mRNA_H-paniculata_contig28670.7815.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Match: D7FX85_ECTSI (Excinuclease ABC subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX85_ECTSI) HSP 1 Score: 589 bits (1519), Expect = 6.050e-197 Identity = 387/759 (50.99%), Postives = 459/759 (60.47%), Query Frame = 1
Query: 1 PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRVLPLRKRHRPLYKDKPCLNYDIGICPGACQKLISENVYTETVRLAEMVFRGQGGELLERLRQRMERASRAEEFEKAGEYKEQMALVRGGLLGSALHFSPGSGAIAXXXXXXXXXXXXXXXXXXXXXMVGVRG--KARGKG-KLKAAVAVVERRDVVAVGLAGNLACFQVFRVREGRLIGRLGFTYRVEERGLTRGEVLQACLERYWGDALASTFSSSS-LSEGRSSQQSAEGSGKKEGAAENRGEVFA--DIPDEVVTADALPEGGAELLSELLSEAKVTFNAKDSASAHVAAAAADKAKTDGAQQRKGRT-KGDTGDSARTERSIIRPLFLSLPAV-VRIVHDE-GTGERHHLCVMVSKNAELEARRLLKGSEGIAEGLEQLARMLGLSSPPARIEGFDVSHTAGGQAVASSVSFVDGKADKRGHRRYRIKTIDVKKGHSDDYASLKEVVTRRFFPPRAGAYTGNDADVDPXXXXXXXXXXXXPIKQLPDLVLIDGGKGQLAAAVKGATIAAAKWRRVQGDHNGAEVI-----DSAKGS-------SDGNVGDESARVG---------RRDGRSVSYMIPVKGDTFTAQTAAAAGGQGAFKEVDPDLILLRETESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVDVGRGRKVAFVSLAKKEEEVFVPGDALPLAAAVEAGPDSPGVMILRQV 2187
PYVC TWSE YPR+++T+D+PR GGG +DRYYGPFVD GQ++STVALVRRVLPLR+R RPLYKDKPCLNYD+GICPG CQ L+SE Y ETVRLAEMVFRG+G +LL L+ RME SRAE FE+AGE K QM LVRGGLLGS+LHFS G A G RG + RG G + +A RRDVVAVGLAG+LACFQVF+VR GRLIGRLGFTYRVEE GL+RGEVLQACLERYWGD L S +++ + + R + GA RG F+ +P+E+VTADALP+GGA LL+ELLS A+ K +A A A A +G R T K TG +AR++RS+ + PAV VR+VH E G GERHHLCVM KNAELEA+RLL+G E IA GL QLARMLGL S PARIEG+DVSHT GG AVAS V F+DGKA + HRRYRI++ ++KGHSDDYASL+EV+ RRF PP P P+ P+LVLIDGGKGQLAAA++GA IAA W V+ G + + A G+ S G ES + RRD S S + P+ G+ TAQ E DPD +L V VG GR+V FVSLAKKEEEV+VPG + PLAAA+EAGP SPGVM+LRQV
Sbjct: 130 PYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKAQMTLVRGGLLGSSLHFSAGGVAAGGG---------------------GDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGDLACFQVFQVRGGRLIGRLGFTYRVEEEGLSRGEVLQACLERYWGDVLMSARTAAGGVGDERGDNLPSRTLNGNPGAKGGRGGGFSVLHVPEEIVTADALPDGGAVLLAELLSGAR-----KAAADAQRGAQATGPG--EGGSPRDLTTEKATTGKTARSKRSVDKSYP---PAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLRGGESIARGLSQLARMLGLGSNPARIEGYDVSHTGGGNAVASLVCFLDGKASPKDHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPT------------PSLRSPRPPSQANPV---PELVLIDGGKGQLAAALEGAAIAADAWLSVE--RGGTTTLTGFDTEPAVGAAAAVDTKSPGAPPVESRELAGTPLLDDAVRRDEASWSALPPLLGER-TAQ------------EEDPDAVLSTAA------------------------------VPPPEPSDGDVAGARSVGVGGGRRVTFVSLAKKEEEVYVPGSSEPLAAALEAGPSSPGVMVLRQV 797
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Match: UVRC_SYNY3 (UvrABC system protein C n=9 Tax=Synechocystis TaxID=1142 RepID=UVRC_SYNY3) HSP 1 Score: 243 bits (621), Expect = 1.800e-67 Identity = 182/551 (33.03%), Postives = 248/551 (45.01%), Query Frame = 1
Query: 1 PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRVLPLRKRHRPLYKDKPCLNYDIGICPGACQKLISENVYTETVRLAEMVFRGQGGELLERLRQRMERASRAEEFEKAGEYKEQMALVRGGLLGSALHFSPGSGAIAXXXXXXXXXXXXXXXXXXXXXMVGVRGKARGKGKLKAAVAVVERRDVVAVGLAGNLACFQVFRVREGRLIGRLGFTYRVEERGLTRGEVLQACLERYWGDALASTFSSSSLSEGRSSQQSAEGSGKKEGAAENRGEVFADIPDEVVTADALPEGGAELLSELLSEA---KVTFNAKDSASAHVAAAAADKAKTDGAQQRKGRTKGDTGDSARTERSIIRPLFLSLPAVVRIVHDEGTGERHHLCVMVSKNAELEARRLLKGSEGIAEGLEQLARMLGLSSPPARIEGFDVSHTAGGQAVASSVSFVDGKADKRGHRRYRIKTIDVKKGHSDDYASLKEVVTRRFFPPRAGAYTGNDADVDPXXXXXXXXXXXXPIKQLPDLVLIDGGKGQLAAAVK 1644
PYVC TWSE+YPR+ +T R R +DRYYGP+VD LR T+ L++R+ PLR+R +PL+K +PCLNYDIG CPG CQ+LI+ Y +T++ MVF+G+ EL + L Q+ME+A+ +FE+A AL+R + GK K+ + R D +AV G ++ Q+F++R GRL+GRLGF E L +GEVLQ LE+++ A +IP EV+ ALP+G ELL++ L+ KVTFN LP + L MV +NA+ E RL K + LE LA +L L + P RIEG+D+SH G AVAS V F+DG ++ +R Y+IK +K GHSDD+ASL EV+ RRF G D PDL++IDGGKGQL+A VK
Sbjct: 114 PYVCITWSETYPRIFIT--RKRRLNQAKDRYYGPYVDSFSLRQTLRLIQRIFPLRQRRQPLFKHRPCLNYDIGRCPGVCQELITPEDYRQTLQKVAMVFQGRTQELHQLLTQQMEKAAADLKFEQA-------ALIR--------------------------------------DQINSLGKLNADQKVSLPQDTISR-DAIAVASDGQISAIQLFQIRAGRLVGRLGFFADGVESELEKGEVLQRVLEQHYQQVEA-----------------------------------VEIPSEVILPCALPDG--ELLNDWLTSQRGRKVTFN--------------------------------------------------LPQ---------RQTKAELLEMVERNAQYELERLQKQTAKNVTALEDLAEILNLETLPKRIEGYDISHIQGSNAVASQVVFIDGVPAQQYYRHYKIKNPSIKVGHSDDFASLAEVIIRRFQSSVKGKKNQQD---------------------WPDLIMIDGGKGQLSAVVK 499
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Match: A0A1Z3HQZ6_9CYAN (UvrABC system protein C n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HQZ6_9CYAN) HSP 1 Score: 243 bits (620), Expect = 2.540e-67 Identity = 184/549 (33.52%), Postives = 249/549 (45.36%), Query Frame = 1
Query: 1 PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRVLPLRKRHRPLYKDKPCLNYDIGICPGACQKLISENVYTETVRLAEMVFRGQGGELLERLRQRMERASRAEEFEKAGEYKEQMALVRGGLLGSALHFSPGSGAIAXXXXXXXXXXXXXXXXXXXXXMVGVRGKARGKGKLKAAVAV-VERRDVVAVGLAGNLACFQVFRVREGRLIGRLGFTYRVEERGLTRGEVLQACLERYWGDALASTFSSSSLSEGRSSQQSAEGSGKKEGAAENRGEVFADIPDEVVTADALPEGGAELLSELLSEAKVTFNAKDSASAHVAAAAADKAKTDGAQQRKGRTKGDTGDSARTERSIIRPLFLSLPAVVRIVHDEGTGERHHLCVMVSKNAELEARRLLKGSEGIAEGLEQLARMLGLSSPPARIEGFDVSHTAGGQAVASSVSFVDGKADKRGHRRYRIKTIDVKKGHSDDYASLKEVVTRRFFPPRAGAYTGNDADVDPXXXXXXXXXXXXPIKQLPDLVLIDGGKGQLAAAVK 1644
PY+C TWSE+YPRL +T+ R R G QDRYYGP+VD G LR T+ALV+R+ PLR+R +PL+KD+PCLNYDIG CPG CQ+LI+ Y TV+ MVF+G+ EL+ L Q+ME A+ +FE+A ++Q +RG R K A+ RD +A+ + AC Q+F+VR GRL+GRLGF + G G++LQ LE ++ A +IP ++ LP+G E+L LS QR+G R + L +P + L MV +NA+ E R + ++ A+ L LA ML L P RIEG+D+SH G AVAS V F DG A K+ +R Y+IK +V+ GHSDD+ASL EV+ RRF A + D PDLV+IDGGKGQL+A V+
Sbjct: 114 PYLCITWSEAYPRLFITRKRRRGKG--QDRYYGPYVDVGLLRRTLALVKRIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQQLITSQEYHRTVQRVAMVFQGRTQELVSMLTQQMESAAAELKFEQAARLRDQ-----------------------------------------------IRGLERLCADQKVALPDDTVSRDAIALAADAHHACVQIFQVRAGRLVGRLGFVADIHSGG--PGDILQRVLESHYQSVDA-----------------------------------VEIPAVILCQHDLPDG--EILGNYLS------------------------------QRRG-----------------RKVTLEVPQ---------RQSKASLVEMVERNAQYELARTQRFADRNAQALLDLAEMLDLPDLPRRIEGYDISHVQGADAVASQVVFTDGMAAKQHYRHYKIKNPEVRAGHSDDFASLAEVMGRRFRRYAADPQKPRLGNPD-----------------WPDLVMIDGGKGQLSAVVE 501
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Match: UPI0019F1D063 (Excinuclease ABC subunit UvrC n=1 Tax=Oscillatoriales cyanobacterium LEGE 11467 TaxID=1828826 RepID=UPI0019F1D063) HSP 1 Score: 242 bits (617), Expect = 7.200e-67 Identity = 176/552 (31.88%), Postives = 256/552 (46.38%), Query Frame = 1
Query: 1 PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRVLPLRKRHRPLYKDKPCLNYDIGICPGACQKLISENVYTETVRLAEMVFRGQGGELLERLRQRMERASRAEEFEKAGEYKEQMALVRGGLLGSALHFSPGSGAIAXXXXXXXXXXXXXXXXXXXXXMVGVRGKARGKGKLKAAVAVVERRDVVAVGLAGNLACFQVFRVREGRLIGRLGFTYRVEERGL-----TRGEVLQACLERYWGDALASTFSSSSLSEGRSSQQSAEGSGKKEGAAENRGEVFADIPDEVVTADALPEGGAELLSELLSEAKVTFNAKDSASAHVAAAAADKAKTDGAQQRKGRTKGDTGDSARTERSIIRPLFLSLPAVVRIVHDEGTGERHHLCVMVSKNAELEARRLLKGSEGIAEGLEQLARMLGLSSPPARIEGFDVSHTAGGQAVASSVSFVDGKADKRGHRRYRIKTIDVKKGHSDDYASLKEVVTRRFFPPRAGAYTGNDADVDPXXXXXXXXXXXXPIKQLPDLVLIDGGKGQLAAAV 1641
PY+C TWS+ YPR+ +T R R E+DRYYGP+VD G LRST+ +V+R+ PL++R +PL+KD+PCLNYDIG CPG CQ+L+S Y +TV+ M+F+G+ EL++ L RM +AS EFEKA + ++++ ++ LG+ S ++ RD +A+ AC Q+F++R G+L+GRLGF + RG +LQ LE ++ QS E +IP E++ L + E+LS+ LSE +KGR + SI+ P + + L MV +NAE E R+ K + + ++ LA +L L P RIEG+D+SH G AVAS V F+DG K+ +RRY+IK +V GHSDD+AS+ EV++RRF + A T ++ PDLV+IDGGKGQL+A V
Sbjct: 113 PYLCITWSKKYPRIFIT--RKRRAKNEKDRYYGPYVDTGLLRSTLNIVKRIFPLQQRPKPLFKDRPCLNYDIGRCPGVCQQLVSPEEYRKTVQKVAMIFQGRTQELIDILTDRMAQASENLEFEKAAQLRDKIQGLQS--LGADQKVSLPDDRVS--------------------------------------------RDAIALAANDRFACVQLFQIRAGKLVGRLGFVFETSSTNSGNLQEDRGAILQRALEEHY--------------------QSVES---------------VEIPTEIIVQAELSD--EEILSDWLSE------------------------------KKGR-----------KVSILVPQRQT---------------KAELVAMVERNAEYELARMQKMGDRNLQAMQDLADILDLPELPHRIEGYDISHVQGSDAVASRVVFIDGIPAKQHYRRYKIKNPEVTAGHSDDFASMAEVISRRFRKDKTVAETS---------------------RKFPDLVMIDGGKGQLSAVV 502
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Match: A0A0M1JMA2_9CYAN (UvrABC system protein C n=1 Tax=Planktothricoides sp. SR001 TaxID=1705388 RepID=A0A0M1JMA2_9CYAN) HSP 1 Score: 241 bits (615), Expect = 1.990e-66 Identity = 184/551 (33.39%), Postives = 265/551 (48.09%), Query Frame = 1
Query: 1 PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRVLPLRKRHRPLYKDKPCLNYDIGICPGACQKLISENVYTETVRLAEMVFRGQGGELLERLRQRMERASRAEEFEKAGEYKEQMALVRGGLLGSALHFSPGSGAIAXXXXXXXXXXXXXXXXXXXXXMVGVRGKARGKGKLKAAVAVVE---RRDVVAVGLAGNLACFQVFRVREGRLIGRLGFTYRVEERGLTRGEVLQACLERYWGDALASTFSSSSLSEGRSSQQSAEGSGKKEGAAENRGEVFADIPDEVVTADALPEGGAELLSELLSEAKVTFNAKDSASAHVAAAAADKAKTDGAQQRKGRTKGDTGDSARTERSIIRPLFLSLPAVVRIVHDEGTGERHHLCVMVSKNAELEARRLLKGSEGIAEGLEQLARMLGLSSPPARIEGFDVSHTAGGQAVASSVSFVDGKADKRGHRRYRIKTIDVKKGHSDDYASLKEVVTRRFFPPRAGAYTGNDADVDPXXXXXXXXXXXXPIKQLPDLVLIDGGKGQLAAAVK 1644
P++C TWSE YPR+ +T+ R ++ QDRYYGP+VD QLR+T+ LV+R+ PLR+R +PL+KD+PCLNYDIG CPG CQ LI+ Y +TV+ MVF+G+ ELLE L ME+A+ + FE+A ++Q+A ++G +G++ K VA+ + RD VA+ G C Q+F++R G+L+GRLGF R+ + + +Q +GR S +S E F D+ ++ E+ SE+L V + KD +A+ +D RKGR + SI+ P S + L MV +NA E R+ K S+ + L+ LA +L L+ P RIEG+D+SH G AVAS V F+DG K+ +R Y+IK V GH+DD+AS+ EV+ RRF +AG + + D LPDLV+IDGGKGQL+A VK
Sbjct: 119 PFLCITWSEPYPRVFITRKRQKSN--PQDRYYGPYVDSQQLRNTLKLVKRIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQGLITPEDYHKTVQKVAMVFQGRTAELLETLTSYMEQAAESLNFEQAAIIRDQIASLKG---------------------------------------LGIQQK----------VALPDDRISRDAVALATDGQNTCIQLFQIRAGQLVGRLGFVVRLSPVEPPQPDGVQ---------------------KGRQSDESRE---------------FGDVLQRILEEHYQQVDAVEIPSEIL----VQYELKDED--FLASWLSD---------RKGR-----------KVSILTPQRQS---------------KAELIEMVERNAYHELSRMQKVSDRNMQALQDLAEILDLADLPHRIEGYDISHIQGSDAVASRVVFIDGLPAKQHYRHYQIKNPAVHAGHADDFASMAEVIQRRFRHGKAGKNSAHSIPED-----------------LPDLVMIDGGKGQLSAVVK 524
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Match: A0A6P1AK49_9CYAN (UvrABC system protein C n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P1AK49_9CYAN) HSP 1 Score: 239 bits (611), Expect = 4.700e-66 Identity = 178/547 (32.54%), Postives = 252/547 (46.07%), Query Frame = 1
Query: 1 PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRVLPLRKRHRPLYKDKPCLNYDIGICPGACQKLISENVYTETVRLAEMVFRGQGGELLERLRQRMERASRAEEFEKAGEYKEQMALVRGGLLGSALHFSPGSGAIAXXXXXXXXXXXXXXXXXXXXXMVGVRGKARGKGKLKAAVAVVERRDVVAVGLAGNLACFQVFRVREGRLIGRLGFTYRVEERGLTRGEVLQACLERYWGDALASTFSSSSLSEGRSSQQSAEGSGKKEGAAENRGEVFADIPDEVVTADALPEGGAELLSELLSEAKVTFNAKDSASAHVAAAAADKAKTDGAQQRKGRTKGDTGDSARTERSIIRPLFLSLPAVVRIVHDEGTGERHHLCVMVSKNAELEARRLLKGSEGIAEGLEQLARMLGLSSPPARIEGFDVSHTAGGQAVASSVSFVDGKADKRGHRRYRIKTIDVKKGHSDDYASLKEVVTRRFFPPRAGAYTGNDADVDPXXXXXXXXXXXXPIKQLPDLVLIDGGKGQLAAAV 1641
PYVC TWSE YPR+ +T+ R + G E+DRYYGP+VD LRST+ LV+R+ PLR+R RPL+KD+PCLNYD+G CPG CQ LI+ Y + V+ MVF+G+ GELLE L+Q+ME+A+ FE A + ++++ ++ L + S ++ RD +A+ C Q+F++R G+L+GRLGF + + T GE+LQ LE ++ + +IP E++ LPE E+L + LSE K GR + II P R + E L MV +NA+ E R + ++ E L+ LA +L L+ P RIEG+D+SH G AVAS V FVDG A K+ +R Y+IK +V+ GHSDD+AS+ EV+ RRF + D PDL++IDGGKGQL+A V
Sbjct: 114 PYVCITWSEDYPRIFITRKRRK--GNEKDRYYGPYVDVRLLRSTLHLVKRLFPLRQRPRPLFKDRPCLNYDLGCCPGVCQALITPEAYHQIVQKVAMVFQGRTGELLELLQQQMEKAAGELNFELAAQIRDRLQGLKA--LQADRKVSLPDDTVS--------------------------------------------RDAIAIAADDKHGCIQLFQIRAGKLVGRLGFF--ADAQSGTPGEILQRVLEEHYSYVDS-----------------------------------VEIPPEIIVQYELPE--TEILVDWLSEIK------------------------------GR-----------KVQIIAPQ--------RQIKAE-------LIEMVERNAKYELERTQRFADRNLEALQDLAEILDLADLPKRIEGYDISHIQGANAVASQVVFVDGVAAKQHYRHYKIKDPNVRAGHSDDFASMAEVIRRRFRKYAENTSLERQGNPD-----------------FPDLIMIDGGKGQLSAVV 500
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Match: UPI001681B2CE (Excinuclease ABC subunit UvrC n=2 Tax=Leptolyngbya sp. FACHB-36 TaxID=2692808 RepID=UPI001681B2CE) HSP 1 Score: 240 bits (612), Expect = 5.280e-66 Identity = 175/547 (31.99%), Postives = 250/547 (45.70%), Query Frame = 1
Query: 1 PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRVLPLRKRHRPLYKDKPCLNYDIGICPGACQKLISENVYTETVRLAEMVFRGQGGELLERLRQRMERASRAEEFEKAGEYKEQMALVRGGLLGSALHFSPGSGAIAXXXXXXXXXXXXXXXXXXXXXMVGVRGKARGKGKLKAAVAVVERRDVVAVGLAGNLACFQVFRVREGRLIGRLGFTYRVEERGLTRGEVLQACLERYWGDALASTFSSSSLSEGRSSQQSAEGSGKKEGAAENRGEVFADIPDEVVTADALPEGGAELLSELLSEAKVTFNAKDSASAHVAAAAADKAKTDGAQQRKGRTKGDTGDSARTERSIIRPLFLSLPAVVRIVHDEGTGERHHLCVMVSKNAELEARRLLKGSEGIAEGLEQLARMLGLSSPPARIEGFDVSHTAGGQAVASSVSFVDGKADKRGHRRYRIKTIDVKKGHSDDYASLKEVVTRRFFPPRAGAYTGNDADVDPXXXXXXXXXXXXPIKQLPDLVLIDGGKGQLAAAV 1641
PY+C TWSE YPR+ +T R R G E+DRYYGP+VD LR+T+ LV+R+ PLR+R +PL+KD+PCLNYDIG CPG CQ +I+ + Y +TV+ MVF+G+ GEL+E L +ME+A+ A FE A ++Q+ ++ LG+ S + ++ +D +A+ AC Q+F++R GRL+GRLGF + + G +LQ LE ++ +IP E++ ALPE AE+L+E LS++K GR +T+ +I MV +NAE E R + ++ + ++ LA +L L P RIEG+D+SH G AVAS V FVDG K+ +R Y+IK V GHSDD+AS+ EV+ RRF A G + + PDLV+IDGGKGQL+A V
Sbjct: 112 PYLCITWSEDYPRIFIT--RKRRMGREKDRYYGPYVDTRLLRTTLHLVKRIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQAVITPDEYRKTVQKVAMVFQGRSGELVEILTNQMEQAAEALNFEVAARIRDQIVGLK--TLGADQKVSLPNDTVS--------------------------------------------QDAIALAADEQHACVQLFQIRAGRLVGRLGFI--ADAQSGEPGAILQRVLEEHFQTVDP-----------------------------------VEIPAEILVQHALPE--AEMLAEFLSQSK------------------------------GRKVAILAPQRQTKAELIE--------------------------MVERNAEYELARTQRSADRNTQAMQDLAELLDLPDVPRRIEGYDISHIQGSDAVASQVVFVDGLPAKQHYRHYKIKNPTVTSGHSDDFASMAEVIRRRFRKFAALKEKGEQLRSEETDSPLTSHAAL--LTDFPDLVMIDGGKGQLSAVV 513
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Match: A0A2T1EK80_9CYAN (UvrABC system protein C n=4 Tax=Bacteria TaxID=2 RepID=A0A2T1EK80_9CYAN) HSP 1 Score: 240 bits (612), Expect = 5.600e-66 Identity = 178/547 (32.54%), Postives = 251/547 (45.89%), Query Frame = 1
Query: 1 PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRVLPLRKRHRPLYKDKPCLNYDIGICPGACQKLISENVYTETVRLAEMVFRGQGGELLERLRQRMERASRAEEFEKAGEYKEQMALVRGGLLGSALHFSPGSGAIAXXXXXXXXXXXXXXXXXXXXXMVGVRGKARGKGKLKAAVAVVERRDVVAVGLAGNLACFQVFRVREGRLIGRLGFTYRVEERGLTRGEVLQACLERYWGDALASTFSSSSLSEGRSSQQSAEGSGKKEGAAENRGEVFADIPDEVVTADALPEGGAELLSELLSEAKVTFNAKDSASAHVAAAAADKAKTDGAQQRKGRTKGDTGDSARTERSIIRPLFLSLPAVVRIVHDEGTGERHHLCVMVSKNAELEARRLLKGSEGIAEGLEQLARMLGLSSPPARIEGFDVSHTAGGQAVASSVSFVDGKADKRGHRRYRIKTIDVKKGHSDDYASLKEVVTRRFFPPRAGAYTGNDADVDPXXXXXXXXXXXXPIKQLPDLVLIDGGKGQLAAAV 1641
PY+C TWSE+YPR+ +T R R G E+DRYYGP+VD G LR T+ LV+R+ PLR+R +PL+KD+PCLNYDIG CPG CQ LI+ Y + V+ M+F+G+ EL + L +ME+A+ A FE+A ++Q+A ++ LLG+ S I+ RD +A+ AC Q+F++R GRL+GRLGF + + G +LQ LE ++ A +IP E++ LPEG ++L+E LSE TKG + +I+ P ++ MV +NAE E R + ++ A+ + LA +L L P RIEG+D+SH G AVAS V F+DG K+ +R Y+IKT V GHSDD+AS+ EV+ RRF R A ++ PDLV+IDGGKGQL+A V
Sbjct: 113 PYLCITWSEAYPRIFIT--RKRRLGKEKDRYYGPYVDTGLLRQTLHLVKRIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQALITPEHYHKIVQKVAMIFQGRTRELTDILTAQMEQAAEALNFEQAARIRDQIAGLK--LLGADQKVSMADDTIS--------------------------------------------RDAIALAADDQYACVQLFQIRAGRLVGRLGFV--ADAQSGEPGAILQRVLEEHYQTVDA-----------------------------------VEIPAEIMVQHDLPEG--DMLAEFLSE----------------------------------TKG-------RKVAIVTPQRQMKAEMIE---------------MVERNAEYELARTQRFADRNAQAMLDLAAILDLPELPRRIEGYDISHIQGSDAVASQVVFIDGLPAKQHYRHYKIKTPTVVSGHSDDFASMAEVIRRRF---RKYAALKEKGELVRASQDSVLSRHVSATADFPDLVMIDGGKGQLSAVV 513
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Match: A0A7C3PBS7_9CYAN (UvrABC system protein C n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PBS7_9CYAN) HSP 1 Score: 240 bits (612), Expect = 6.670e-66 Identity = 175/548 (31.93%), Postives = 252/548 (45.99%), Query Frame = 1
Query: 1 PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRVLPLRKRHRPLYKDKPCLNYDIGICPGACQKLISENVYTETVRLAEMVFRGQGGELLERLRQRMERASRAEEFEKAGEYKEQMALVRGGLLGSALHFSPGSGAIAXXXXXXXXXXXXXXXXXXXXXMVGVRGKARGKGKLKAAVAVVERRDVVAVGLAGNLACFQVFRVREGRLIGRLGFTYRVEERGLTRGEVLQACLERYWGDALASTFSSSSLSEGRSSQQSAEGSGKKEGAAENRGEVFADIPDEVVTADALPEGGAELLSELLSEAKVTFNAKDSASAHVAAAAADKAKTDGAQQRKGRTKGDTGDSARTERSIIRPLFLSLPAVVRIVHDEGTGERHHLCVMVSKNAELEARRLLKGSEGIAEGLEQLARMLGLSSPPARIEGFDVSHTAGGQAVASSVSFVDGKADKRGHRRYRIKTIDVKKGHSDDYASLKEVVTRRFFPPRAGAYTGNDADVDPXXXXXXXXXXXXPIKQLPDLVLIDGGKGQLAAAVK 1644
PY+C TWSE YPR+ +T+ R ++DRYYGP+VD G LR T+ LV+R+ PLR+R +PL++D+PCLNYDIG CPG CQ+LIS Y + V+ MVF+G+ EL++ L +ME+A+ FE+A ++Q+A ++ L + S ++ RD +A+ + AC Q+F++R GRL+GRLGF + + T GE+LQ LE ++ A +IP E++ LPEG ++L+E L+ Q KGR +T+ +I MV +NA E R K ++ A+ L+ LA +L L P RIEG+D+SH G AVAS V FVDG K+ +R Y+IK V+ GHSDD+AS+ EV+ RRF A G + V P + PDL++IDGGKGQL+A V+
Sbjct: 123 PYLCITWSEDYPRIFITRKRRMH---KKDRYYGPYVDVGLLRRTLHLVKRIFPLRQRPQPLFRDRPCLNYDIGRCPGVCQRLISPEDYHKIVQKVAMVFQGRTKELVDILATQMEQAAENLNFEQAARIRDQIAGIK--TLAADQKVSTADDTVS--------------------------------------------RDAIALAADEHHACVQLFQIRAGRLVGRLGFL--ADAQSGTPGEILQRVLEEHYQMVEA-----------------------------------VEIPTEILVQHELPEG--DMLAEYLT------------------------------QTKGRKVTVFNPQRQTKAELIE--------------------------MVERNAAYELARTQKFADRNAQALQDLAVILDLPDMPRRIEGYDISHIQGSDAVASQVVFVDGLPAKQHYRHYKIKNPTVRAGHSDDFASMAEVIGRRFRKYAAAKARGEE--VRPERDPSVLSRHVNALSDFPDLIMIDGGKGQLSAVVE 524
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Match: A0A7C9TV54_9CYAN (UvrABC system protein C n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TV54_9CYAN) HSP 1 Score: 238 bits (607), Expect = 2.160e-65 Identity = 182/548 (33.21%), Postives = 261/548 (47.63%), Query Frame = 1
Query: 1 PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRVLPLRKRHRPLYKDKPCLNYDIGICPGACQKLISENVYTETVRLAEMVFRGQGGELLERLRQRMERASRAEEFEKAGEYKEQMALVRGGLLGSALHFSPGSGAIAXXXXXXXXXXXXXXXXXXXXXMVGVRGKARGKGKLKAAVAVVERRDVVAVGLAGNLACFQVFRVREGRLIGRLGFTYRVEERGLTRGEVLQACLERYWGDALASTFSSSSLSEGRSSQQSAEGSGKKEGAAENRGEVFADIPDEVVTADALPEGGAELLSELLSEAKVTFNAKDSASAHVAAAAADKAKTDGAQQRKGRTKGDTGDSARTERSIIRPLFLSLPAVVRIVHDEGTGERHHLCVMVSKNAELEARRLLKGSEGIAEGLEQLARMLGLSSPPARIEGFDVSHTAGGQAVASSVSFVDGKADKRGHRRYRIKTIDVKKGHSDDYASLKEVVTRRFFPPRAGAYTGNDADVDPXXXXXXXXXXXXPIKQLPDLVLIDGGKGQLAAAVK 1644
P++C TWSE YPR+ +T+ R +DRYYGP+VD GQLR+T+ ++R+ PLR+R +PLYKD+PCLNYDIG CPG CQ LI+ Y +TV MVF+G+ E + L ++ME+A+ FE+A ++++A ++ L GS S I+ RD +A+ + AC Q+F++R G+L+GRLGF + GE+LQ LE ++ + +IP E++ LPE AE+L++ LS KGR + +I+ P S + L MV +NAE E R+ + S+ A+ ++ LA +L L P RIE +D+SH G AVAS V F+DG K+ +R Y+IK +V GHSDD+ASL EV+ RRF A G + ++P XXXXXXX P + PDLV+IDGGKGQL+A V+
Sbjct: 113 PFLCITWSEKYPRIFITRKRQLRHS--KDRYYGPYVDSGQLRNTLQQLKRIFPLRQRPQPLYKDRPCLNYDIGRCPGVCQGLITPEEYRQTVEKVAMVFQGRIAEPIAMLTKQMEKAAEVLNFEQAARIRDRIAGLKA-LAGSEQKVSLPDDTIS--------------------------------------------RDAIALASSEQYACIQLFQMRAGQLVGRLGFVAEAAD----TGEILQRVLEEHYQNVEP-----------------------------------VEIPAEIIVQQELPE--AEILADWLSS------------------------------HKGR-----------KVTIVAPQRQS---------------KAELIAMVERNAEYELARMQRASDRNAKAMQDLAELLDLPELPHRIECYDISHIQGSDAVASRVVFIDGLPAKQHYRHYKIKNPEVYAGHSDDFASLAEVIGRRFREYAANPEDGEN--LEPESAXXXXXXXSRP-QDWPDLVVIDGGKGQLSAVVE 513 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28670.7815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig28670.7815.1 >prot_H-paniculata_contig28670.7815.1 ID=prot_H-paniculata_contig28670.7815.1|Name=mRNA_H-paniculata_contig28670.7815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=729bp PYVCFTWSESYPRLIVTKDRPRAGGGEQDRYYGPFVDPGQLRSTVALVRRback to top mRNA from alignment at H-paniculata_contig28670:144..2444- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig28670.7815.1 ID=mRNA_H-paniculata_contig28670.7815.1|Name=mRNA_H-paniculata_contig28670.7815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2301bp|location=Sequence derived from alignment at H-paniculata_contig28670:144..2444- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig28670:144..2444- >mRNA_H-paniculata_contig28670.7815.1 ID=mRNA_H-paniculata_contig28670.7815.1|Name=mRNA_H-paniculata_contig28670.7815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4374bp|location=Sequence derived from alignment at H-paniculata_contig28670:144..2444- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |