mRNA_H-paniculata_contig2876.7839.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Match: D8LDG8_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG8_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 1.140e-140 Identity = 225/299 (75.25%), Postives = 250/299 (83.61%), Query Frame = 3
Query: 318 LTRASWLRTGASLASIASLVFALGSRVEAATGGGSVTVIGAGGKTGKECVEYLVARGTAATAVARSLTNSEGEPLKFTANDKVKLTTADVTVPSSLPEVVKGSSAVIFASSASKQGGSAKAVDYEGVVNVARACLEMKVPRLVVVSSGGVASPNSSVYKFLNLFGEIMSWKIRGEDELRSMYAAQGSSATCHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESIYSPAAEDCTLECYYKDTAKPLDTVGLSNMLRQTVKPEGAQVMGTERRGDTWEALFTGLKRDA 1214
++R WLR GASLA++A VFALG +A VTV+GAGGKTG+ECVEYL ++GT AVARSLTN EGEPL FT + + TADVTVPSSLP V+KG+SAVIFASSASKQGGSAKAVDYEGVVNVA+ACLE KVPRLVVVSSGGVA+P SS+YKFLNLFGEIMSWKI+GED+LRSMYAAQ CHYTIVRPGGLTLDPPRGV AIELNQGDTKSGRIARADVARVCVESIYS AEDCTLECYYKDTAKPL VG+SN+L+Q + A+ GTE GDTW+ALF+GLK DA
Sbjct: 78 MSRGEWLRVGASLAAMAP-VFALGKEDASAATSSDVTVLGAGGKTGRECVEYLASKGTGVRAVARSLTNKEGEPLAFTTTKGITMETADVTVPSSLPGVIKGASAVIFASSASKQGGSAKAVDYEGVVNVAKACLEAKVPRLVVVSSGGVATPESSIYKFLNLFGEIMSWKIQGEDQLRSMYAAQD---VCHYTIVRPGGLTLDPPRGVGAIELNQGDTKSGRIARADVARVCVESIYSRNAEDCTLECYYKDTAKPLAAVGVSNILKQKTD-DTAKSFGTESTGDTWDALFSGLKHDA 371
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Match: A0A836CLV1_9STRA (NADH(P)-binding-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV1_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.750e-90 Identity = 163/272 (59.93%), Postives = 194/272 (71.32%), Query Frame = 3
Query: 405 ATGGGSVTVIGAGGKTGKECVEYLVARGTAATAVARSLTNSEGEPLKFTANDKVKLTTA---DVTVPSSLPEVVKGSSAVIFASSASKQGGSAKAVDYEGVVNVARACLEMKVPRLVVVSSGGVASPNSSVYKFLNLFGEIMSWKIRGEDELRSMYAAQGSSATCHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESIYSPAAEDCTLECYYKDTAKPLDTVGLSNMLRQTVKPEGAQVMGTERRGDTWEALFTGLKRD 1211
A GG+VTV+GA GKTG ECV+ L+A+G A TA +RS LK D L TA DVT SS+ VKG+ VIFA+SASK GG+A+AVDY+GVVN A+ACLE VPRLV+VSSGGV+ PNS VYKFLNLFGEIM +K GE+E+R++YA S A C+YTIVRPGGLTL PP GV +E+NQGD SGRIARADVA +CVE+IYS A D T ECY DT KPLD+VG+SN+L+QT P G + RG TW LF GL+ D
Sbjct: 36 AAAGGAVTVLGANGKTGTECVKQLLAKGIACTATSRS------GSLKSEFEDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYAQ--SDAPCYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGP-GTPAPSSAHRGSTWAQLFQGLEPD 298
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Match: A0A7S0HMC0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HMC0_9CRYP) HSP 1 Score: 286 bits (733), Expect = 5.390e-88 Identity = 163/312 (52.24%), Postives = 214/312 (68.59%), Query Frame = 3
Query: 315 LLTRASWLRTGASLASIASL---VFALGSRVE----AATGGGSVTVIGAGGKTGKECVEYLVARGTAATAVARSLTNSEGEPLKFTANDK-VKLTTADVTVPSSLPEVVKGSSAVIFASSASKQGGSAKAVDYEGVVNVARACLEMKVPRLVVVSSGGVASPNSSVYKFLNLFGEIMSWKIRGEDELRSMYAA---QGSSATCHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESIYSPAAEDCTLECYYKDTAKPLDTVGLSNMLRQTVKPEGAQ--VMGTERRGDTWEALFTGLKRD 1211
++T S R G +I+SL VF L + V A GGSV V+GAGG TGKECV+ L+ RG A+ R+ TNS+G+ + V D+T P +L + +KG A+IFA+SASK+GG + VDY+G++N A+ C++ + RLVVVSSG V+ P+S+VYKFLNLFG IM WKI+GE+E++SMY A + S + YTIVRPGGLT P GV++IELNQGDTKSGRIARADVA +CVESI+S A D T ECYYKDTAKPL+ VGLSN+ ++ AQ + G ER+GD+W LF+GL++D
Sbjct: 61 VITMVSENRRGMLKGAISSLLAPVFGLSTSVSESMAAVPTGGSVAVVGAGGGTGKECVDALIRRGIPVRAIIRAKTNSKGKDFVLEGDSSLVSEIVGDITAPDTLRDPLKGCKALIFAASASKKGGDPQKVDYQGLLNCAQLCIDQNIERLVVVSSGAVSRPDSAVYKFLNLFGSIMYWKIQGENEMKSMYKAAKAKNPSFSGSYTIVRPGGLTEGPSLGVSSIELNQGDTKSGRIARADVAEICVESIFSKDAADTTFECYYKDTAKPLEGVGLSNLFKKKTSDTEAQSNLTGKERQGDSWPKLFSGLEKD 372
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Match: L1IPP0_GUITC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IPP0_GUITC) HSP 1 Score: 281 bits (718), Expect = 9.620e-87 Identity = 152/292 (52.05%), Postives = 199/292 (68.15%), Query Frame = 3
Query: 354 LASIASLVFALGSRVEAATGGGSVTVIGAGGKTGKECVEYLVARGTAATAVARSLTNSEGEPLKFTANDK-VKLTTADVTVPSSLPEVVKGSSAVIFASSASKQGGSAKAVDYEGVVNVARACLEMKVPRLVVVSSGGVASPNSSVYKFLNLFGEIMSWKIRGEDELRSMYAA---QGSSATCHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESIYSPAAEDCTLECYYKDTAKPLDTVGLSNMLRQTVKPEGAQ--VMGTERRGDTWEALFTGLKRD 1211
LA + + A+ + AA GGS+ V+GA G TGKECV LV RG A+ R+ TNS+G+ + V D+T P +L + +KG A+IFA+SASK+GG K VDY+G++N A+ C++ + RLVVVSSG V+ P+S+VYKFLNLFG IM WKI+GE+E++ MY + + S C YTIVRPGGLT GV+++ELNQGDTKSGRIARADVA +CVESI+S A D T ECYYKDTAKPL+ VGLSN+ ++ AQ + G ER+ D+W LF GL +D
Sbjct: 10 LAPLLGISVAVSDSLAAAPTGGSIAVVGASGGTGKECVNALVRRGIPVRAIIRAKTNSKGKDFVLEGDSSLVSEVIGDITSPDTLRDSLKGCKALIFAASASKKGGDPKQVDYQGLLNCAQLCIDQNIERLVVVSSGAVSRPDSAVYKFLNLFGSIMYWKIQGENEMKGMYKSAREKNPSFACSYTIVRPGGLTEGAALGVSSVELNQGDTKSGRIARADVAEICVESIFSKDAADTTFECYYKDTAKPLEGVGLSNLFKKKTSDTEAQSIMTGKERQADSWPKLFAGLDKD 301
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Match: A0A7S2HEC2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HEC2_9STRA) HSP 1 Score: 271 bits (694), Expect = 5.890e-82 Identity = 149/267 (55.81%), Postives = 188/267 (70.41%), Query Frame = 3
Query: 423 VTVIGAGGKTGKECVEYLVARGTAATAVARSLTNSEGEPLKFT---ANDKVKLTTADVTVPSSLPEVVKGSSAVIFASSASKQGGSAKAVDYEGVVNVARACLEMKVPRLVVVSSGGVASPNSSVYKFLNLFGEIMSWKIRGEDELRSMYAAQGSSAT-CHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESIYSPAAEDCTLECYYKDTAKPLDTVGLSNMLRQTVKPEGAQVMGTERRGDTWEALFTGLKRD 1211
V +IGA G+TG ECV+YL + G A +RS T + E + T ++ ++ DVT P +L ++GS AVIFA+SASK GG+A AVD G+VNVA+AC+E VPRLV+VSSGGV+ P+S VY FLN+FG IM KIRGED +R MY + S YT+VRPGGLT DPPRGV A+ELNQGDTKSGRI+RADVA +CVE + S AA T ECY DTA PL +VG+SN+++ K A V G ERRG+TW ALF+GL++D
Sbjct: 127 VIIIGANGRTGTECVKYLASSGMPVVATSRSGTYNALEEVSSTLPPSSTLLREAACDVTKPETLTSTIQGSKAVIFAASASKAGGTAAAVDNTGLVNVAKACIECNVPRLVIVSSGGVSKPDSPVYLFLNIFGNIMEEKIRGEDAVREMYKSLPSGKNGLSYTVVRPGGLTTDPPRGVAAVELNQGDTKSGRISRADVAAICVECLSSDAAAGTTFECYDADTAAPLASVGMSNIMK--AKTREAFVSGKERRGETWGALFSGLEKD 391
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Match: A0A7S3UTL3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTL3_HETAK) HSP 1 Score: 259 bits (661), Expect = 1.940e-77 Identity = 147/280 (52.50%), Postives = 189/280 (67.50%), Query Frame = 3
Query: 417 GSVTVIGAGGKTGKECVEYLVARGTAATAVARSLTNSEGEPLKFTA------------NDKVKLTTADVTVPSSLPEVVK-GSSAVIFASSASKQGGSAKAVDYEGVVNVARACLEMKVPRLVVVSSGGVASPNSSVYKFLNLFGEIMSWKIRGEDELRSMYAAQGSSATCHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESIYSPAAEDCTLECYYKDTAKPLDTVGLSNMLRQTVKPEGAQVMGT--ERRGDTWEALFTGLKRD 1211
G V V+GAGGKTGKECV L+ G A +RS G P A + A+V ++L EV+ G + VIFA+SASK+GG+AK VDYEG+V VA+AC+ +VPRLVVVSSGGV+ P+S+VYKFLNLFGEIM +K+ GEDE++++YAA G+ A YT+VRPGGLT +P +GV A+ELNQGDTKSGRIARADVA + V ++ PAA++ ECY DT+KPL+ VG SN++++ E A T ERR D+W LF GLK D
Sbjct: 89 GPVVVLGAGGKTGKECVYSLLRNGVPCIATSRS-----GAPQLDAAAXXXXXXXXXXXXXXLSFAAANVVQETTLTEVITPGIAGVIFAASASKKGGTAKEVDYEGLVKVAKACIAAEVPRLVVVSSGGVSKPDSAVYKFLNLFGEIMKYKVMGEDEVKALYAAAGNPAL-GYTVVRPGGLTEEPAKGVAALELNQGDTKSGRIARADVAEIAVRALLDPAAKNTVFECYDADTSKPLNAVGASNIMKKKTSTEEAAATSTGLERRADSWGGLFKGLKPD 362
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Match: B7G342_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G342_PHATC) HSP 1 Score: 258 bits (659), Expect = 4.060e-77 Identity = 141/264 (53.41%), Postives = 178/264 (67.42%), Query Frame = 3
Query: 423 VTVIGAGGKTGKECVEYLVARGTAATAVARSLTNSEGEPLKFTANDKVKLTTADVTVPSSLPEVVKGSSAVIFASSASKQGGSAKAVDYEGVVNVARACLEMKVPRLVVVSSGGVASPNSSVYKFLNLFGEIMSWKIRGEDELRSMYAAQGSSATCHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESIYSPAAED-CTLECYYKDTAKPLDTVGLSNMLRQTVKPEGAQVMGTERRGDTWEALFTGLKRD 1211
+ VIGA G+TG +CV+ V RG A +RS T + K V L DVT P+++ ++ AVIF +SASK GG+ VD +G+VNVARACL K+P LVVVSSG V PNS V++FLNLFG+IM KI+GEDE+R +Y+ G+ + YT++RPGGLT D PRGVTA+ELNQGDTKSGRIARADVA +C+E+ P T ECY DT KPL TVG+SN+L+Q P GTE G+T+E LFTGL+RD
Sbjct: 109 ICVIGANGRTGSQCVQACVERGIPVRATSRSGTYNGDSSSKL-----VALLPCDVTKPATISRAIERCQAVIFCASASKNGGTPSQVDNDGLVNVARACLAQKIPHLVVVSSGAVTKPNSPVFQFLNLFGKIMEEKIKGEDEVRRLYSMSGNQPSLVYTVIRPGGLTEDAPRGVTALELNQGDTKSGRIARADVAALCIEATRYPGLTGFATFECYDSDTGKPLSTVGISNILKQKAAPADF-TSGTEHVGETFEKLFTGLQRD 366
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Match: A0A7S1CTA4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CTA4_9STRA) HSP 1 Score: 250 bits (638), Expect = 4.400e-74 Identity = 141/270 (52.22%), Postives = 181/270 (67.04%), Query Frame = 3
Query: 423 VTVIGAGGKTGKECVEYLVARGTAATAVARSLTNSEGEPLKFTANDKVKLTTADVTVPSSLPEVVKGSSAVIFASSASKQGGSAKAVDYEGVVNVARACLEMKVPRLVVVSSGGVASPNSSVYKFLNLFGEIMSWKIRGEDELRSMYAAQGSSAT-----CHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESI-YSPAAEDCTLECYYKDTAKPLDTVGLSNMLRQTVKPEGAQVMGTERRGDTWEALFTGLKRDA 1214
+ VIG G+TG E V+YL+++ A +R T + A ++ DVT P S+ G+SAVIFA+SASK GG+ AVD G+VNVA+AC++ VP LVVVSSG V P+S VY+FLNLFG+IM K++GED +R +YA ++ YTI+RPGGLTLDPPRGV AIELNQGDTKSGR+ARADVA++CVES+ Y + T ECY DT PL TVGLSN+ ++ E V G ERRG+T+E LFTGL++DA
Sbjct: 95 ICVIGCNGRTGTEVVKYLISKNEPIKATSR--TGEYNDAASVPAGAMLEQLVCDVTNPKSVQLACAGTSAVIFAASASKSGGTPSAVDNAGLVNVAKACMDANVPHLVVVSSGAVTKPSSPVYQFLNLFGKIMEEKVKGEDAVRKLYAEHNANLREGGQKLTYTIIRPGGLTLDPPRGVAAIELNQGDTKSGRLARADVAQLCVESLNYPQLTGETTFECYDADTGAPLATVGLSNIAKKKTDGE-VFVSGFERRGNTYEELFTGLQKDA 361
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Match: A0A7S3Q5A4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5A4_9STRA) HSP 1 Score: 243 bits (619), Expect = 1.720e-71 Identity = 133/265 (50.19%), Postives = 183/265 (69.06%), Query Frame = 3
Query: 423 VTVIGAGGKTGKECVEYLVARGTAATAVARSLTNSEGEPLKFTANDKVKLTTADVTVPSSLPEVVKGSSAVIFASSASKQGGSAKAVDYEGVVNVARACLEMKVPRLVVVSSGGVASPNSSVYKFLNLFGEIMSWKIRGEDELRSMYAAQGSSATCHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVES-IYSPAAEDCTLECYYKDTAKPLDTVGLSNMLRQTVKPEGAQVM-GTERRGDTWEALFTGLKRD 1211
+ VIGA GKTG ECV+ ++RG A +R + GE +++ + DVT+ S++ +KGS AVIFA+SASK GG+A AVD G+ NVA +C+ +P LV+VSSG V P+S VYKFLNLFG IM+ KI+GED +R +Y + +S+ C YT++RPGGLT + RGV+A+ELNQGDTKSGRI+RADVA +C+E+ ++S + T ECY DT+KPL TVG+SN+++ K + M G ERRG+TW +F GL+ D
Sbjct: 86 ICVIGANGKTGSECVDACISRGINVRATSRGGVYT-GE---YSSEQFLSTAPCDVTISSTVDAAIKGSQAVIFAASASKAGGTAAAVDNIGLTNVASSCIRQGIPHLVIVSSGAVTKPSSPVYKFLNLFGNIMAEKIKGEDTVRELY--KDASSPCTYTVIRPGGLTQELARGVSALELNQGDTKSGRISRADVAALCIEATLHSKDSGSTTFECYDADTSKPLGTVGVSNIVKAKNKSDSEVFMSGKERRGETWGDIFVGLEND 344
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Match: A0A6H5KRR2_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRR2_9PHAE) HSP 1 Score: 227 bits (578), Expect = 1.290e-67 Identity = 126/199 (63.32%), Postives = 139/199 (69.85%), Query Frame = 3
Query: 693 GVVNVARACLEMKVPRLVVVSSGGVASPNSSVYKFLNLFGEIMSWKIRGEDELRSMYAAQGSSATCHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESIY-------------------------SPAAEDCTLECYYKDTAKPLDTVGLSNMLRQTVKPEGAQVMGTERRGDTWEALFTGLKRDA 1214
GVVNVA+ACLE KVPRLVVVSSGGVA+P+SS+YKFLNLFGE GED+ CHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESIY S AEDCT ECYYKDTAKPL VG+SN+L+Q + A+ GTE GD+W+ALF+GLKRDA
Sbjct: 8 GVVNVAKACLEAKVPRLVVVSSGGVATPDSSIYKFLNLFGE-------GEDQ-----------DVCHYTIVRPGGLTLDPPRGVTAIELNQGDTKSGRIARADVARVCVESIYRLPVVTPVLKPNCHEPLRLHVMSITSRNAEDCTFECYYKDTAKPLAAVGVSNILKQKTD-DTAKSFGTESTGDSWDALFSGLKRDA 187 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2876.7839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2876.7839.1 >prot_H-paniculata_contig2876.7839.1 ID=prot_H-paniculata_contig2876.7839.1|Name=mRNA_H-paniculata_contig2876.7839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=387bp MRSLSLVDIPLYLLLMTPTSAWTITTSAISAAASRTRTRTTQRHMNTVQIback to top mRNA from alignment at H-paniculata_contig2876:9037..19701+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2876.7839.1 ID=mRNA_H-paniculata_contig2876.7839.1|Name=mRNA_H-paniculata_contig2876.7839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10665bp|location=Sequence derived from alignment at H-paniculata_contig2876:9037..19701+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2876:9037..19701+ >mRNA_H-paniculata_contig2876.7839.1 ID=mRNA_H-paniculata_contig2876.7839.1|Name=mRNA_H-paniculata_contig2876.7839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2322bp|location=Sequence derived from alignment at H-paniculata_contig2876:9037..19701+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |