mRNA_H-paniculata_contig28674.7816.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A6H5L8Q2_9PHAE (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8Q2_9PHAE) HSP 1 Score: 215 bits (548), Expect = 4.550e-65 Identity = 106/126 (84.13%), Postives = 119/126 (94.44%), Query Frame = 1
Query: 7 SNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 384
S AEID CL+REP PR+G+LEDDPEYKLVVASNELIQDIDPEMVEVHRF+VD+Y+QKFPELDSLIPQPAD+VRTVQVM+NEMDMTQV+L+SALPQTTVMVVSVTGSTT G+PLSE+DL EC+K C
Sbjct: 133 SQMAEIDECLKREPAPRVGALEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVELDSALPQTTVMVVSVTGSTTSGQPLSEEDLHECIKGC 258
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A7S2C7I0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I0_9STRA) HSP 1 Score: 145 bits (367), Expect = 5.940e-39 Identity = 69/127 (54.33%), Postives = 95/127 (74.80%), Query Frame = 1
Query: 4 ISNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 384
+ + I+A L+R P P G++E+DPEY+LVV NEL+Q ID EMV VH+++VD Y++KFPEL+SL+PQ D+++ VQ + NEMDMT VDL LP V+ VS+TGSTT G+PLSE DL +C++ C
Sbjct: 79 VKHMTAINAALERPPQPITGNVEEDPEYQLVVTCNELVQKIDDEMVNVHKYVVDTYSKKFPELESLVPQRLDYMQVVQTIGNEMDMTMVDLSDILPNAVVISVSMTGSTTSGQPLSESDLSQCMQGC 205
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A836CKH5_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH5_9STRA) HSP 1 Score: 140 bits (353), Expect = 7.020e-37 Identity = 66/110 (60.00%), Postives = 90/110 (81.82%), Query Frame = 1
Query: 58 IGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVCV 387
+GS+E DP+Y+L+V SNE I DID E+V+VHRF+VD Y+ KFPEL+S++ P D++RTVQ+M+NEMDMT++ L++ LPQT+VMVVSVTGSTT GK L E +L+ L+ C
Sbjct: 106 VGSVEQDPQYQLIVKSNEFIADIDDELVQVHRFVVDAYSPKFPELESIVTDPGDYIRTVQLMKNEMDMTRLPLDTVLPQTSVMVVSVTGSTTPGKALGEAELKRVLEGCA 215
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A7S2SGQ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGQ5_9STRA) HSP 1 Score: 130 bits (328), Expect = 3.720e-33 Identity = 65/121 (53.72%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 22 IDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 384
I+ L+ P+ G++EDDPEY+L+V+ NELIQ ID E++ V++F+ D Y KFPEL+SL+P D+VR VQ + NEMDMT VDL + LP V+ VS+TGSTT G+PL EKDL +C C
Sbjct: 126 IEEALEAPPSAVRGAVEDDPEYQLIVSCNELIQKIDDEILTVYKFVADLYGTKFPELESLVPNRLDYVRVVQAIGNEMDMTMVDLSAILPNALVISVSMTGSTTSGQPLPEKDLLQCNSGC 246
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A0L0H5Q3_SPIPD (Nop domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H5Q3_SPIPD) HSP 1 Score: 129 bits (324), Expect = 8.340e-33 Identity = 64/128 (50.00%), Postives = 91/128 (71.09%), Query Frame = 1
Query: 1 DISNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 384
D+ K + + R P G +E+DPEYKL+V SN L +ID E++ VH+FI D YA KFPEL+SLIP P D+ RTV+++ NEMD+T+VDL+S LP T+MV++VT +TT G+PLS++ + L+ C
Sbjct: 66 DVMQKIDQFRDVPRHPAQNTGPVEEDPEYKLIVQSNNLTVEIDNEILVVHKFIRDHYAPKFPELESLIPNPIDYARTVKLIGNEMDLTKVDLKSFLPSATIMVLTVTATTTNGQPLSDEAAAKVLEAC 193
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A1Y1YZQ7_9FUNG (Nop domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YZQ7_9FUNG) HSP 1 Score: 126 bits (316), Expect = 9.000e-32 Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 1 DISNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 384
++ K E + RE T +G +E+DPEYKL+V +N+L ID E++ +H+FI D YA KFPEL+SL+P D+ R V+ + NE D+T+VDL S LP T+MVV+VTGSTT G+PL E++ + + C
Sbjct: 46 EVLTKIEHFKGVPREATQLVGVMEEDPEYKLIVKANDLTAAIDTEIISIHKFIRDHYAPKFPELESLVPSALDYARAVKTIGNESDITKVDLRSILPSATIMVVTVTGSTTAGRPLDEREYKIVMDAC 173
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A024U7H9_9STRA (Nop domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U7H9_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.270e-31 Identity = 65/106 (61.32%), Postives = 79/106 (74.53%), Query Frame = 1
Query: 70 EDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVCV 387
+D PEYKLVVASN+L+ +D E++ VHRF+V+ YA+KFPEL+SL+P P D+ R VQ + NEMDMT VDL S LP TVM VSVTGSTT GKPLS DL + C
Sbjct: 102 QDAPEYKLVVASNDLMVKLDDEIIAVHRFLVEMYAKKFPELESLVPGPLDYARVVQRIGNEMDMTLVDLSSLLPSATVMGVSVTGSTTSGKPLSSSDLAIVEETCT 207
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A507CD07_9FUNG (Nop domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CD07_9FUNG) HSP 1 Score: 126 bits (316), Expect = 1.520e-31 Identity = 65/127 (51.18%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 4 ISNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 384
I K ++ + R G++EDDPEY L+VA+N L DID EM+ + +FI DKYA KFPEL++LI P D+VRTV+ + NEMD+TQVDL+S LP TVMVV+VT +T+ GKPL L ++ C
Sbjct: 88 ILQKIDVAKAVPRREAIEGGAVEDDPEYPLIVAANNLTADIDTEMIRITKFIRDKYAPKFPELETLIVNPLDYVRTVKAIGNEMDLTQVDLQSFLPTATVMVVTVTATTSNGKPLPAAQLDTVVQAC 214
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A6G0X9V3_9STRA (Nop domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X9V3_9STRA) HSP 1 Score: 124 bits (310), Expect = 8.650e-31 Identity = 63/106 (59.43%), Postives = 79/106 (74.53%), Query Frame = 1
Query: 70 EDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVCV 387
+D PEY+L+VASN+L+ +D E+V VHRF+V+ YA+KFPEL+SL+P P D+ R VQ + NEMDMT VDL + LP TVM VSVTGSTT GKPLS DL + C
Sbjct: 97 QDGPEYQLIVASNDLMVKMDDEIVAVHRFLVELYAKKFPELESLVPSPLDYARVVQRIGNEMDMTLVDLSTLLPSATVMGVSVTGSTTSGKPLSPSDLAIVQETCT 202
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Match: A0A7S4E5R5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5R5_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.220e-30 Identity = 62/119 (52.10%), Postives = 83/119 (69.75%), Query Frame = 1
Query: 28 ACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHRFIVDKYAQKFPELDSLIPQPADFVRTVQVMQNEMDMTQVDLESALPQTTVMVVSVTGSTTGGKPLSEKDLRECLKVC 384
A +R P S +DD EY L+V SNE++ +D E+ EVH ++ D Y +KFPEL++L+P +++R V M NEMDMTQVDL LP T VMVVSVTGSTT G+PL+E +L EC++ C
Sbjct: 92 AIAERSEKP--ASFDDDEEYALIVESNEILVKMDAELHEVHAYVNDLYGKKFPELETLVPSKLEYLRVVAQMGNEMDMTQVDLSGILPPTVVMVVSVTGSTTSGQPLTESELGECMRGC 208 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28674.7816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig28674.7816.1 >prot_H-paniculata_contig28674.7816.1 ID=prot_H-paniculata_contig28674.7816.1|Name=mRNA_H-paniculata_contig28674.7816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp DISNKAEIDACLQREPTPRIGSLEDDPEYKLVVASNELIQDIDPEMVEVHback to top mRNA from alignment at H-paniculata_contig28674:235..1014+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig28674.7816.1 ID=mRNA_H-paniculata_contig28674.7816.1|Name=mRNA_H-paniculata_contig28674.7816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=780bp|location=Sequence derived from alignment at H-paniculata_contig28674:235..1014+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig28674:235..1014+ >mRNA_H-paniculata_contig28674.7816.1 ID=mRNA_H-paniculata_contig28674.7816.1|Name=mRNA_H-paniculata_contig28674.7816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at H-paniculata_contig28674:235..1014+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |