mRNA_H-paniculata_contig2870.7825.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Match: A0A6H5L6Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z5_9PHAE) HSP 1 Score: 273 bits (698), Expect = 1.130e-80 Identity = 182/434 (41.94%), Postives = 227/434 (52.30%), Query Frame = 1
Query: 1 SLSERGHALVKSTRAAMAGLTPAPDMVLCSPLTRTIQTAIGMFEGTGTRIVAISEVREAYGRFPCDRHKSKRNLQRLFGDSVDFSLCDDTDTTWTSDHREDMSHLNHRAARFVERVILRRWQGDGHIFVVSHGVFMEAAIRYITSNFSEHSKTRRVHNCEVHSFVFSMPTPSPTNTSILTNPSRQTLSTPTSDPSSSVGIAGAAAGGAGFDSSITIPLETAAPPLXXXXXXXXXXXXXXXTVAAGDSRNRSHPILGGVVTGGGIQSHRPLLQVYLSGQELALTCAVAMPLQTAAHVNRLFRHFQYSISARGGEEAAVAAAAKGGVGVASLDETQFTAFLTECGLCAEEARSLFLRLDRQRTREVFASEFLHAVTAFYPGGVAAAAGVGYDPRAA---GVMELRKRYQMEMQGTPLSNYEALERVFQRLLSAMLS 1293
SLS RGHALV+ R +M GL+PAP +VLCSPLTR +QTAI MF G+G IVA+ E REAYGRFPCDRH+ K L+ +FGDSVDFSLC DTTW+ HRE+MS L+ R A FV+ ++ R GH+FVVSHGVF+EAA+R + + H RVHNC+VHSFVFS+ PSS+ XXXX LG V + P ++ YL+GQ LAL CA MPL AHVNR R F G GV SL E QF+A L C + A+E R L+ LDR+ +V A + L A+ AF+ G A GV P G+M+LR RYQ EM GTPL+NYE L+ F+R+L +L+
Sbjct: 102 SLSSRGHALVRRARQSMLGLSPAPSVVLCSPLTRAVQTAIAMFGGSGIPIVAVPEAREAYGRFPCDRHRDKSELELMFGDSVDFSLCPVQDTTWSPHHREEMSQLDRRVAGFVDDLLRRE---AGHVFVVSHGVFIEAALRQLAHGYPGHIGKNRVHNCDVHSFVFSVA------------------------PSSAAXX------------------------------------XXXXXXXXXXXXXXXXXGLGRVPLAAATSTAPPRVEAYLTGQGLALACAARMPLPAVAHVNRTIRCFS-------------------GDGV-SLTERQFSALLARCEIGAQETRWLYCALDREGGGKVAAGDLLQALVAFH-SGEEEAGGVAEPPGTHAHHGLMDLRVRYQREMYGTPLANYELLDSTFKRILFTVLA 451
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Match: D8LRC2_ECTSI (Catalytic, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC2_ECTSI) HSP 1 Score: 246 bits (628), Expect = 8.380e-72 Identity = 178/419 (42.48%), Postives = 223/419 (53.22%), Query Frame = 1
Query: 49 MAGLTPAPDMVLCSPLTRTIQTAIGMFEGTGTRIVAISEVREAYGRFPCDRHKSKRNLQRLFGDSVDFSLCDDTDTTWTSDHREDMSHLNHRAARFVERVILRRWQGDGHIFVVSHGVFMEAAIRYITSNFSEHSKTRRVHNCEVHSFVFSMPTPSPTNTSILTNPSRQTLSTPTSDPSSSVGIAGAAAGGAGFDSSITIPLETAAPPLXXXXXXXXXXXXXXXTVAAGDSRNRSHPILGGVVTGGGIQSHRPLLQVYLSGQELALTCAVAMPLQTAAHVNRLFRHFQYSISARGGEEAAVAAAAKGGVGVASLDETQFTAFLTECGLCAEEARSLFLRLDRQRTREVFASEFLHAVTAFYPGGVAAAAGVGYDPRAA----GVMELRKRYQMEMQGTPLSNYEALERVFQRLLSAMLS 1293
M GL+PAP +VLCSPLTR +QTAI MF G+G IVA+ E REAYGRFPCDRH+ + L+ +FGDSVDFSLC DT W+ HRE+MS L+ R A FV+ ++ R GH+FVVSHGVF+EA +R + + H RVHNC+VHSFVFS+ PSS XXXXXXXXXXXXXXX + P P ++ YL+GQ LAL CA MPL AHVNR R F G G+ SL E QF+A L C + A+E R L+ LDR+ +V A + L A+ AF+ GG A G +P A G+M+LR RYQ EM GTPL+NYE L+ F+R+L +L+
Sbjct: 1 MLGLSPAPSVVLCSPLTRAVQTAIAMFGGSGIPIVAVPEAREAYGRFPCDRHRDRSELELMFGDSVDFSLCAVQDTAWSPHHREEMSQLDRRVAGFVDGLLRRE---AGHVFVVSHGVFIEATLRQLAHGYPGHIGKNRVHNCDVHSFVFSVA------------------------PSSXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTAP---------------PRVEAYLTGQGLALACAARMPLPAVAHVNRTIRRFS-------------------GDGL-SLTERQFSALLARCEIGAQETRWLYCALDREGGGKVAAGDLLQALVAFHSGGEEA--GSVAEPPGAHARHGLMDLRVRYQREMYGTPLANYELLDATFKRILFTVLA 344
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Match: A0A5C7H7B2_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7H7B2_9ROSI) HSP 1 Score: 80.5 bits (197), Expect = 3.730e-13 Identity = 55/165 (33.33%), Postives = 83/165 (50.30%), Query Frame = 1
Query: 55 GLTPAPDMVLCSPLTRTIQTAIGMF----------EGTGTR-------IVAISEVREAYGRFPCDRHKSKRNLQRLFGDSVDFSLC-DDTDTTWTSDHREDMSHLNHRAARFVERVILRRWQGDGHIFVVSHGVFMEAAIRYITSNFSEHSKTRRVHNCEVHSFV 495
GL D+V+ SP++RT+QTA+G+F E G + IVA+ RE G PCD+ S Q F ++DF L + D W +D RE M + R +F+E + R+ + I VVSHG+F++ + + ++ S T R NCE+ S V
Sbjct: 65 GLAKKIDLVITSPMSRTLQTAVGVFGSEGHSMTVKEENGAKSTLNSPPIVAVELCRERMGLHPCDKRGSISEYQSNFP-AIDFKLAKSEDDILWKADTRETMKEVTDRGKKFIEWLWTRQ---EKEIAVVSHGIFLQEILHTLVNDPS--MNTTRFQNCEIRSVV 223
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Match: UPI0012639E85 (phosphoglycerate mutase-like protein 1 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI0012639E85) HSP 1 Score: 78.6 bits (192), Expect = 1.830e-12 Identity = 55/192 (28.65%), Postives = 95/192 (49.48%), Query Frame = 1
Query: 4 LSERGHALVKSTRAAMA--GLTPAPDMVLCSPLTRTIQTAIGMFEGT--------------------GTRIVAISEVREAYGRFPCDRHKSKRNLQRLFGDSVDFSLCD-DTDTTWTSDHREDMSHLNHRAARFVERVILRRWQGDGHIFVVSHGVFMEAAIRYITS--NFSEHSKTRRVHNCEVHSFVFSM 504
LS+ G V+ R + GLT D+V+ SP+ RT+QTA+G+F G G I+A+ + RE +G PC+R +S Q LF ++DF L + + D W ++ RE + R +F++ + R+ + I +VSHG+F++ ++ + N S + R NCE+ + ++
Sbjct: 46 LSDLGFKQVEKLRKEVEDKGLTKKIDLVIASPMLRTLQTAVGVFGGKSQANRFDVHTSTAGNCAKFDGPPIIAVEQCRERWGLEPCNRRRSISEYQNLFP-AIDFQLIESEDDILWKAEVRESYEEVAARGMKFLKWLWTRQ---EKEIAIVSHGIFLQQTLKKLVKEKNQSMENLCSRFGNCEIRTVAINI 233
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Match: UPI001CFADDE8 (phosphoglycerate mutase-like protein 1 n=2 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFADDE8) HSP 1 Score: 77.8 bits (190), Expect = 4.850e-12 Identity = 51/176 (28.98%), Postives = 87/176 (49.43%), Query Frame = 1
Query: 58 LTPAPDMVLCSPLTRTIQTAIGMFEGTGTR------------------------IVAISEVREAYGRFPCDRHKSKRNLQRLFGDSVDFSLCD-DTDTTWTSDHREDMSHLNHRAARFVERVILRRWQGDGHIFVVSHGVFMEAAIRYIT--SNFSEHSKTRRVHNCEVHSFVFSM 504
LT D+V+ SP+ RT+QTA+G+F G G+R I+A+ RE +G PC+R +S Q LF +DF L + + D W +D RE + R +F++ + R+ + I +VSHG+F++ ++ + +N S + R NCE+ + ++
Sbjct: 86 LTKKIDLVIASPMLRTLQTAVGVFGGGGSRANGFDVDGETAVNGDKFAKIDGPPIIAVEHCRERWGLEPCNRRRSIHEYQTLFP-GIDFQLIESEDDILWKADVRESYEEVAARGIKFLKWLWTRQ---EKEIAIVSHGIFLQQTLQKLAKETNQSMENLCSRFGNCEIRTVAINI 257
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Match: A0A382CR29_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382CR29_9ZZZZ) HSP 1 Score: 75.1 bits (183), Expect = 8.380e-12 Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 73 DMVLCSPLTRTIQTAIGMFEGTGTRIVAISEVRE-AYGRFPCDRHKSKRNLQRLFGDSVDFSLCDDTDTTWTSDHREDMSHLNHRAARFVERVILRRWQGDGHIFVVSHGVFMEAAI 420
D+V SPLTRT+QTA +F GT +I+AI ++ E G C++ K K L LF +VDFSL D+ W D +E +S L R F + R + + +I +VSH F++ +
Sbjct: 57 DIVFVSPLTRTLQTATNIFNGTDKKIIAIEDILEFPQGMHYCNKRKKKSELINLFP-NVDFSLIDENPKYWQDDIQETVSELQKRIQTFF---VFTRKRDEKNICIVSHSSFLKVLL 169
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Match: UPI001CFA04BE (phosphoglycerate mutase-like protein 1 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA04BE) HSP 1 Score: 75.9 bits (185), Expect = 1.840e-11 Identity = 51/173 (29.48%), Postives = 85/173 (49.13%), Query Frame = 1
Query: 55 GLTPAPDMVLCSPLTRTIQTAIGMFEGT--------------------GTRIVAISEVREAYGRFPCDRHKSKRNLQRLFGDSVDFSLCD-DTDTTWTSDHREDMSHLNHRAARFVERVILRRWQGDGHIFVVSHGVFMEAAIRYITS--NFSEHSKTRRVHNCEVHSFVFSM 504
GL+ D+V+ SP++RT+QTA+G+F G G I+A+ RE G PC+R +S Q LF ++DF L + + D W +D RE + R +F++ + R+ + I VVSHG+F++ + + N S + R NCE+ + ++
Sbjct: 79 GLSKIIDLVITSPMSRTLQTAVGVFGGECQANGLDGQATPAGNGAKFDGPPIIAVEHCRERLGLEPCNRRRSINEYQTLFP-TIDFQLIESEDDILWKADVRESYEEVAERGMKFLKWLWTRQ---EKEIAVVSHGIFLQQTLINLVKEKNPSMENLCSRFDNCEIRTVAINI 247
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Match: A0A087HME1_ARAAL (Uncharacterized protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HME1_ARAAL) HSP 1 Score: 74.7 bits (182), Expect = 3.820e-11 Identity = 51/161 (31.68%), Postives = 80/161 (49.69%), Query Frame = 1
Query: 55 GLTPAPDMVLCSPLTRTIQTAIGMFEG--------------TGTRIVAISEVREAYGRFPCDRHKSKRNLQRLFGDSVDFSLCD-DTDTTWTSDHREDMSHLNHRAARFVERVILRRWQG-DGHIFVVSHGVFMEAAIRYITSNFSEHSKTR--RVHNCEV 483
GL ++V+ SPL RT+QT+ G+F G IVA+ RE G +PCDR +S + F + +DF++ + D D W +D RE+M + R F++ + W+ + I VVSHG+F++ +R + N T R NCE+
Sbjct: 69 GLLNTIELVVTSPLRRTMQTSTGIFRGQEDLNQSEVFPIANNSPPIVALEICRERMGLYPCDRRESINTHRSCFSE-IDFTMIESDEDALWQADERENMEDVAARGLHFIKWL----WERPEKEIAVVSHGIFLQQTLRALHENGKPLKDTHLTRFANCEL 224
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Match: A0A067GRI7_CITSI (Uncharacterized protein n=12 Tax=Citrus TaxID=2706 RepID=A0A067GRI7_CITSI) HSP 1 Score: 75.9 bits (185), Expect = 4.360e-11 Identity = 53/177 (29.94%), Postives = 82/177 (46.33%), Query Frame = 1
Query: 40 RAAMAGLTPAPDMVLCSPLTRTIQTAIGMFEGTGTR---------------------IVAISEVREAYGRFPCDRHKSKRNLQRLFGDSVDFSLCD-DTDTTWTSDHREDMSHLNHRAARFVERVILRRWQGDGHIFVVSHGVFMEAAIRYITSNFSEHSKTR---RVHNCEVHSFV 495
R +GLT D+V+ SPL RT+QTA+G+F G G I+A+ RE G PCD+ +S LF ++DF L + + D W +D RE + R F++ + R+ + I VVSHG+F++ + + ++ R NCE+ S V
Sbjct: 132 RVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFP-AIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQ---EKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVV 304
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Match: A0A1R3GHH2_9ROSI (Histidine phosphatase superfamily, clade-1 n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3GHH2_9ROSI) HSP 1 Score: 74.7 bits (182), Expect = 6.480e-11 Identity = 61/196 (31.12%), Postives = 91/196 (46.43%), Query Frame = 1
Query: 4 LSERGHALVKSTRAAMA--GLTPAPDMVLCSPLTRTIQTAIGMFEGTGT----------------------RIVAISEVREAYGRFPCDRHKSKRNLQRLFGDSVDFSLCDDTDTT-WTSDHREDMSHLNHRAARFVERVILRRWQGDGHIFVVSHGVFME-AAIRYITSN----FSEHSKTRRVHNCEVHSFVFS 501
LS G V+ R A+ GL ++V+ SPL+RT+QTA+G+F G I+ RE G++ CD+ +S + F +VDFSL +D D WT+D RE + R F++ + R+ + I +VSHGVF++ I I SN F + R NCE+ S + S
Sbjct: 49 LSSLGWEQVRDQRKAVCENGLLERIEVVITSPLSRTLQTAVGIFHGEEVVADEFGKVDVKKDETLTFNNRPPIIVNERCRERLGKYECDKRRSISQYRSRFP-AVDFSLIEDEDDILWTADERESHEEVTVRGMDFMKWLWGRK---EKEIALVSHGVFLQDVMIELINSNKCLPFMKGDPFSRFENCEIRSMIIS 240 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2870.7825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2870.7825.1 >prot_H-paniculata_contig2870.7825.1 ID=prot_H-paniculata_contig2870.7825.1|Name=mRNA_H-paniculata_contig2870.7825.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=419bp MAGLTPAPDMVLCSPLTRTIQTAIGMFEGTGTRIVAISEVREAYGRFPCDback to top mRNA from alignment at H-paniculata_contig2870:5559..15136- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2870.7825.1 ID=mRNA_H-paniculata_contig2870.7825.1|Name=mRNA_H-paniculata_contig2870.7825.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9578bp|location=Sequence derived from alignment at H-paniculata_contig2870:5559..15136- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2870:5559..15136- >mRNA_H-paniculata_contig2870.7825.1 ID=mRNA_H-paniculata_contig2870.7825.1|Name=mRNA_H-paniculata_contig2870.7825.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2514bp|location=Sequence derived from alignment at H-paniculata_contig2870:5559..15136- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |