prot_H-paniculata_contig28674.7816.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28674.7816.1
Unique Nameprot_H-paniculata_contig28674.7816.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length130
Homology
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A6H5L8Q2_9PHAE (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8Q2_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 4.550e-65
Identity = 106/126 (84.13%), Postives = 119/126 (94.44%), Query Frame = 0
Query:    3 SNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 128
            S  AEID CL+REP PR+G+LEDDPEYKLVVASNELIQDIDPEMVEVHRF+VD+Y+QKFPELDSLIPQPAD+VRTVQVM+NEMDMTQV+L+SALPQTTVMVVSVTGSTT G+PLSE+DL EC+K C
Sbjct:  133 SQMAEIDECLKREPAPRVGALEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVELDSALPQTTVMVVSVTGSTTSGQPLSEEDLHECIKGC 258          
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A7S2C7I0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I0_9STRA)

HSP 1 Score: 145 bits (367), Expect = 5.940e-39
Identity = 69/127 (54.33%), Postives = 95/127 (74.80%), Query Frame = 0
Query:    2 ISNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 128
            + +   I+A L+R P P  G++E+DPEY+LVV  NEL+Q ID EMV VH+++VD Y++KFPEL+SL+PQ  D+++ VQ + NEMDMT VDL   LP   V+ VS+TGSTT G+PLSE DL +C++ C
Sbjct:   79 VKHMTAINAALERPPQPITGNVEEDPEYQLVVTCNELVQKIDDEMVNVHKYVVDTYSKKFPELESLVPQRLDYMQVVQTIGNEMDMTMVDLSDILPNAVVISVSMTGSTTSGQPLSESDLSQCMQGC 205          
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A836CKH5_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH5_9STRA)

HSP 1 Score: 140 bits (353), Expect = 7.020e-37
Identity = 66/110 (60.00%), Postives = 90/110 (81.82%), Query Frame = 0
Query:   20 IGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVCV 129
            +GS+E DP+Y+L+V SNE I DID E+V+VHRF+VD Y+ KFPEL+S++  P D++RTVQ+M+NEMDMT++ L++ LPQT+VMVVSVTGSTT GK L E +L+  L+ C 
Sbjct:  106 VGSVEQDPQYQLIVKSNEFIADIDDELVQVHRFVVDAYSPKFPELESIVTDPGDYIRTVQLMKNEMDMTRLPLDTVLPQTSVMVVSVTGSTTPGKALGEAELKRVLEGCA 215          
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A7S2SGQ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGQ5_9STRA)

HSP 1 Score: 130 bits (328), Expect = 3.720e-33
Identity = 65/121 (53.72%), Postives = 87/121 (71.90%), Query Frame = 0
Query:    8 IDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 128
            I+  L+  P+   G++EDDPEY+L+V+ NELIQ ID E++ V++F+ D Y  KFPEL+SL+P   D+VR VQ + NEMDMT VDL + LP   V+ VS+TGSTT G+PL EKDL +C   C
Sbjct:  126 IEEALEAPPSAVRGAVEDDPEYQLIVSCNELIQKIDDEILTVYKFVADLYGTKFPELESLVPNRLDYVRVVQAIGNEMDMTMVDLSAILPNALVISVSMTGSTTSGQPLPEKDLLQCNSGC 246          
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A0L0H5Q3_SPIPD (Nop domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H5Q3_SPIPD)

HSP 1 Score: 129 bits (324), Expect = 8.340e-33
Identity = 64/128 (50.00%), Postives = 91/128 (71.09%), Query Frame = 0
Query:    1 DISNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 128
            D+  K +    + R P    G +E+DPEYKL+V SN L  +ID E++ VH+FI D YA KFPEL+SLIP P D+ RTV+++ NEMD+T+VDL+S LP  T+MV++VT +TT G+PLS++   + L+ C
Sbjct:   66 DVMQKIDQFRDVPRHPAQNTGPVEEDPEYKLIVQSNNLTVEIDNEILVVHKFIRDHYAPKFPELESLIPNPIDYARTVKLIGNEMDLTKVDLKSFLPSATIMVLTVTATTTNGQPLSDEAAAKVLEAC 193          
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A1Y1YZQ7_9FUNG (Nop domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YZQ7_9FUNG)

HSP 1 Score: 126 bits (316), Expect = 9.000e-32
Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 0
Query:    1 DISNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 128
            ++  K E    + RE T  +G +E+DPEYKL+V +N+L   ID E++ +H+FI D YA KFPEL+SL+P   D+ R V+ + NE D+T+VDL S LP  T+MVV+VTGSTT G+PL E++ +  +  C
Sbjct:   46 EVLTKIEHFKGVPREATQLVGVMEEDPEYKLIVKANDLTAAIDTEIISIHKFIRDHYAPKFPELESLVPSALDYARAVKTIGNESDITKVDLRSILPSATIMVVTVTGSTTAGRPLDEREYKIVMDAC 173          
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A024U7H9_9STRA (Nop domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U7H9_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.270e-31
Identity = 65/106 (61.32%), Postives = 79/106 (74.53%), Query Frame = 0
Query:   24 EDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVCV 129
            +D PEYKLVVASN+L+  +D E++ VHRF+V+ YA+KFPEL+SL+P P D+ R VQ + NEMDMT VDL S LP  TVM VSVTGSTT GKPLS  DL    + C 
Sbjct:  102 QDAPEYKLVVASNDLMVKLDDEIIAVHRFLVEMYAKKFPELESLVPGPLDYARVVQRIGNEMDMTLVDLSSLLPSATVMGVSVTGSTTSGKPLSSSDLAIVEETCT 207          
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A507CD07_9FUNG (Nop domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CD07_9FUNG)

HSP 1 Score: 126 bits (316), Expect = 1.520e-31
Identity = 65/127 (51.18%), Postives = 87/127 (68.50%), Query Frame = 0
Query:    2 ISNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 128
            I  K ++   + R      G++EDDPEY L+VA+N L  DID EM+ + +FI DKYA KFPEL++LI  P D+VRTV+ + NEMD+TQVDL+S LP  TVMVV+VT +T+ GKPL    L   ++ C
Sbjct:   88 ILQKIDVAKAVPRREAIEGGAVEDDPEYPLIVAANNLTADIDTEMIRITKFIRDKYAPKFPELETLIVNPLDYVRTVKAIGNEMDLTQVDLQSFLPTATVMVVTVTATTSNGKPLPAAQLDTVVQAC 214          
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A7R9UDN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDN0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 4.310e-31
Identity = 63/129 (48.84%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    2 ISNKAEIDACLQREPTPR--IGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 128
            I++   ++A L+ E       G+ E DP Y+LVVA N+ +  I+ E  +V RF+ ++YA KFPEL+SL+P+  D+ RTV+V++N MD+++V L   LP  TVMVVSVTGSTT G+PL E+ L+ECLK C
Sbjct:   77 ITHMQAVEAALETEEDEEEWTGAAEADPVYQLVVACNQYVSAIEAETDKVFRFVAEQYAVKFPELESLVPKALDYARTVRVIKNNMDLSRVQLNDILPSATVMVVSVTGSTTSGEPLKEEVLQECLKGC 205          
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A6G0X9V3_9STRA (Nop domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X9V3_9STRA)

HSP 1 Score: 124 bits (310), Expect = 8.650e-31
Identity = 63/106 (59.43%), Postives = 79/106 (74.53%), Query Frame = 0
Query:   24 EDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVCV 129
            +D PEY+L+VASN+L+  +D E+V VHRF+V+ YA+KFPEL+SL+P P D+ R VQ + NEMDMT VDL + LP  TVM VSVTGSTT GKPLS  DL    + C 
Sbjct:   97 QDGPEYQLIVASNDLMVKMDDEIVAVHRFLVELYAKKFPELESLVPSPLDYARVVQRIGNEMDMTLVDLSTLLPSATVMGVSVTGSTTSGKPLSPSDLAIVQETCT 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8Q2_9PHAE4.550e-6584.13Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2C7I0_9STRA5.940e-3954.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CKH5_9STRA7.020e-3760.00Nop domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2SGQ5_9STRA3.720e-3353.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0L0H5Q3_SPIPD8.340e-3350.00Nop domain-containing protein n=2 Tax=Spizellomyce... [more]
A0A1Y1YZQ7_9FUNG9.000e-3247.66Nop domain-containing protein n=1 Tax=Basidiobolus... [more]
A0A024U7H9_9STRA1.270e-3161.32Nop domain-containing protein n=3 Tax=Aphanomyces ... [more]
A0A507CD07_9FUNG1.520e-3151.18Nop domain-containing protein n=1 Tax=Synchytrium ... [more]
A0A7R9UDN0_9STRA4.310e-3148.84Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A6G0X9V3_9STRA8.650e-3159.43Nop domain-containing protein n=5 Tax=Aphanomyces ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012976NOSICSMARTSM00931NOSIC_2coord: 31..83
e-value: 1.8E-13
score: 60.8
NoneNo IPR availableGENE3D1.10.150.460coord: 62..112
e-value: 2.8E-7
score: 32.8
IPR002687Nop domainPFAMPF01798Nopcoord: 38..128
e-value: 8.2E-19
score: 68.0
IPR029012Helix hairpin bin domain superfamilyGENE3D1.10.287.660coord: 32..128
e-value: 2.8E-7
score: 32.8
IPR027105U4/U6 small nuclear ribonucleoprotein Prp31PANTHERPTHR13904PRE-MRNA SPLICING FACTOR PRP31coord: 16..128
IPR036070Nop domain superfamilySUPERFAMILY89124Nop domaincoord: 24..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28674contigH-paniculata_contig28674:235..1014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28674.7816.1mRNA_H-paniculata_contig28674.7816.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28674 235..1014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28674.7816.1 ID=prot_H-paniculata_contig28674.7816.1|Name=mRNA_H-paniculata_contig28674.7816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp
DISNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVH
RFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTT
VMVVSVTGSTTGGKPLSEKDLRECLKVCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012976NOSIC
IPR002687Nop_dom
IPR029012Helix_hairpin_bin_sf
IPR027105Prp31
IPR036070Nop_dom_sf