mRNA_H-paniculata_contig2872.7827.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2872.7827.1
Unique NamemRNA_H-paniculata_contig2872.7827.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 6.970e-91
Identity = 154/364 (42.31%), Postives = 222/364 (60.99%), Query Frame = 1
Query:   37 LAIRYALALPPGKKRLPKGFGPELAKQFGVGDQYPRQLWAHVRDQLD----LSVRSASRSGRPSDFIPTKHATIRRVNAANRTLTLDRLSAKLAEVGLVAGSSTLQRWLKQIGSMRMKQRITPSLSPTHQKNRVDFILDQAAKNRTAFRSGFQTIHINEAWFYLTRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRPDCSCDFDDKIGIWRVC----AQRNSAQ-------------RERVH----------QNEFDVTIGAEWYQEWYKNSFLPALKEKMP*LEDEEVVTQQDEATPHTGKDTPRKLDELGKNGRGNANLVIQFAQSPDIDINDLGFFASLKRRVWRERYGTIDGLV 1035
            +A+  A+ + PG  R+PKG    + +++GVG +YP +LW  V+ Q+D    L + +  RSGRPS   P+K A ++ VN+ NR+ TL ++S +L ++GL  G  T++RW  ++G+ +   RI PSLS   +++R+DFI D+  +    +      +H++E+WFYL R++++VRVF G++  G  +V   SH+PK+M+I A +RPD + DFD KIGIWR+C    AQR+S +             RE  H          + EFD TI AEWY++WY +  LPA+KEKMP L  + VV QQD A+PHTGK  P  L+  G        LV Q AQSPD++INDLG FASLK RVW     +ID LV
Sbjct:    1 MAVEIAMGIQPGFSRIPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364          
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV)

HSP 1 Score: 149 bits (376), Expect = 2.040e-36
Identity = 127/434 (29.26%), Postives = 196/434 (45.16%), Query Frame = 1
Query:    1 KKCELSEEVRNTLAIRYALALPPGKKRLPKGFGPELAKQFGVGDQYPRQLWAHVRDQ------LDLSVRSASRSGRPSDFIPTKHATIRRVNAANRTLTLDRLSAKLAEVGLVAGSSTLQRWLKQIGSMRMKQR-ITPSLSPTHQKNRVDFILDQAAKNRT----AFRSGFQTIHINEAWFYLTRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRPDCSCD----FDDKIGIW----RVCAQRNSAQRER-VHQNEFDVTIGAEWYQEWYKNSFLPALKEKMP*LEDEEVVTQQDEATPHTGKDTPRKLDELGKNGRGNANLVIQFAQSPDIDINDLGFFASLKRRVWRERYGTIDGLVEGVKSMYDAYDAATLKRVWQSLFKRYNQVLKVLGGNDFEVQHTETKKRQRAGSLPKSVKIGREAFNAAV 1242
            KK  L   +R  + I    A    +  LP+G    L +++        ++W   R Q      ++++ R     GR   F  T    +RRV    RT      + +     L    ST+ R LK+ G +R     I P L+P H+  R+ F+L Q+          F   +  IHI+E WF++++   R  +   +E       Q  + I KVM + A++RP         +D KIGI+     V AQR SA R     + +   +I  E  +E   N  LPA++ K P    +E+  QQD A PH   +    L E  + G    N++ Q AQSPD++I DLGFF +++    +    T+D L++ V+  Y  Y+   +   W  L     ++LKV GGN+++  H   KK  R G LP +V+I  E  N  V
Sbjct:   72 KKPNLPNNIRRQIVIEM-FASASDELVLPRGLLTTLRQKYSCSRSTMNRIWTLARKQKIDGVEVNVASRKIGNCGRKVKF--TDDEALRRVPLKQRT------TIRSFATALEVSPSTVYRLLKR-GILRSHTNSIKPKLTPKHKVARMKFVLSQSIPKSMNELPKFNHLYNMIHIDEKWFFMSKITQRFYLL-SEEEDPYRACQSKAFITKVMFLAAIARPWLGPTGDILWDGKIGIFPFIDEVRAQRWSANRPAGTIEKKAKQSITKETIREMIINKLLPAIRAKWPENGCKEIWIQQDNARPHIQPNDAEFL-EACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVEISEELVNDTV 493          
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Match: UPI001C2688CA (uncharacterized protein LOC121745962 n=4 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2688CA)

HSP 1 Score: 144 bits (364), Expect = 3.720e-35
Identity = 110/407 (27.03%), Postives = 193/407 (47.42%), Query Frame = 1
Query:   82 LPKGFGPELAKQFGVGDQYPRQLWAHVRDQL----DLSVRSASRSGRPSDFIPTKHATIRRVNAANRTLTLDRLSAKLAEVGLVAGSSTLQRWLKQIGSMRMKQR-ITPSLSPTHQKNRVDFILDQAAKNRTA----FRSGFQTIHINEAWFYLTRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRPDCSCD----FDDKIGIW----RVCAQRNSAQRERVHQNEFDV-TIGAEWYQEWYKNSFLPALKEKMP*LEDEEVVTQQDEATPHTGKDTPRKLDELGKNGRGNANLVIQFAQSPDIDINDLGFFASLKRRVWRERYGTIDGLVEGVKSMYDAYDAATLKRVWQSLFKRYNQVLKVLGGNDFEVQHTETKKRQRAGSLPKSVKIGREAFNAAVEW 1248
            LP G   + A  FGV     R++WA   +Q+     +  +S  +  + +D +    A  R ++   RT T+ ++++KL         S +  W+KQ G +R     I   LS  ++  R+ + L Q   +       + S    +HI+E WFY+T+  DR  + P  E      +Q    I KVM +CAVS+P    +    FD K GI+    +V AQRNS  R R       + ++  E  ++   N  +PA+K K P    ++++ QQD A PH      ++  E       N  +V Q   SPD ++NDLGFF +++     +    +D L++ V + +D     TL  V+ +L     ++L+V GGN++++ H   ++ +  G LP  +++ ++    ++ +
Sbjct:   31 LPFGSKKKAATTFGVSYMTVRRIWAAAMEQVAKGEPIQFKSNKKGKQHADLLLIDEAKFRSLSVLERT-TIRKMASKLE-----VSKSLVGVWIKQ-GKLRPHTNAIKSQLSEANKIARMKWSLSQLRLDNNLDKMFYNSMQNVVHIDEKWFYMTKASDRYYLLPD-EIEPYRSIQSKRFINKVMFMCAVSKPHFDSNGELLFDGKYGIFPFTTQVAAQRNSKNRVRGTLETKPINSVNKEIMKDCIINQIVPAIKAKWPASSCKDIIIQQDNAKPHI-MPNDQEFKEAANTDGFNIKIVCQPPNSPDTNVNDLGFFRAIQSLQDDKSAKNVDDLLKNVVASFDELSPHTLDSVFLTLQSCLTEILRVKGGNNYKIPHMNKQRLRNLGLLPMFLEVDKDLIRDSLNY 428          
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU)

HSP 1 Score: 140 bits (354), Expect = 1.970e-33
Identity = 116/394 (29.44%), Postives = 185/394 (46.95%), Query Frame = 1
Query:   79 RLPKGFGPELAKQFGVGDQYPRQLWAHVRDQLDLSVRSAS-------RSGRPSDFIPTKHATIRRVNAANRTLTLDRLSAKLAEVGLVAGSSTLQRWLKQIGSMRMKQRITPSLSPTHQKNRVDFILDQAAKNRTAFRSGFQTIHINEAWFYLTRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRP----DCSCDFDDKIGIW----RVCAQRNSAQRERVHQNEFDV-TIGAEWYQEWYKNSFLPALKEKMP*L-EDEEVVTQQDEATPHTGKDTPRKLDELGKNGRGNANLVIQFAQSPDIDINDLGFFASLKRRVWRERYGTIDGLVEGVKSMYDAYDAATLKRVWQSLFKRYNQVLKVLGGNDFEVQHTETKKRQRAGSLPKSV 1209
            +LPKG   E A  FGV  +   ++W    + +D     A          GR S F   + A +++V+  +R+  L  LSA           +TL  ++K+   +R    + P L+  ++K RV+F L    K    F   + TIHI+E WFYL     +  +  G+    ST  +    I KVM +CAV+RP    D +  FD KIGIW    +  AQRNS  R R      ++ ++ A  YQ+      LPA++EK P   +   +  Q+D A PH  + +   + E  +    N  +  Q   SPD ++ DLGFFAS++   +++R   ID L+  V+          L  ++ SL     + +KV G N ++++H   +K  +  +LP S+
Sbjct:   98 KLPKGAFKESAALFGVTARTCSRVWKMYLETVDPETCPAGDVSTNRKNCGRKSTFAAVEEA-VKKVSYKDRS-DLRTLSAASG-----IARTTLGNYVKKGQILRHSGAVKPFLTEKNKKARVEFALS-LIKPDGKFEDMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCWKSRPIFIQEDNAKPHHLR-SRAAVREAAREAGWNITVTTQPPNSPDFNVLDLGFFASIQALQYKKRAKNIDQLIANVEEALVETSTIALNSIFLSLQCALEESIKVQGNNSYKLRHMGKEKLLKEDNLPVSI 481          
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Match: UPI000B8A6B46 (uncharacterized protein LOC110779611 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8A6B46)

HSP 1 Score: 139 bits (349), Expect = 1.970e-32
Identity = 119/437 (27.23%), Postives = 199/437 (45.54%), Query Frame = 1
Query:    1 KKCELSEEVRNTLAIRYALALPPGKKRLPKGFGPELAKQFGVGDQYPRQLWAHVRDQ-------LDLSVRSASRSGR-PSDFIPTKHATIRRVNAANRTLTLDRLSAKLAEVGLVAGSSTLQRWLKQIGSMRMKQRITPSLSPTHQKNRVDFILD----QAAKNRTAFRSGFQTIHINEAWFYLTRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRPDCSCD----FDDKIGIW----RVCAQRNSAQRER-VHQNEFDVTIGAEWYQEWYKNSFLPALKEKMP*LEDEEVVTQQDEATPHTGKDTPRKLDELGKNGRGNANLVIQFAQSPDIDINDLGFFASLKRRVWRERYGTIDGLVEGVKSMYDAYDAATLKRVWQSLFKRYNQVLKVLGGNDFEVQHTETKKRQRAGSLPKSVKIGREAFNAAVEW 1248
            K+ E   + R  LA R  L L     RLP G   +L  +F +      ++W +VR+Q       +D+  +   + GR P DF       + +++   RT      SA      L    S + + LK+         I P++S  H+  R+ +IL     +    ++ F S    +HI+E WF+++++  R  +  G+E      +Q  ++  KVM +  V+RP  +      +D KIGIW     V A R S  RER   + +   +I     +    +  LP ++ K P    + +  QQD A PH   + P  L+E  K G  + +L+ Q AQSPD+++ DLGFF  ++    ++    +  LV+ V   Y  YD  +L   W  L     ++LK  GGN+++  H   K+ +R   LP   +I +   + AV++
Sbjct:  124 KRHEQDNKGRTHLAQRL-LVLSRDWVRLPTGVSQQLQDEFDISRSTVSRMWKNVREQGKLGPDLIDVKNKKTGKVGRKPRDF---DTEIMLQISQKARTTIQSFASA------LECSPSMVYKLLKKGIIRSHTNSIKPTVSAAHKITRLKWILGLTLPRTVTQQSTFMSLSNFVHIDENWFFMSKNTQRYYLLAGEEEP-YRHIQSKNYTEKVMFLSGVARPIIASGGEVIWDGKIGIWAFTDEVAAIRTSKNRERGTIETKATPSITKNVIRRKMLDELLPTIRAKWPANACKTIWIQQDNARPHIFPNDPEFLEEANKYGF-DIHLICQPAQSPDLNVLDLGFFRGIQSLQHQKFPKNVTELVQSVHDAYMEYDPKSLNHTWLQLQYVMVEILKQKGGNNYKSPHQGKKRLERLRLLPTDTQIQQHIIDDAVDF 548          
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Match: UPI001C27372B (uncharacterized protein LOC121774291 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27372B)

HSP 1 Score: 135 bits (341), Expect = 5.470e-32
Identity = 116/432 (26.85%), Postives = 200/432 (46.30%), Query Frame = 1
Query:   10 ELSEEVRNTLAIRYALALPPGKKRLPKGFGPELAKQFGVGDQYPRQLWAHVRDQ------LDLSVRSASRSGRPSDFIPTKHATIRRVNAANRTLTLDRLSAKLAEVGLVAGSSTLQRWLKQIGSMRMKQRITPSLSPTHQKNRVDFILD----QAAKNRTAFRSGFQTIHINEAWFYLTRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRPDCSCD----FDDKIGIW----RVCAQRNSAQRER-VHQNEFDVTIGAEWYQEWYKNSFLPALKEKMP*LEDEEVVTQQDEATPHTGKDTPRKLDELGKNGRGNANLVIQFAQSPDIDINDLGFFASLKRRVWRERYGTIDGLVEGVKSMYDAYDAATLKRVWQSLFKRYNQVLKVLGGNDFEVQHTETKKRQRAGSLPKSVKIGREAFNAAVEW 1248
            E S E +N L +++ L      K  P+G   E  ++FG+  Q   + W   + Q      + L  R   +  +   F  T    ++ ++ + R+      + +   +GL    ST+ RW++          I P L+  ++  R+ F L+        N+  FR+   T+HI+E WFY+T+   R  + P +     T   +N +I K+M +CAV+RP  S +    FD KIGI+    +V A+RNS  R     + +   +I  E  ++   N  +PA+ EK P    + +  QQD A PH     P       +NG  N  +V Q   SPD ++NDLG+F +++    +    T+D LV+ V   +      TL  V+ SL     +++KV G N +++ H      +R+  LP+++++  E  N  + +
Sbjct:    5 EYSTEKKN-LVVQFILGKCVNGKP-PRGTIKEAHQKFGMSRQTISRYWNAAKQQQNTGNAIQLVNRKKVKHAKRIQFDVT---LLKSLHFSKRS------NIRSLAIGLGCSKSTVGRWVRAGLIRSHTSAIRPDLTAPNKLLRLTFTLEAIELDRMLNKILFRNMHNTVHIDEKWFYITKGSQRYYLAPEENEPHRTCKNKN-YISKIMFMCAVTRPLFSDNGEVLFDGKIGIFPFTEQVPAKRNSKNRYAGTLETKPIASITKEVTKQCIINKIIPAIMEKWPEGRSKFITIQQDNAKPHIANHDPDFRAAATQNGF-NIQIVQQPPNSPDTNVNDLGWFRAIQSLQLQTTCNTLDDLVKAVDMSFHDLCPVTLDNVFLSLQSCMLEIMKVKGQNCYKIPHMGKASLRRSAQLPENLQVPLELVNECISY 423          
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 135 bits (340), Expect = 6.680e-32
Identity = 116/423 (27.42%), Postives = 195/423 (46.10%), Query Frame = 1
Query:   40 AIRYALALPPGKKRLPKGFGPELAKQFGVGDQYPRQLWAHVRDQLD------LSVRSASRSGRPS---DFIPTKHATIRRVNAANRTLTLDRLSAKLAEVGLVAGSSTLQRWLKQIGSMRMKQRITPSLSPTHQKNRVDFILDQAAK----NRTAFRSGFQTIHINEAWFYLTRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRP--DCSCD--FDDKIGIWRVC----AQRNSAQRER-VHQNEFDVTIGAEWYQEWYKNSFLPALKEKMP*LEDEEVVTQQDEATPHTGKDTPRKLDELGKNGRGNANLVIQFAQSPDIDINDLGFFASLKRRVWRERYGTIDGLVEGVKSMYDAYDAATLKRVWQSLFKRYNQVLKVLGGNDFEVQHTETKKRQRAGSLPKSVKIGREAFNAAV 1242
            AI  AL        L +G   ++A QF V ++   ++W   + Q++      LS   A   GR     DF       +RR +         R  A L  V      ST+ R +K+         I P+L+  +++ R++F L + ++    N   F   F  IHI+E WFY+++   R  + PG++    T  Q    I KVM + AV+RP  D S +  F  KIGI+       A+R+S  R     + +  +++  E  + W     LP ++ K P      +  QQD A PH   +    L+   ++G  +  L  Q + SPD+++ DLGFF +++    +E  GTID LV  V++ ++   +  L  V+ +L     +++KV GGN++++ H    + +R G+LP  +       N A+
Sbjct:   20 AIYEALLQASFSGELQRGAISDVASQFSVSNRTVSRIWHQAKFQINHGLPVVLSSNMAKVVGRKRVQVDFNQVLDIPLRRRSNI-------RSLANLLNVS----KSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRT-CQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGF-DIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGNLPLRIGCDENLINEAL 429          
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Match: A0A328DNN2_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328DNN2_9ASTE)

HSP 1 Score: 134 bits (337), Expect = 7.930e-32
Identity = 95/332 (28.61%), Postives = 159/332 (47.89%), Query Frame = 1
Query:  286 RLSAKLAEVGLVAGSSTLQRWLKQIGSMRMKQRITPSLSPTHQKNRVDFILDQ----AAKNRTAFRSGFQTIHINEAWFYLTRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRP----DCSCDFDDKIGIW----RVCAQRNSAQRER-VHQNEFDVTIGAEWYQEWYKNSFLPALKEKMP*LEDEEVVTQQDEATPHTGKDTPRKLDELGKNGRGNANLVIQFAQSPDIDINDLGFFASLKRRVWRERYGTIDGLVEGVKSMYDAYDAATLKRVWQSLFKRYNQVLKVLGGNDFEVQHTETKKRQRAGSLPKSVKIGREAFNAAV 1242
            R + +     +    STL R ++Q         I P L+  ++  R+ F+L+Q    +  +   F+    TIH++E WF +++   RV     +ER      +  +HIPK+M +CA+ RP    +    +D K+GIW    +V AQR S  R     + +    I  E Y+       LP +KEK+P    + ++ QQD A PH   + P  +     +G     L  Q   S D++I DLGFFAS++    +     ++ LV+ V   Y   +A  L  VW S      +++KV GGN++++ H    + +R G+LP  +++  E + A+V
Sbjct:   36 RTNIRSLSAAIQVPKSTLHRCIQQGQLQSHTNAIKPFLTEENKLKRLAFVLNQFVPESLPHSPIFKDFSCTIHVDEKWFEMSKQSLRVYKTE-REREPHRTAKSKAHIPKLMHLCAIGRPIFGPEGEVIWDGKVGIWPLTIQVPAQRRSKNRAAGTLETKLIPRITKEVYRTLMIQQVLPTIKEKVPEAITKHIIIQQDNAKPHIDVNDPEFVQAANADGYS-IELTCQPPNSLDLNILDLGFFASIQSLQHQTSTRNVNELVQHVAQAYANLEAKKLNYVWISYQLAMTEIMKVQGGNNYKLAHIGKARLEREGALPNQLQVSTELYQASV 365          
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Match: UPI00053FDE92 (uncharacterized protein LOC104888825 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FDE92)

HSP 1 Score: 137 bits (344), Expect = 1.100e-31
Identity = 115/420 (27.38%), Postives = 194/420 (46.19%), Query Frame = 1
Query:   70 GKKRLPKGFGPELAKQFGVGDQYPRQLWAHVRDQL------DLSVRSASRSGR------PSDF--IPTKHATIRRVNAANRTLTLDRLSAKLAEVGLVAGSSTLQRWLKQIGSMRMKQRITPSLSPTHQKNRVDFILDQAAKNRTA----FRSGFQTIHINEAWFYLTRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRPDCS----CDFDDKIGIW----RVCAQRNSAQRER-VHQNEFDVTIGAEWYQEWYKNSFLPALKEKMP*LEDEEVVTQQDEATPHTGKDTPRKLDELGKNGRGNANLVIQFAQSPDIDINDLGFFASLKRRVWRERYGTIDGLVEGVKSMYDAYDAATLKRVWQSLFKRYNQVLKVLGGNDFEVQHTETKKRQRAGSLPKSVKIGREAFNAAVEW 1248
            G+  +P+G   ++A +         ++W +VR QL      D++ R   R GR      P     IP +  T  R  AA  TL + R              STL R +K+    +    I P L+P H+  RV + L     N       F + +  +H++E WF +++   R  + PG E     + +    I KVM I A++RP  +      FD KIGI+     V A+R+S  R+  V + +  ++I  +  +E +    LP+++EK P    +++   QD A PH   +  + + E  K+G  +  L+ Q AQSPD+++ DLGFF +++    +    ++  LV+ V   +D YD      +W +L +   + L V G N++ + H   K  +R G LP S+ I  +    + +W
Sbjct:  160 GRFTIPQGAIKKIAIELNTSRWTSGRIWKNVRQQLQENARIDVNHRKTGRVGRKRIQLDPQRLMAIPLRKRTTIRATAA--TLGIHR--------------STLHRLVKRGAIKKHTNAIKPHLTPAHKIARVLWCLGSIIPNTIQTIPKFSNMYNLVHVDEKWFCMSKISQRYYLAPG-EAEPYRRCKSKRFIVKVMFIAALARPHIAPSGEVSFDGKIGIFPFIEEVAAKRSSCNRDAGVLETKAQLSITKDVIREKFIKHILPSIREKWPEDGCKQIWIVQDNARPHIASNDEQFMLEAQKDGF-DIRLINQPAQSPDMNVLDLGFFNAIQTLKDQIAPRSVKQLVKAVNKAFDNYDPKLCNHIWLTLQQVMKETLIVKGNNNYHIPHMGKKSLERRGELPTSIVISPQLVEESRKW 561          
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Match: A0A485LSB2_9STRA (Aste57867_23454 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSB2_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.810e-30
Identity = 125/433 (28.87%), Postives = 190/433 (43.88%), Query Frame = 1
Query:   10 ELSEEVRNTLAIRYALALPPGK--KRLPKGFGPELAKQFGVGDQYPRQLWAHVRDQ--------LDLSVRSASRSGRPSDFIPTK-HATIRRVNAANRTLTLDRLSAKLAEVGLVAGSSTLQRWLKQIGSMRMKQRITPSLSPTHQKNRVDFILDQAAKNRTAFRSGFQTIHINEAWFYLTRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRP----DCSCDFDDKIGIWRVC----AQRNSAQRERVHQNEFDVTIGAEWYQEWYKNSFLPALKEKMP*LEDEEVVTQQDEATPH-TGKDTPR--KLDELGKNGRGNANLVIQFAQSPDIDINDLGFFASLKRRVWRERYGTIDGLVEGVKSMYDAYDAATLKRVWQSLFKRYNQVLKVLGGNDFEVQHTETKKRQRAGSLPKSVKIGREAFNAAV 1242
            EL+ E R  + +R AL    G   KR+P GFG  LA ++       R++  H R Q        + ++ +   R GRP    PT+  A ++ +  + RT     L A     G+  GS  L R+LK+         + P L+  ++ NRV F L                +H++E WFYLT++R    + PG+E     K +    I KVM + AV+RP    D    +D K+G W       A R+S  R         VT+  + Y+ +     +PA+    P     +++ Q D A  H T  D     K+ E  + G     L  Q   SPD+++ DLGFFASL+    RE   +ID L+  V   +  Y    L R + +L     + LKV G N +++ H    K+   G L ++V    +   AAV
Sbjct:    7 ELTNEEREAI-LREALMHSNGHFMKRMPNGFGQMLAAKYSCHVSCVRRILQHARVQGMGSGNMIVSVASKKKGRCGRPPSHAPTEVKAKLQELPLSQRT----NLRAVSFHSGISYGS--LHRYLKKGVFRSHSSALRPLLTDANKLNRVKFALSFIKPGGEVCEMN-NHVHLDEKWFYLTKERRTYYLIPGEEGP-DRKCKSKRFITKVMFLTAVARPRYVDDLGTWWDGKVGTWPFVQTANALRSSVNRPAGTPETKVVTVTKDVYRSYLVEKVMPAVVSSWP-GPPTQILLQHDNAKAHVTSSDAALQVKIHEYKQQG-WTFELAPQPPNSPDMNVLDLGFFASLQSLQHRESAKSIDQLIANVNRAFVDYPCERLDRTFVTLQSCMIETLKVGGNNAYKIPHMSKVKQATKGRLTRNVVCPEDVRAAAV 428          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2872.7827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE6.970e-9142.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
J3S7K7_BETVV2.040e-3629.26Mariner transposase n=2 Tax=Beta vulgaris subsp. v... [more]
UPI001C2688CA3.720e-3527.03uncharacterized protein LOC121745962 n=4 Tax=Salvi... [more]
I6THG9_PSEMU1.970e-3329.44Tranposase n=1 Tax=Pseudo-nitzschia multiseries Ta... [more]
UPI000B8A6B461.970e-3227.23uncharacterized protein LOC110779611 n=1 Tax=Spina... [more]
UPI001C27372B5.470e-3226.85uncharacterized protein LOC121774291 n=1 Tax=Salvi... [more]
UPI000CD873B36.680e-3227.42uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
A0A328DNN2_9ASTE7.930e-3228.61Uncharacterized protein n=1 Tax=Cuscuta australis ... [more]
UPI00053FDE921.100e-3127.38uncharacterized protein LOC104888825 n=1 Tax=Beta ... [more]
A0A485LSB2_9STRA4.810e-3028.87Aste57867_23454 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2872contigH-paniculata_contig2872:4002..5261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score75.5
Seed ortholog evalue2.4e-11
Seed eggNOG ortholog161934.XP_010675654.1
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMKC@1,2QQNW@2759,37TMG@33090,3GG9M@35493
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Exons2
Model size1248
Cds size444
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2872.7827.1prot_H-paniculata_contig2872.7827.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2872 4368..4823 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929873.5110807-UTR-H-paniculata_contig2872:4001..43671622929873.5110807-UTR-H-paniculata_contig2872:4001..4367Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2872 4002..4367 +
1691481049.2789125-UTR-H-paniculata_contig2872:4001..43671691481049.2789125-UTR-H-paniculata_contig2872:4001..4367Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2872 4002..4367 +
1622929873.5502486-UTR-H-paniculata_contig2872:4823..52611622929873.5502486-UTR-H-paniculata_contig2872:4823..5261Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2872 4824..5261 +
1691481049.3149123-UTR-H-paniculata_contig2872:4823..52611691481049.3149123-UTR-H-paniculata_contig2872:4823..5261Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2872 4824..5261 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929873.5253758-CDS-H-paniculata_contig2872:4367..46821622929873.5253758-CDS-H-paniculata_contig2872:4367..4682Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2872 4368..4682 +
1691481049.2900245-CDS-H-paniculata_contig2872:4367..46821691481049.2900245-CDS-H-paniculata_contig2872:4367..4682Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2872 4368..4682 +
1622929873.5377908-CDS-H-paniculata_contig2872:4694..48231622929873.5377908-CDS-H-paniculata_contig2872:4694..4823Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2872 4695..4823 +
1691481049.298951-CDS-H-paniculata_contig2872:4694..48231691481049.298951-CDS-H-paniculata_contig2872:4694..4823Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2872 4695..4823 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2872.7827.1

>prot_H-paniculata_contig2872.7827.1 ID=prot_H-paniculata_contig2872.7827.1|Name=mRNA_H-paniculata_contig2872.7827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
MRMKQRITPSLSPTHQKNRVDFILDQAAKNRTAFRSGFQTIHINEAWFYL
TRDRDRVRVFPGKERVGSTKVQRNSHIPKVMLICAVSRPDCSCDFDDKIG
IWRVCAQRNSAQRERVHQNEFDVTIGAEWYQEWYKNSFLPALKEKMP*
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mRNA from alignment at H-paniculata_contig2872:4002..5261+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2872.7827.1 ID=mRNA_H-paniculata_contig2872.7827.1|Name=mRNA_H-paniculata_contig2872.7827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1260bp|location=Sequence derived from alignment at H-paniculata_contig2872:4002..5261+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAAAGTGCGAGCTGAGCGAGGAAGTTCGAAACACGTTGGCCATACGGTA CGCTTTAGCGCTACCTCCCGGTAAGAAACGGCTCCCGAAAGGCTTTGGGC CAGAGTTGGCGAAGCAATTTGGAGTTGGCGACCAATATCCCAGACAACTT TGGGCGCATGTACGAGACCAACTGGACCTTTCGGTGCGGTCAGCATCACG AAGCGGGCGCCCGTCGGACTTCATACCGACAAAGCACGCCACGATTCGAA GGGTCAACGCCGCGAATCGAACCCTGACCCTGGATCGCCTGTCTGCCAAG CTAGCCGAAGTTGGTCTCGTAGCCGGCAGCTCAACGCTTCAGCGATGGCT CAAACAGATAGGTTCCATGAGGATGAAACAGCGCATTACCCCATCTCTGT CCCCGACGCACCAAAAGAACCGGGTAGACTTTATCCTCGACCAAGCAGCA AAGAACCGCACCGCTTTCAGAAGCGGCTTCCAAACAATTCACATCAACGA AGCGTGGTTTTATCTAACTCGCGACAGGGATCGCGTCCGTGTGTTCCCCG GGAAGGAAAGGGTGGGGTCCACCAAAGTACAGCGCAACAGCCATATTCCT AAGGTGATGCTCATCTGCGCCGTTTCACGTCCAGATTGTTCCTGCGATTT CGACGACAAGATTGGAATCTGGCGTGTTTGTGTCATCAAATAGGCGCAGA GGAACTCGGCCCAGCGTGAACGGGTGCACCAAAACGAGTTCGACGTGACC ATTGGCGCCGAGTGGTACCAGGAGTGGTACAAGAACTCTTTTCTCCCAGC ATTGAAGGAAAAGATGCCGTAGTTGGAGGATGAGGAAGTGGTCACGCAGC AGGATGAAGCGACCCCCCACACGGGGAAAGATACACCGCGGAAGCTCGAC GAACTCGGGAAGAACGGGAGGGGGAACGCCAATCTCGTAATTCAATTTGC GCAGTCACCGGATATCGACATCAACGATTTGGGATTCTTCGCATCTCTGA AAAGAAGGGTTTGGAGGGAGCGTTACGGTACGATAGACGGCCTTGTGGAG GGGGTAAAGAGCATGTACGATGCGTACGACGCGGCAACCTTAAAGAGGGT GTGGCAGAGCCTCTTTAAGCGGTACAATCAGGTGTTGAAGGTGCTAGGAG GTAACGATTTCGAGGTACAACACACCGAAACCAAGAAAAGGCAGCGTGCG GGAAGTCTGCCAAAATCGGTCAAAATCGGCCGAGAGGCTTTCAACGCGGC GGTAGAATGG
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Coding sequence (CDS) from alignment at H-paniculata_contig2872:4002..5261+

>mRNA_H-paniculata_contig2872.7827.1 ID=mRNA_H-paniculata_contig2872.7827.1|Name=mRNA_H-paniculata_contig2872.7827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig2872:4002..5261+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGGATGAAACAGCGCATTACCCCATCTCTGTCCCCGACGCACCAAAA
GAACCGGGTAGACTTTATCCTCGACCAAGCAGCAAAGAACCGCACCGCTT
TCAGAAGCGGCTTCCAAACAATTCACATCAACGAAGCGTGGTTTTATCTA
ACTCGCGACAGGGATCGCGTCCGTGTGTTCCCCGGGAAGGAAAGGGTGGG
GTCCACCAAAGTACAGCGCAACAGCCATATTCCTAAGGTGATGCTCATCT
GCGCCGTTTCACGTCCAGATTGTTCCTGCGATTTCGACGACAAGATTGGA
ATCTGGCGTGTTTGTATGAGGATGAAACAGCGCATTACCCCATCTCTGTC
CCCGACGCACCAAAAGAACCGGGTAGACTTTATCCTCGACCAAGCAGCAA
AGAACCGCACCGCTTTCAGAAGCGGCTTCCAAACAATTCACATCAACGAA
GCGTGGTTTTATCTAACTCGCGACAGGGATCGCGTCCGTGTGTTCCCCGG
GAAGGAAAGGGTGGGGTCCACCAAAGTACAGCGCAACAGCCATATTCCTA
AGGTGATGCTCATCTGCGCCGTTTCACGTCCAGATTGTTCCTGCGATTTC
GACGACAAGATTGGAATCTGGCGTGTTTGTGCGCAGAGGAACTCGGCCCA
GCGTGAACGGGTGCACCAAAACGAGTTCGACGTGACCATTGGCGCCGAGT
GGTACCAGGAGTGGTACAAGAACTCTTTTCTCCCAGCATTGAAGGAAAAG
ATGCCGTAGGCGCAGAGGAACTCGGCCCAGCGTGAACGGGTGCACCAAAA
CGAGTTCGACGTGACCATTGGCGCCGAGTGGTACCAGGAGTGGTACAAGA
ACTCTTTTCTCCCAGCATTGAAGGAAAAGATGCCGTAG
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