prot_H-paniculata_contig2869.7820.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2869.7820.1
Unique Nameprot_H-paniculata_contig2869.7820.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length240
Homology
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 142 bits (357), Expect = 6.490e-35
Identity = 88/247 (35.63%), Postives = 126/247 (51.01%), Query Frame = 0
Query:    1 MKGLGSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGLTSVEGRPKPIGAVLSGIDAGIQERSSRRSGNSTEYRGMVGSLMYASTGTRPDIACAVHQAARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDADWAEDVE----------------------KQQLVTWFSTEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLLEDNKSAINLSKGSGAHCRTMHIECA 225
            ++ LG +S +LG+ ++RDR S T++I Q  Y+  VL R+ +       KP+   L       +     R  N  EY+ ++G L Y +T TRPD+A AV   ++ M  P +E +   K I RY+   L+ G TF  K     L G+ DADWA D E                      KQ  V+  STEA Y+A   A +EA++LR LL +IG   + ST + EDN++AI LS+    H RT HI+ A
Sbjct: 1061 VEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEEC----KPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTVMCEDNQAAIQLSRNPKFHNRTKHIDVA 1303          
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4)

HSP 1 Score: 141 bits (355), Expect = 8.380e-35
Identity = 90/245 (36.73%), Postives = 121/245 (49.39%), Query Frame = 0
Query:    1 MKGLGSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGLTSVEGRPKPIGAVLSGIDAGIQERS-SRRSGNSTEYRGMVGSLMYASTGTRPDIACAVHQAARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDADWAEDVEKQQLVTWF----------------------STEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLLEDNKSAINLSKGSGAHCRTMHI 222
            M  LG    +LG+E+ RDRPS T+SI Q  Y  E+L R+G++  +  P P       ++ G+  R  S    +S  Y+  VGSLMY   GT PD+A +V   ++    P  E     K + RY+    DLG  F G  N   +E FIDADWA+D   +  +T +                      STEA Y+AA  A KEA++LR  +  +GF     T L  DN+SAI L K S  H RT HI
Sbjct:  425 MTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTP-------MEVGVSLRKLSEAEVDSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTK-IEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHI 661          
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Match: A0A034V8I0_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034V8I0_BACDO)

HSP 1 Score: 137 bits (345), Expect = 9.770e-34
Identity = 89/241 (36.93%), Postives = 124/241 (51.45%), Query Frame = 0
Query:    5 GSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGLTSVEGRPKPIGAVLSGIDAGIQERSSRRSGNSTEYRGMVGSLMYASTGTRPDIACAVHQAARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDADWAEDV----------------------EKQQLVTWFSTEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLLEDNKSAINLSKGSGAHCRTMHIE 223
            G L   LGI+V R+   G I I Q  YI+++L R+G+T       P+ A   G   G +  + +R    +EY+ ++G LMY S  TRPDI  +V + A+R  DP  E  +  KHI RYL++  DL   +   + G  ++GF+DADW  D+                      +KQQ V   STEA YVA  E  KEA++LR LL  IG   +  T +  DN SA +LSK    H R+ HI+
Sbjct:  329 GQLRYFLGIKVERNGELGAIHISQSQYIKDILQRHGMTQCRTAATPLDA---GFTIGCKNTTCKRV-EISEYQSLIGELMYLSVCTRPDIMHSVSKLAQRNADPHTEHVAGVKHILRYLASTADLKLRYS--ACGKPVQGFVDADWGNDMMDRKSFSGYAFVLSGSAITWQSKKQQTVALSSTEAEYVALAEGVKEALFLRNLLNEIGCEQQEPTIIYGDNLSAQHLSKNQMFHGRSKHID 563          
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY)

HSP 1 Score: 135 bits (341), Expect = 9.850e-34
Identity = 90/245 (36.73%), Postives = 128/245 (52.24%), Query Frame = 0
Query:    4 LGSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGLTSVEGRPKPIGAVL----SGIDAGIQERSSRRSGNSTEYRGMVGSLMYASTGTRPDIACAVHQAARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDADWAEDV---------------------EKQQLVTWFSTEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLLEDNKSAINLSKGSGAHCRTMHIE 223
            LG +S +LGI+V RDR + T+S+ Q  YI  +L R+  T ++    P+   L    S     + + +  R      YR  +GSLMYA+ GTRPDI+ A+   A+  ++P    +   K +FRYL    +L   +GG   G  LEG++DAD A                        +KQ+LVT  +TEA YVAA  A KEA+++R LLG +     G TTL  D++SAI L+K    H RT HI+
Sbjct:  174 LGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRK---IPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRG--LEGYVDADGASQEHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRRLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHID 413          
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Match: A0A1J3I7B7_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I7B7_NOCCA)

HSP 1 Score: 134 bits (337), Expect = 1.130e-33
Identity = 87/245 (35.51%), Postives = 127/245 (51.84%), Query Frame = 0
Query:    1 MKGLGSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGLTSVEGRPKPIGAVLSGIDAGIQERSSRRSG-NSTEYRGMVGSLMYASTGTRPDIACAVHQAARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDADWAEDVEKQQLVTWF----------------------STEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLLEDNKSAINLSKGSGAHCRTMHI 222
            MK LG  SR+LG+++ RDR  GT+ + Q+ YI +VL  +G+T  +    P+            ER         T Y   VGSLMYA  G+RPD+A AV   +R M +P R+ ++  K + RYL        TF  K+    +EGF D+D+A D++K++ VT F                      +TEA Y+A   A KEA++L+ L   +GFG  G+  +  D++SA+ L+K S  H RT HI
Sbjct:   96 MKDLGKASRILGMDIIRDREKGTLKLSQENYIEKVLKAFGMTEAKPTITPLATHFRLKSLTKDERKEEAIHMEGTPYASAVGSLMYAMIGSRPDLAFAVGVISRFMSNPGRDHWTAVKWVLRYLRGASQDCLTFT-KNKDFSIEGFCDSDYATDLDKRRSVTGFIFKVWGNTVSWRSNLQSVVALSTTEAEYMALSSAVKEAIWLKSLCEELGFGA-GAVKIHCDSQSALALAKNSVHHERTKHI 338          
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY)

HSP 1 Score: 136 bits (343), Expect = 4.880e-33
Identity = 90/245 (36.73%), Postives = 129/245 (52.65%), Query Frame = 0
Query:    4 LGSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGLTSVEGRPKPIGAVL----SGIDAGIQERSSRRSGNSTEYRGMVGSLMYASTGTRPDIACAVHQAARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDADWAEDV---------------------EKQQLVTWFSTEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLLEDNKSAINLSKGSGAHCRTMHIE 223
            LG +S +LGI+V RDR + T+S+ Q  YI  +L R+  T ++    P+   L    S     + + +  R      YR  +GSLMYA+ GTRPDI+ A+   A+  ++P    +   K +FRYL    +L   +GG   G  LEG++DAD A                        +KQ+LVT  +TEA YVAA  A KEA+++R+LLG +     G TTL  D++SAI L+K    H RT HI+
Sbjct: 1191 LGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRK---IPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRG--LEGYVDADGASQEHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRQLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHID 1430          
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Match: A0A1J3DQ82_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DQ82_NOCCA)

HSP 1 Score: 129 bits (325), Expect = 1.490e-32
Identity = 83/245 (33.88%), Postives = 126/245 (51.43%), Query Frame = 0
Query:    1 MKGLGSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGLTSVEGRPKPIGAVLSGIDAGIQERSSRRSG-NSTEYRGMVGSLMYASTGTRPDIACAVHQAARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDADWAEDVEKQQLVTWF----------------------STEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLLEDNKSAINLSKGSGAHCRTMHI 222
            MK +G  SR+LG+++ RDR  GT+ + Q+ YI +VL  +G+T  +    P+            ER    +   +T     VGSLMYA  G+RPDIA AV   +R M +P R+ ++  K + RYL        TF  K     ++GF D+D+A D+++++ VT F                      +TEA Y+A   A KEA++L+ L   +GF   G+  +  D++SA+ L+K S  H RT HI
Sbjct:   25 MKDMGKASRILGMDIIRDREKGTLQLSQESYIEKVLKTFGMTEAKPTSTPLATHFRLKSLSKDERKEEAAHMENTPNASAVGSLMYAMIGSRPDIAYAVGVISRFMSNPGRDHWTAVKWVLRYLRGSSKASLTFT-KDKSFSIDGFCDSDYATDLDRRRSVTGFIFQVWGNTVSWRSNLQSVVALSTTEAEYMALSIAVKEAIWLKGLCSELGFDA-GAVKIYCDSQSALALAKNSVYHERTKHI 267          
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Match: Q94FM1_CITPA (Pol polyprotein n=1 Tax=Citrus paradisi TaxID=37656 RepID=Q94FM1_CITPA)

HSP 1 Score: 129 bits (323), Expect = 2.070e-32
Identity = 87/248 (35.08%), Postives = 133/248 (53.63%), Query Frame = 0
Query:    1 MKGLGSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGL---TSVEGRPKPIGAVLSGIDAGIQERSSRRSGNSTEYRGMVGSLMYASTGTRPDIACAVHQAARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDADWAEDVEKQQL------------VTWFS----------TEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLLEDNKSAINLSKGSGAHCRTMHIE 223
            MKGLG   R+LG+++RRD+ + ++ + Q  Y+++VL R+G+   T +   P  +   LS      + +  R       Y  +VGSL+YA   TRPDI+ AV   +R M +P +  +   K I RYL   +D+G  F  K+ G    G+ D+D+A D++KQ+             V+W S          TEA Y+AA EA KEA++L+ LLG +G   + +  +  DN+SAI L+K    H RT HI+
Sbjct:    1 MKGLGDAQRILGMKIRRDKKNESVWLTQKSYLKKVLERFGMDDKTKLVCTPLALHFKLSSSSC-PRSQEERDYMACVPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFK-KNCGQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGV-IQENIAVFCDNQSAIFLAKNQTYHARTKHID 245          
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Match: A0A8H5HIA4_9AGAR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tricholomella constricta TaxID=117010 RepID=A0A8H5HIA4_9AGAR)

HSP 1 Score: 130 bits (326), Expect = 2.290e-32
Identity = 91/249 (36.55%), Postives = 126/249 (50.60%), Query Frame = 0
Query:    4 LGSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGLTSVEGRPKPIGAVLSGIDAGIQERSSRRSGNSTEYRGM--------VGSLMYASTGTRPDIACAVHQAARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDAD--WAED-------------------VEKQQLVTWFSTEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLLEDNKSAINLSKGSGAHCRTMHIE 223
            LG L  +LGIE++RDR   +IS+ Q  Y+  ++ RYG   +    KP+   +   D  ++  S++    + EY  M        VGSLMYA+ GTRPDIA AV   +R    P    +   K IFRYL    DL   +GG  N   L G+ DAD   AED                    ++Q+++   +TEA YVAA  A KEA++LR L+  I      +TTL  DN+SAI L+K    H R+ HI+
Sbjct:   61 LGELHWLLGIEIKRDRDRRSISLSQHSYLDSIIRRYGFQDL----KPVSIPM---DTNVRLTSAQCPATTAEYAQMRDIPYHEAVGSLMYAALGTRPDIAFAVQTVSRFSTKPGPAHWEAVKRIFRYLKGTKDLWLVYGG--NSKELLGYADADGSMAEDRHAISGYAFILYGGAISWSAKRQEIIALSTTEAEYVAATHAAKEALWLRSLVTEIFDTTLEATTLFSDNQSAIALTKDHQYHARSKHID 300          
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Match: A0A8H7TXH5_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7TXH5_9APHY)

HSP 1 Score: 133 bits (335), Expect = 5.560e-32
Identity = 85/241 (35.27%), Postives = 117/241 (48.55%), Query Frame = 0
Query:    4 LGSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGLTSVEGRPKPIGAVLSGIDAGIQERSSRRSGNSTEYRGMVGSLMYASTGTRPDIACAVHQAARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDADWAEDVE---------------------KQQLVTWFSTEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLLEDNKSAINLSKGSGAHCRTMHIE 223
            LG L  +LG EV R+R + TIS+ Q  YI  +L+R+G+        P+ + ++  D  I     R   +   Y  +VGSLMYA+ GTRPDIA AV   AR M  P    +   K + RYL    DL  TFG  S  H L G+ DADWA                         KQ ++   +TEA Y++  +  +E ++LR LL  +       T L  DN+SAI ++K    H RT HI+
Sbjct:  942 LGELRWLLGFEVHRNRSARTISLSQASYIDTLLDRFGMVEAHTLTVPLDSHINLFDIEITNED-RHEMSRKPYARLVGSLMYAAIGTRPDIAFAVSTLARFMATPAPVHWDAAKRVLRYLKGTRDLRLTFGTSS--HTLVGYSDADWASQPHRHSISGHVFLYSGGSISWSSRKQPIIALSTTEAEYISVSDTSREMLWLRSLLAELTSPLPTPTPLYSDNQSAITIAKSGMLHARTKHID 1179          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2869.7820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9IUY0_PARCT6.490e-3535.63Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A0C9VSW1_SPHS48.380e-3536.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A034V8I0_BACDO9.770e-3436.93Retrovirus-related Pol polyprotein from transposon... [more]
A0A4S4K468_9APHY9.850e-3436.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1J3I7B7_NOCCA1.130e-3335.51Retrovirus-related Pol polyprotein from transposon... [more]
A0A2R6PCF8_9APHY4.880e-3336.73Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]
A0A1J3DQ82_NOCCA1.490e-3233.88Retrovirus-related Pol polyprotein from transposon... [more]
Q94FM1_CITPA2.070e-3235.08Pol polyprotein n=1 Tax=Citrus paradisi TaxID=3765... [more]
A0A8H5HIA4_9AGAR2.290e-3236.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7TXH5_9APHY5.560e-3235.27Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 155..223
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 64..151
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 155..223
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 64..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2869contigH-paniculata_contig2869:981..1810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2869.7820.1mRNA_H-paniculata_contig2869.7820.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2869 480..1896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2869.7820.1 ID=prot_H-paniculata_contig2869.7820.1|Name=mRNA_H-paniculata_contig2869.7820.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=240bp
MKGLGSLSRVLGIEVRRDRPSGTISIFQDGYIREVLNRYGLTSVEGRPKP
IGAVLSGIDAGIQERSSRRSGNSTEYRGMVGSLMYASTGTRPDIACAVHQ
AARRMEDPCREDFSTCKHIFRYLSTVLDLGTTFGGKSNGHGLEGFIDADW
AEDVEKQQLVTWFSTEAAYVAAGEAGKEAVYLRELLGSIGFGCRGSTTLL
EDNKSAINLSKGSGAHCRTMHIECAGTEFESGFGKEYRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like