prot_H-paniculata_contig2868.7818.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2868.7818.1
Unique Nameprot_H-paniculata_contig2868.7818.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
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BLAST of mRNA_H-paniculata_contig2868.7818.1 vs. uniprot
Match: A0A6H5KBZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ9_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.190e-31
Identity = 54/97 (55.67%), Postives = 62/97 (63.92%), Query Frame = 0 
Query:    1 MCSFPCCGTCCGLLSFFGIWFLLCMGSMFSSQPMFTDLEIWEHHEDEDASRNCYIAAAIYFVTLLMSGGCIWYDKKRRSRRPAILSAVEALPELGIS 97
            MC F C G CCGLLS FGI+FL  +G MF+SQPMFTD+E+WE H D DAS NCYI   IY  TL  S GC  +DKKR +R P I         LG +
Sbjct:    1 MCGFKCIGQCCGLLSLFGIFFLFSVGHMFASQPMFTDVEVWEEHHDHDASVNCYIGGVIYICTLAASVGCFCFDKKRSARPPPIAHQASTTSHLGYT 97
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BLAST of mRNA_H-paniculata_contig2868.7818.1 vs. uniprot
Match: D7FVZ4_ECTSI (Ferredoxin nitrite reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ4_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 4.590e-15
Identity = 35/57 (61.40%), Postives = 39/57 (68.42%), Query Frame = 0 
Query:   28 MFSSQPMFTDLEIWEHHEDEDASRNCYIAAAIYFVTLLMSGGCIWYDKKRRSRRPAI 84
            MF SQPMFTD+E+WE H D DAS NCYI   IY  TL  S GC  +DKKR +R P I
Sbjct:    1 MFPSQPMFTDVEVWEEHHDHDASVNCYIGGVIYICTLAASVGCFCFDKKRSARPPTI 57
[Close]
BLAST of mRNA_H-paniculata_contig2868.7818.1 vs. uniprot
Match: A0A139AGN7_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AGN7_GONPJ)

HSP 1 Score: 54.7 bits (130), Expect = 1.730e-7
Identity = 30/86 (34.88%), Postives = 42/86 (48.84%), Query Frame = 0 
Query:    5 PCCGTCCGLLSFFGIWFLLCMGSMFSSQPMFTDLEIWEHHEDEDASRNCYIAAAIYFVTLLMSGGCIWYDKKRRSRRPAILSAVEA 90
            P C  CC + SFFGIWFLL +G ++S+      L        ++   +CYI A IY   LL      WY  K  ++   + +A EA
Sbjct:   13 PNCSMCCTITSFFGIWFLLILGGLWSAGSEMLLLTTGTDVNYKNIGMSCYIGAGIYVFFLLCCSCQYWYRSKIVAQEEELATAAEA 98
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2868.7818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KBZ9_9PHAE1.190e-3155.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVZ4_ECTSI4.590e-1561.40Ferredoxin nitrite reductase n=2 Tax=Ectocarpus Ta... [more]
A0A139AGN7_GONPJ1.730e-734.88Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31733:SF1RIBONUCLEASE KAPPAcoord: 5..81
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..104
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 54..73
IPR026770Ribonuclease kappaPANTHERPTHR31733FAMILY NOT NAMEDcoord: 5..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2868contigH-paniculata_contig2868:4211..9985 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2868.7818.1mRNA_H-paniculata_contig2868.7818.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2868 2445..10267 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2868.7818.1 ID=prot_H-paniculata_contig2868.7818.1|Name=mRNA_H-paniculata_contig2868.7818.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MCSFPCCGTCCGLLSFFGIWFLLCMGSMFSSQPMFTDLEIWEHHEDEDAS
RNCYIAAAIYFVTLLMSGGCIWYDKKRRSRRPAILSAVEALPELGISEPS
KQHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026770RNase_K