ
Sbjct:    8 IVVPCYGLYLLRIQCSELVSGIFIGCSTFTTLGAFAQGVQWGSETALATAIADEADTDVNSSGVISFKALAILAWILFAMQLFTTYWCCKARDVLLEVSWSAGHDYTQLPTRAGLHGNGNKFSSYQ 133          
BLAST of mRNA_H-paniculata_contig2877.7842.1 vs. uniprot
Match: A0A6H5KXA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXA2_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 3.240e-24
Identity = 44/71 (61.97%), Postives = 58/71 (81.69%), Query Frame = 0
Query:   42 MTGSAAESFLRRHQVLQLSFWIQLLFAILYAMATMDVTGQCYSEPCSSDSPTITSGLGIVTTMAAFIFICQ 112
            M G+  ESF+R+HQ+L LSFW+ LLF+IL+AMA MDVTGQCY +PCS+ SP +T G+ +VT +AAF+FI Q
Sbjct:    1 MAGAGTESFVRKHQMLSLSFWVTLLFSILFAMAAMDVTGQCYVDPCSTISPAVTGGMSLVTAIAAFLFIAQ 71          
BLAST of mRNA_H-paniculata_contig2877.7842.1 vs. uniprot
Match: A0A7S2V6B5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6B5_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 4.100e-19
Identity = 54/160 (33.75%), Postives = 87/160 (54.37%), Query Frame = 0
Query:   53 RHQVLQLSFWIQLLFAILYAMATMDVTGQCYSEPCSSDSPTITSGLGIVTTMAAFIFICQPCYGLYLLRIQCSELVAGIFIGCSALATLGALHEAILWGSV----PGLAVAIASEAGLEVNSS--GVMSFKALSVLAWILFGLMSFSTWTSCTSRDVLLE 206
            R  +L  +  +QL+ A+++A A++ V+G CY+ PC      +++G      + AF+++ QP YGLY L+ +C+++V G FIG + +  + AL  A+ WGS       L  A+ S   L    S   + +F A+SVL+W  FGLM+      C  RD   E
Sbjct:   13 RKNILTGTLILQLVIAVVFAKASISVSGSCYTTPCYWK---VSNGAAFAANLIAFMYMLQPIYGLYFLKKRCAQIVGGAFIGATLIMAVIALLSAVYWGSEIHSPETLVEALVSSNILPAKYSFQSLNTFMAMSVLSWTQFGLMALCYGLLCICRDYFCE 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2877.7842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNJ6_ECTSI3.360e-8665.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYA0_9PHAE1.960e-4663.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXA2_9PHAE3.240e-2461.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V6B5_9STRA4.100e-1933.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..192
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 121..126
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 193..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..153
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 56..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2877contigH-paniculata_contig2877:6598..17628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2877.7842.1mRNA_H-paniculata_contig2877.7842.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2877 6598..17628 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2877.7842.1 ID=prot_H-paniculata_contig2877.7842.1|Name=mRNA_H-paniculata_contig2877.7842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
LIFALHISASGSQGRATTVPKYPIAVSKQGVCLLCYSFAMTMTGSAAESF
LRRHQVLQLSFWIQLLFAILYAMATMDVTGQCYSEPCSSDSPTITSGLGI
VTTMAAFIFICQPCYGLYLLRIQCSELVAGIFIGCSALATLGALHEAILW
GSVPGLAVAIASEAGLEVNSSGVMSFKALSVLAWILFGLMSFSTWTSCTS
RDVLLEVTWVPSHDYSQLPTRSRANGTKLSTYQ
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