mRNA_H-paniculata_contig2875.7837.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2875.7837.1 vs. uniprot
Match: A0A6N7AQR0_9BACT (Chaperone protein DnaJ n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A6N7AQR0_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 1.200e-5 Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 2
Query: 1583 RQGLDLGGSVNITLEEAFTGKGIPVKLHRQVPCPACHGLGATKLATCDRC 1732
R+G D+ S+ ++LEEAFTG P+ L R++PC AC+G GA TCDRC
Sbjct: 117 RKGADMLMSIELSLEEAFTGVTRPITLTREIPCRACNGTGAEAYQTCDRC 166 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2875.7837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2875.7837.1 >prot_H-paniculata_contig2875.7837.1 ID=prot_H-paniculata_contig2875.7837.1|Name=mRNA_H-paniculata_contig2875.7837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp MKYASSFPSLLLVGAASSVDPRWGRNWAPALLAHAEPDDTSKDSAPAEETback to top mRNA from alignment at H-paniculata_contig2875:13128..18588+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2875.7837.1 ID=mRNA_H-paniculata_contig2875.7837.1|Name=mRNA_H-paniculata_contig2875.7837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5461bp|location=Sequence derived from alignment at H-paniculata_contig2875:13128..18588+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2875:13128..18588+ >mRNA_H-paniculata_contig2875.7837.1 ID=mRNA_H-paniculata_contig2875.7837.1|Name=mRNA_H-paniculata_contig2875.7837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at H-paniculata_contig2875:13128..18588+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |