mRNA_H-paniculata_contig11227.783.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Match: D8LIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN4_ECTSI) HSP 1 Score: 377 bits (969), Expect = 2.950e-124 Identity = 183/246 (74.39%), Postives = 217/246 (88.21%), Query Frame = 1 Query: 1 LLGCSTQMVNFWKPTLHLAQVDYTAVFQRNHIPSTFAGHITFHESTGNYHPIVYVNEFWLQKKHLLELNSTVETLPLELSISSMSMWKFQQTMSQLETQWAAQSKMGLSADGDEDTFRELLANTNPFVLAITMVVSLLHTLFNFLAFKNDIAFWKDKKRSLEGISVRGMLVNLFFQVVIFLYLVDNNTTYMVLVTNAIGLAIEASHWNVWKVGRFIVGKLNWGGQDGQPTRVIPTLTFRAKEVYRK 738 L G +M+N+WKPTL L Q+D+TA+FQRNHIPS+FAGHITF STGNYHP++YVNEFWLQ+KHLL LNSTVE++ LELSIS +S+WKFQ TMSQLE+QWAAQ+K+G++ DG++DTFRELLA TNP VL ITM+VSLLH++FNFLAFKNDI+FWKDKKRSLEGISVRGMLVNLFFQ VIFL L DN+TTYM+LVTNAIGLAIE VWKVGRF+VG+L+WGG+DGQP R +P + F+AKE YRK Sbjct: 289 LAGADREMINYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQ-TMSQLESQWAAQAKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLSLADNDTTYMILVTNAIGLAIE-----VWKVGRFMVGRLDWGGEDGQPRRWVPRMMFQAKESYRK 528
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Match: A0A836CN46_9STRA (Cleft lip and palate transmembrane protein 1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN46_9STRA) HSP 1 Score: 231 bits (590), Expect = 3.750e-68 Identity = 117/237 (49.37%), Postives = 166/237 (70.04%), Query Frame = 1 Query: 28 NFWKPTLHLAQVDYTAVFQRNHIPSTFAGHITFHESTGNYHPIVYVNEFWLQKKHLLELNSTVETLPLELSISSMSMWKFQQTMSQLETQWAAQSKMGLSADGDEDTFRELLANTNPFVLAITMVVSLLHTLFNFLAFKNDIAFWKDKKRSLEGISVRGMLVNLFFQVVIFLYLVDNNTTYMVLVTNAIGLAIEASHWNVWKVGRFIVGKLNWGGQDGQPTRVIPTLTFRAKEVYRK 738 NFWKPTL + VD TA FQRNHIP+ FA I FH +TGNY+PIV VNEFWLQ KH LN+T L +S + + K+Q MSQL QW +++MGL ++ + D+ ++L +T+P++L +T ++S LH++F+FLAFK+D++FW+ K+RSLEG+SVR M+VN FFQ+VI LYL DN T+Y++LV++A+GLAIE +WK+G+ K W P R++P++T A Y K Sbjct: 278 NFWKPTLAIQLVDMTADFQRNHIPAVFAEDIKFHAATGNYYPIVVVNEFWLQTKHYTALNATAPAAALAMSYRPVGLGKWQ-IMSQLARQWRTRARMGLQSESETDSIVDMLGDTSPWLLVLTFLISALHSIFDFLAFKSDVSFWR-KRRSLEGLSVRSMVVNCFFQIVITLYLFDNETSYLILVSSAVGLAIE-----LWKLGKAFSAKCEWA-----PGRLLPSITMTASASYAK 502
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Match: A0A0D2X1P3_CAPO3 (Transmembrane CLPTM1 family protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X1P3_CAPO3) HSP 1 Score: 187 bits (476), Expect = 7.970e-52 Identity = 95/236 (40.25%), Postives = 152/236 (64.41%), Query Frame = 1 Query: 25 VNFWKPTLHLAQVDYTAVFQRNHIPSTFAGHITFHESTGNYHPIVYVNEFWLQKKHLLELNSTVETLPLELSISSMSMWKFQQTMSQLETQWAAQSKMGLSADGDEDTFRELLANTNPFVLAITMVVSLLHTLFNFLAFKNDIAFWKDKKRSLEGISVRGMLVNLFFQVVIFLYLVDNNTTYMVLVTNAIGLAIEASHWNVWKVGRFIVGKLNWGGQDGQPTRVIPTLTFRAKEVY 732 +++W L + V+ + F RN +P ++TF E+TGNY PI+ N+FW+ + L +N T LPLE+S S S+WK+ + Q+E + Q G + D D F+ ++ +TNP++L +TMVVSLLH++F+FLAFKND+ FWK K+ S+ G+SVR + +N+ FQ +IFLYL+DN+T++++L+++ +GLAIE VWKV + + N + + +IP LT+ K+ Y Sbjct: 219 ISYWSNQLVIDLVEDQSAFNRNSVPPQIKDYLTFEETTGNYFPILDFNDFWMMRDDLYPINETTTELPLEISFSLQSLWKWT-LLIQMEQSFEMQHSWGQMGENDADNFKRMITDTNPYLLGLTMVVSLLHSVFDFLAFKNDVVFWK-KRDSMAGLSVRTIFMNIGFQFIIFLYLLDNDTSWLILISSGVGLAIE-----VWKVSKAV----NLVPSEDKIFSIIPRLTYTHKKSY 443
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Match: L8H030_ACACA (Transmembrane protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H030_ACACA) HSP 1 Score: 186 bits (472), Expect = 1.040e-51 Identity = 95/240 (39.58%), Postives = 155/240 (64.58%), Query Frame = 1 Query: 13 STQMVNFWKPTLHLAQVDYTAVFQRNHIPSTFAGHITFHESTGNYHPIVYVNEFWLQKKHLLELNSTVETLPLELSISSMSMWKFQQTMSQLETQWAAQSKMGLSADGDEDTFRELLANTNPFVLAITMVVSLLHTLFNFLAFKNDIAFWKDKKRSLEGISVRGMLVNLFFQVVIFLYLVDNNTTYMVLVTNAIGLAIEASHWNVWKVGRFIVGKLNWGGQDGQPTRVIPTLTFRAKEVY 732 S ++V+FWKP L L V V+ R IP ++F ++ G+YHP +++NEFW+ ++HL +N T LPL L +++SMWK+Q M Q++ + Q G +A+G+ D + +L TNP++L +T VS+LH++F+FLAFKNDI+FWK+KK +LEG+SVR + VN Q +I LYL DN+T++++L++ ++GL IEA WK+ + + + W P +P+++F+ + Y Sbjct: 196 SVELVSFWKPNLTLNMVHDFTVYPRGGIPPQMEELMSF-DAEGSYHPTLFINEFWIFREHLYPINDTTPELPLRLEYNTLSMWKWQM-MVQMQHSFKMQESWGSAAEGESDEIKRMLVETNPWLLVLTFAVSILHSVFDFLAFKNDISFWKEKK-NLEGLSVRTIFVNCITQFIILLYLFDNDTSWIILISASVGLLIEA-----WKITKAVEVIVQW------PNGGLPSISFKDRATY 421
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Match: A0A6P5GSI8_ANACO (cleft lip and palate transmembrane protein 1 homolog n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GSI8_ANACO) HSP 1 Score: 184 bits (466), Expect = 9.320e-51 Identity = 97/240 (40.42%), Postives = 150/240 (62.50%), Query Frame = 1 Query: 19 QMVNFWKPTLHLAQVDYTAVFQRNHIPSTFAGHITFHESTGNYHPIVYVNEFWLQKKHLLELNSTVETLPLELSISSMSMWKFQQTMSQLETQWAAQSKMGLSADGDEDTFRELLANTNPFVLAITMVVSLLHTLFNFLAFKNDIAFWKDKKRSLEGISVRGMLVNLFFQVVIFLYLVDNNTTYMVLVTNAIGLAIEASHWNVWKVGRFIVGKLNWGGQDGQPTRVIPTLTFRAKEVYRK 738 + V++WKP + + VD + N+IP T AGH+ TGNY+P VY NEFWL + L+ LN TV+ LPL L +S +SM K+Q + Q+E + G +G+ D + + NP++L +TMVVSLLH++F+FLAFKNDI FW +K +S+EG+S + ++V+ Q+V+FLYL+DN T++M+L ++ +G IE WK+G+ + +++ G+ IP L FR + Y K Sbjct: 206 EFVSYWKPNITINLVDDFTRYPHNNIPQTVAGHLNVDPITGNYYPTVYFNEFWLLRDKLIPLNETVKELPLNLELSPISMTKWQLFL-QIEQSFQVHRSYGSMLEGETDELKRVFLEGNPYLLVVTMVVSLLHSVFDFLAFKNDIQFW-NKNKSMEGLSAKSVVVSFICQLVVFLYLLDNETSWMILASSGVGCCIE-----FWKIGKAMHIEIDRSGK-------IPMLRFRDHDSYAK 431
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Match: S8C5G8_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C5G8_9LAMI) HSP 1 Score: 181 bits (458), Expect = 1.070e-49 Identity = 92/242 (38.02%), Postives = 154/242 (63.64%), Query Frame = 1 Query: 7 GCSTQMVNFWKPTLHLAQVDYTAVFQRNHIPSTFAGHITFHESTGNYHPIVYVNEFWLQKKHLLELNSTVETLPLELSISSMSMWKFQQTMSQLETQWAAQSKMGLSADGDEDTFRELLANTNPFVLAITMVVSLLHTLFNFLAFKNDIAFWKDKKRSLEGISVRGMLVNLFFQVVIFLYLVDNNTTYMVLVTNAIGLAIEASHWNVWKVGRFIVGKLNWGGQDGQPTRVIPTLTFRAKEVY 732 G + + +++WKP + + VD + + +N +P T +++ STGNY+P V+ NEFWL + L+ +N TV+ LPL+L + +SM K+Q + Q++ + G +G+ D + + NP++L +TMVVSLLH++F+FLAFKNDI FW +K +S+EG+S + ++VN F Q++IFLYL+DN T++M+L + IG+ IE WK+G+ + +++ G+ IP L FR ++ Y Sbjct: 198 GGAIEWISYWKPNITINLVDDFSRYPQNAVPPTVFPYLSIEPSTGNYYPTVFFNEFWLLRDKLIAINKTVKELPLDLEVGPISMTKWQMFL-QIDQSFQIHRNYGSMLEGEADQLKRVFLEGNPYLLGVTMVVSLLHSVFDFLAFKNDIQFW-NKNKSMEGLSAKSVVVNFFCQLIIFLYLLDNETSWMILASTGIGVCIE-----FWKIGKAMHIEIDRSGK-------IPKLRFRDRDSY 425
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Match: A0A068V1R3_COFCA (Uncharacterized protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068V1R3_COFCA) HSP 1 Score: 177 bits (448), Expect = 1.280e-49 Identity = 90/241 (37.34%), Postives = 151/241 (62.66%), Query Frame = 1 Query: 16 TQMVNFWKPTLHLAQVDYTAVFQRNHIPSTFAGHITFHESTGNYHPIVYVNEFWLQKKHLLELNSTVETLPLELSISSMSMWKFQQTMSQLETQWAAQSKMGLSADGDEDTFRELLANTNPFVLAITMVVSLLHTLFNFLAFKNDIAFWKDKKRSLEGISVRGMLVNLFFQVVIFLYLVDNNTTYMVLVTNAIGLAIEASHWNVWKVGRFIVGKLNWGGQDGQPTRVIPTLTFRAKEVYRK 738 T+ +++WKP + + VD +Q+N +P A ++ +TGNY+P V+ NEFWL + L+ +N TV LPL L + +SM K+Q + Q++ + G +G+ D + + NP++L +TM+VSLLH++F+FLAFKNDI FW +K +S+EG+S + ++V+ Q+++FLYL+DN+T++M+L ++ IG IE WK+G+ + +++ G+ IP L FR +E Y K Sbjct: 33 TEWISYWKPNITINLVDDFTRYQQNAVPPNIAPYLNIEPTTGNYYPTVFFNEFWLLRDKLIAINETVTELPLHLEVGPISMTKWQLFL-QIDQSFQIHRNYGSMLEGEADELKRVFLEGNPYLLVVTMIVSLLHSVFDFLAFKNDIQFW-NKNKSMEGLSAKSVVVSFVCQLIVFLYLLDNDTSWMILASSGIGCCIE-----FWKIGKAMHIEIDRSGK-------IPMLRFRDRESYAK 259
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Match: M1C5J2_SOLTU (Cleft lip and palate transmembrane protein n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1C5J2_SOLTU) HSP 1 Score: 177 bits (448), Expect = 1.300e-49 Identity = 90/238 (37.82%), Postives = 148/238 (62.18%), Query Frame = 1 Query: 19 QMVNFWKPTLHLAQVDYTAVFQRNHIPSTFAGHITFHESTGNYHPIVYVNEFWLQKKHLLELNSTVETLPLELSISSMSMWKFQQTMSQLETQWAAQSKMGLSADGDEDTFRELLANTNPFVLAITMVVSLLHTLFNFLAFKNDIAFWKDKKRSLEGISVRGMLVNLFFQVVIFLYLVDNNTTYMVLVTNAIGLAIEASHWNVWKVGRFIVGKLNWGGQDGQPTRVIPTLTFRAKEVY 732 + +++WKP + + VD + N IP A +I +TGNY+P V+ NEFWL + L+ +N TV +PL L +S +SM K+Q + Q++ + G DG+ D + + NP++L +TM+VS++H+LF+FLAFKNDI FW +K +S+EG+S + ++VN F Q ++FLYL+DN+T++M+L ++ +G IE WK+G+ + +++ G+ IP L FR +E Y Sbjct: 34 EWISYWKPNVTINLVDDFTRYTANAIPPIVAPYINIESTTGNYYPTVFFNEFWLLRDKLIAINDTVTEVPLHLEVSPISMTKWQLFL-QMDQSFQVHRSYGSMLDGESDELKRVFLEGNPYLLGVTMIVSVMHSLFDFLAFKNDIQFW-NKNKSMEGLSAKSVIVNFFCQFIVFLYLLDNDTSWMILASSGVGCCIE-----FWKIGKAMHIEIDRSGR-------IPMLRFRDRESY 257
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Match: D8RG86_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RG86_SELML) HSP 1 Score: 180 bits (456), Expect = 2.730e-49 Identity = 94/241 (39.00%), Postives = 151/241 (62.66%), Query Frame = 1 Query: 16 TQMVNFWKPTLHLAQVDYTAVFQRNHIPSTFAGHITFHESTGNYHPIVYVNEFWLQKKHLLELNSTVETLPLELSISSMSMWKFQQTMSQLETQWAAQSKMGLSADGDEDTFRELLANTNPFVLAITMVVSLLHTLFNFLAFKNDIAFWKDKKRSLEGISVRGMLVNLFFQVVIFLYLVDNNTTYMVLVTNAIGLAIEASHWNVWKVGRFIVGKLNWGGQDGQPTRVIPTLTFRAKEVYRK 738 T+ V+FWKP + + VD + RN +P T A ++ F E++GNY+P V+ NEFWL + L+ +N T L L L +S +S+ ++Q + Q++ + G +G+ D + + NP +LAITM VSLLHT+F+FLAFKNDI FW +K +S+EG+S R ++VN F Q+V+FLYL+DN T++M+++++ +G IE WK+G+ + +++ G+ P L FR ++ Y K Sbjct: 166 TEWVSFWKPNVTMNLVDDFTKYSRNALPPTVAEYLNFEETSGNYYPTVFFNEFWLLRDKLIRINETTTELTLNLDLSPISLTRWQLYL-QIDQSFQIHRSYGSMLEGEADELKRVFLEGNPILLAITMTVSLLHTVFDFLAFKNDIQFW-NKNKSMEGLSARSVVVNFFCQLVVFLYLLDNETSWMIILSSGVGCCIE-----FWKIGKAMHIEVDRSGR-------FPLLRFRDRDSYAK 392
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Match: A0A7S4RNP8_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNP8_9STRA) HSP 1 Score: 181 bits (458), Expect = 4.090e-49 Identity = 102/222 (45.95%), Postives = 146/222 (65.77%), Query Frame = 1 Query: 19 QMVNFWKPTLHLAQVDYTAVF-QRNHIPSTFAGHITFHESTGNYHPIVYVNEFWLQKKHLLELNSTVETLPLELSISSMSMWKFQQTMSQLETQWAAQSKMGLSADGDEDTFRELLANTNPFVLAITMVVSLLHTLFNFLAFKNDIAFWKDKKRSLEGISVRGMLVNLFFQVVIFLYLVDNNTTYMVLVTNAIGLAIEASHWNVWKVGR-----FIVGKLNW 666 Q++ + KP+L L V F QR IP F+ H+ ++ S Y+PI+Y +EFW+ HL+E+N T++ E+ I + MWK+Q MSQ+E WA Q KM D D FR +L TNP++LA+T +VS+LHT+F+ LAFKNDI+F++ KK S+EG+S+R M+VN FFQVVI LYL DN T +MVL++N +GL IE +WK+ + F GK++W Sbjct: 290 QLLLYAKPSLTLQIVPVELQFPQRQSIPPQFSMHMDWY-SDYEYYPILYNSEFWIMTDHLVEVNGTIDESVTEMRIEHVPMWKWQ-LMSQMEQTWANQEKMTGEEDSSNDMFRTMLMETNPYLLAVTAIVSVLHTVFDILAFKNDISFFRGKK-SMEGLSLRSMVVNTFFQVVILLYLADNETNFMVLMSNGVGLLIE-----IWKISKAVKISFEGGKIHW 503 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11227.783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11227.783.1 >prot_H-paniculata_contig11227.783.1 ID=prot_H-paniculata_contig11227.783.1|Name=mRNA_H-paniculata_contig11227.783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp MVNFWKPTLHLAQVDYTAVFQRNHIPSTFAGHITFHESTGNYHPIVYVNEback to top mRNA from alignment at H-paniculata_contig11227:4005..8113+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11227.783.1 ID=mRNA_H-paniculata_contig11227.783.1|Name=mRNA_H-paniculata_contig11227.783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4109bp|location=Sequence derived from alignment at H-paniculata_contig11227:4005..8113+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11227:4005..8113+ >mRNA_H-paniculata_contig11227.783.1 ID=mRNA_H-paniculata_contig11227.783.1|Name=mRNA_H-paniculata_contig11227.783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1434bp|location=Sequence derived from alignment at H-paniculata_contig11227:4005..8113+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |