mRNA_H-paniculata_contig2867.7813.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2867.7813.1
Unique NamemRNA_H-paniculata_contig2867.7813.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Match: A0A0G4GX11_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GX11_VITBC)

HSP 1 Score: 110 bits (274), Expect = 2.810e-24
Identity = 80/236 (33.90%), Postives = 114/236 (48.31%), Query Frame = 3 
Query:  309 PNLRLFKRHSDRSISAYMSEIADRPFNHQHVSITELHPPVRSPSSLRVPTGMKVNARRQLLGRGRQVYERAVEKGLRERGVVDHLSWAKLPVADTDSRRWKPGMALLTVAKCYGVVWSANPCRLVHAYWDRNLPRDMGRGK-YSSVCFSTVVGHLLAGEERFSVEWHQSD--------------------------------DSVWLDLFSVSEGNGILGKIATPLVRPISKRFFA 917
            P L++ +RHSD +I   +  I  RP NH  V  T L    R P+S   P+   VN +R L+G G + Y  A    L  + + + L W ++       RR   G A+ T AK YGV  + NPC   +   D+   R  GR   Y++V +STV GHLLAGEERF+V W+Q+                                 D VW +++S S  +G+LG++A   VRP+ +RF A
Sbjct:   31 PMLKVGQRHSDDAIFDALGTIKGRPPNHPFVRGTLL----RYPTSSMAPSSYMVNHKRFLIGHGEKAYHFASRALLSWQLINESLEWIRI------DRR---GEAVTTCAKAYGVS-AINPCLYQYELIDQRAARPSGREVVYTAVGYSTVKGHLLAGEERFTVAWNQTPRKGGPVSRIFGLRKQRPANDSDSEGDGIESEKDGVWFEVYSYSRPSGVLGRLAAVAVRPLQRRFAA 252
[Close]
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Match: A0A7W1QZ35_9BACT (DUF1990 domain-containing protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1QZ35_9BACT)

HSP 1 Score: 100 bits (248), Expect = 2.330e-21
Identity = 66/208 (31.73%), Postives = 94/208 (45.19%), Query Frame = 3 
Query:  324 FKRHSDRSISAYMSEIADRPFNHQHVSITELHPPVRSPSSLRVPTGMKVNARRQLLGRGRQVYERAVEKGLRERGVVDHLSWAKLPVADTDSRRWKPGMALLTVAKCYGVVWSANPCRLVHAYWDRNLPRDMGRGKYSSVCFSTVVGHLLAGEERFSVEWHQSDDSVWLDLFSVSEGNGILGKIATPLVRPISKRFFAAQCHHMLKLV 947
            F   SD  I  +++E  D PF++  V            S   +P+G  +N  R  +G G   + RA  K   +   +  L W +L  + T          ++ V   +G  WS NPCR+++   ++      G        F T+ GH   GEERF VEWH +DDSVW +LFS +  + IL KI  P VR   +RF       MLK V
Sbjct:    4 FSEPSDAQIENFLAEQRDLPFSYGEVGA----------SQNTIPSGYPINHHRVQIGNGDNTFARA--KNAIQNWAMYELKWTRLYPSHTPVA----AREVVCVVVNHGFCWSLNPCRIIYTLEEKGEVERFG------FAFGTLPGHSEEGEERFVVEWHHADDSVWYELFSFARPHHILAKIGFPFVRLTQQRFGKDSEGAMLKAV 189
[Close]
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Match: A0A521XCS0_9PROT (DUF1990 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XCS0_9PROT)

HSP 1 Score: 95.9 bits (237), Expect = 8.510e-20
Identity = 68/208 (32.69%), Postives = 107/208 (51.44%), Query Frame = 3 
Query:  321 LFKRHSDRSISAYMSEIADRPFNHQHVSITELHPPVRSPSSLRVPTGMKVNARRQLLGRGRQVYERAVEKGLRERGVVDHLSWAKL-----PVADTDSRRWKPGMALLTVAKCYGVVWSANPCRLVHAYWDRNLPRDMGRGKYSSVCFSTVVGHLLAGEERFSVEWHQSDDSVWLDLFSVSEGNGILGKIATPLVRPISKRFFAAQCH 929
            +F    D +I   +++++  P+++  V   E   PV        P G   +  R LLGRG   YERA  K    R  + HL W +L     P+A         G ++   A+  GV W+ N CR+V+   D+    D+ R  ++     T+ GH+L+GEERF+VEWH++DDSVW  + + S  + +L ++  P+VR + KRF A + H
Sbjct:    3 VFTTPGDGAICERLAQLSSAPYSYAEVGALEN--PV-------FPIGYLADRHRALLGRGAAGYERA--KAALRRWEMFHLGWVRLYPSAPPIA--------AGTSIGISARFLGV-WNLNFCRIVYTVEDKG---DVERFGFA---LGTLPGHILSGEERFTVEWHRADDSVWYHVCAFSRPDQLLSRLGYPIVRQLQKRF-AKESH 183
[Close]
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Match: A0A7V9KQX1_9BACT (DUF1990 domain-containing protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7V9KQX1_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 2.850e-17
Identity = 59/209 (28.23%), Postives = 101/209 (48.33%), Query Frame = 3 
Query:  321 LFKRHSDRSISAYMSEIADRPFNHQHVSITELHPPVRSPSSLRVPTGMKVNARRQLLGRGRQVYERAVEKGLRERGVVDHLSWAKLPVADTDSRRWKPGMALLTVAKCYGVVWSANPCRLVHAYWDRNLPRDMGRGKYSSVCFSTVVGHLLAGEERFSVEWHQSDDSVWLDLFSVSEGNGILGKIATPLVRPISKRFFAAQCHHMLKLV 947
            L ++ S  +I  ++S   + PF++  V  T          +  +P+   V+  R  LG G+++Y+RAV   L+     D L W ++   +T     K G  +  + + +G  WS N CR+V+   +       G        + T+  H+  GEERF++EWH +DD+VW D+ + S  N +L ++  PL R + KRF     + M + V
Sbjct:    3 LLRQPSPEAIRRFISSPRELPFSYPEVGAT----------ASELPSDYIVDHNRIKLGTGKEIYDRAVA-ALQNWKQFD-LGWVRMVPPETP----KVGAVVAILTRHFGF-WSLNACRVVYLIDEEGPVTKFG------FAYGTLSSHVERGEERFTIEWHSADDTVWYDILAFSRPNQLLVQLGLPLARMLQKRFARDSLNAMAEAV 188
[Close]
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Match: A0A2V9JA50_9BACT (DUF1990 domain-containing protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9JA50_9BACT)

HSP 1 Score: 87.0 bits (214), Expect = 1.460e-16
Identity = 57/153 (37.25%), Postives = 76/153 (49.67%), Query Frame = 3 
Query:  453 PTGMKVNARRQLLGRGRQVYERAVEKGLRERGVVDHLSWAKLPVADTDSRRWKPGMALLTVAKCYGVVWSANPCRLVHAYWDRNLPRDMGRGKYSSVCFSTVVGHLLAGEERFSVEWHQSDDSVWLDLFSVSEGNGILGKIATPLVRPISKRF 911
            P G  V+  R  LGRG   + RA E   R R  +  L W +L   DT  R    G  +  +A+ +G+ WS N CR+V+   +    R  G G      + T+  H   GEERFSVEWH  DDSVW D+ + S  N  L +   PL R + +RF
Sbjct:   35 PAGYTVDHHRVQLGRGAGDFARAAESLRRWR--MFELGWLQLFWPDTPIRA---GSTVAVLARTFGL-WSLNACRIVYVLEEDAPIRRYGFG------YGTLAEHAEQGEERFSVEWHSGDDSVWYDILAFSRPNQWLVRAGYPLTRRLQRRF 175
[Close]
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Match: A0A061RK60_9CHLO (Upf0548 protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RK60_9CHLO)

HSP 1 Score: 87.4 bits (215), Expect = 1.700e-16
Identity = 69/205 (33.66%), Postives = 97/205 (47.32%), Query Frame = 3 
Query:  378 RPFNHQHVSITELHPPVRSPSSLRVPTGMKVNARRQLLGRGRQVYERAVEKGLRERGVVDHLSWAKL----PVADTDSRRWKPGMALLTVAKCYGVVWSANPCRLVHAYWDRN--LPRDMG--------RGKYSSVCFSTVVGHLLAGEERFSVEWHQSDDSVWLDLFSVSEGNGILGKIATPLVRPISKRFFAAQCHHMLKLVS 950
            R FN++HV  T   PP+  P  LR      V+  R  LG G+ VY RA  K   +      L W  +    P+   DS+      ALL        VW+ NP ++V+        L    G        R +  S     + GHLLAGEERFSVEWH+ DDSVW ++++ S+   +L K   P+VR + K+F +     M++ VS
Sbjct:   24 RGFNYEHVGSTYSAPPL--PDKLR-DQNWNVDHTRVKLGSGKMVYRRA--KSAVQEWRHFQLGWTSVEPTTPILK-DSKVCVVARALL--------VWTRNPLQIVYVREGNREVLSASAGPDGSPATTRAEVYSFAHGCLGGHLLAGEERFSVEWHKDDDSVWYEIYTFSKPAHLLSKATYPIVRGLQKKFGSDSAKAMMQEVS 214
[Close]
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Match: I0YZW6_COCSC (DUF1990 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZW6_COCSC)

HSP 1 Score: 84.7 bits (208), Expect = 1.720e-15
Identity = 58/187 (31.02%), Postives = 91/187 (48.66%), Query Frame = 3 
Query:  387 NHQHVSITELHPPVRSPSSLRVPTGMKVNARRQLLGRGRQVYERAVEKGLRERGVVDHLSWAKLPVADTDSRRWKPGMALLTVAKCYGVVWSANPCRLVHAYWDRNL------------PRDMGRGKYSSVCFSTVVGHLLAGEERFSVEWHQSDDSVWLDLFSVSEGNGILGKIATPLVRPISKRF 911
            NH    ITE      S SSL+   G + +  R  +G+G+Q Y +A +        V       L   DT+    K G  ++ +A+  G++W  NP R+++A  ++ L            P    RG    +  +T+ GH LAGEERFSV+W + DDSVW +++++S    +L   + PL R   +RF
Sbjct:   31 NHNLTGITEF----TSGSSLK---GWQSDYDRVQVGKGKQAYRKAKD-------FVSEWQHMGLGWVDTNRPAVKVGEHVIVMAQVLGLLWMCNPLRILYAKEEKGLIPAAAMLRARRQPACTSRGLRFDLGQTTLEGHSLAGEERFSVQWSKEDDSVWYEIYAISRPATLLALASYPLTRYYQQRF 203
[Close]
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Match: A0A2V8FDR9_9BACT (DUF1990 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8FDR9_9BACT)

HSP 1 Score: 83.6 bits (205), Expect = 2.720e-15
Identity = 59/216 (27.31%), Postives = 95/216 (43.98%), Query Frame = 3 
Query:  327 KRHSDRSISAYMSEIADRPFNHQHVSITELHPPVRSPSSLRVPTGMKVNARRQLLGRGRQVYERAVEKGLRERGVVDHLSWAKLPVADTDSRRWKPGMALLTVAKCYGVV------WSANPCRLVHAYWDRNLPRDMGRGKYSSVCFSTVVGHLLAGEERFSVEWHQSDDSVWLDLFSVSEGNGILGKIATPLVRPISKRFFAAQCHHMLKLVSGE 956
            +R SD  I+A++   +   F++  V  T    P+          G  V+  R  LG G   ++RAV      R  + ++ W  L         W    A + + +C G++      WS N CR+++      +       +     + T+  H+ +GEERFSVEWH+ DDSVW DL + S     L ++  PL R + +RF       M++ V  E
Sbjct:    5 RRPSDGDITAFLDRQSRGSFSYAGVGGTRSSAPI----------GYNVDHNRVRLGEGEGAFKRAVAAV--RRWEMFNIGWVTLC--------WP--QAPIEIGQCVGILIPLYGLWSLNACRVIYT-----IDAAADEVRRFGFAYGTLADHMESGEERFSVEWHRGDDSVWYDLLACSRPRHPLARLGAPLSRSLQRRFARDSLQAMIRAVCHE 193
[Close]
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Match: A0A5A8BMJ8_9PLAN (DUF1990 domain-containing protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8BMJ8_9PLAN)

HSP 1 Score: 82.8 bits (203), Expect = 5.380e-15
Identity = 64/214 (29.91%), Postives = 95/214 (44.39%), Query Frame = 3 
Query:  321 LFKRHSDRSISAYMSEIADRPFNHQHVSITELHPPVRSPSSLRVPTGMKVNARRQLLGRGRQVYERAVEKGLRERGVVD----HLSWAKLPVADTDSRRWKPGMALLTVAKCYGVVWSANPCRLVHAYWDRNLPRDMGRGKYSSVCFSTVVGHLLAGEERFSVEWHQSDDSVWLDLFSVSEGNGILGKIATPLVRPISKRFFAAQCHHMLKLVS 950
            L +    R I  ++   A + F +  V  T      R+ S+   P G +V+  R  LG+G  VYE+A      ++ + D       W  L   D        G  +  +A   G+ W  N CR+V+   +      + R  ++   + T+  H   GEERF VEWH  DDSVW DL++ S  N +L KIA P VR   K+F       M + V+
Sbjct:    4 LIRMPDSRQILQFIESQAQQDFTYSQVGAT------RNQSA---PAGFRVDHNRICLGQGAVVYEQA------KQALTDWQHYRFDWLHLYRLDAPPAA---GQTVAALAHVLGI-WVLNACRIVYVLEETE---PLTRFAFA---YGTLPDHAECGEERFQVEWHPDDDSVWYDLYAFSRPNTLLSKIALPYVRSKQKQFARESLQAMHQAVT 192
[Close]
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Match: A0A518A996_9PLAN (DUF1990 domain-containing protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A996_9PLAN)

HSP 1 Score: 80.9 bits (198), Expect = 2.590e-14
Identity = 54/171 (31.58%), Postives = 79/171 (46.20%), Query Frame = 3 
Query:  453 PTGMKVNARRQLLGRGRQVYERAVEKGLRERGVVD----HLSWAKLPVADTDSRRWKPGMALLTVAKCYGVVWSANPCRLVHAYWDRN-LPRDMGRGKYSSVCFSTVVGHLLAGEERFSVEWHQSDDSVWLDLFSVSEGNGILGKIATPLVRPISKRFFAAQCHHMLKLVS 950
            P G +V+  R  LG+G  VYE+A      ++ + D       W  L   D        G  +  +A+ +G  W  N CR+V+   +    PR        +  + T+  H   GEERF VEWH  DDSVW DL++ S  + +L +IA P VR   K+F       M + V+
Sbjct:   38 PAGFRVDHNRICLGQGAAVYEQA------KQALADWQHYRFDWLHLQRPDAPPAA---GQTVAALAQVFGF-WVLNACRVVYVLEESEPFPRF-------AFAYGTLPAHAECGEERFQVEWHPDDDSVWYDLYAFSRPHTLLSRIAFPYVRSKQKQFARESLQAMQRAVA 191
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2867.7813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0G4GX11_VITBC2.810e-2433.90Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7W1QZ35_9BACT2.330e-2131.73DUF1990 domain-containing protein n=2 Tax=Acidobac... [more]
A0A521XCS0_9PROT8.510e-2032.69DUF1990 domain-containing protein n=1 Tax=Betaprot... [more]
A0A7V9KQX1_9BACT2.850e-1728.23DUF1990 domain-containing protein n=1 Tax=Pyrinomo... [more]
A0A2V9JA50_9BACT1.460e-1637.25DUF1990 domain-containing protein n=2 Tax=Acidobac... [more]
A0A061RK60_9CHLO1.700e-1633.66Upf0548 protein n=1 Tax=Tetraselmis sp. GSL018 Tax... [more]
I0YZW6_COCSC1.720e-1531.02DUF1990 domain-containing protein n=1 Tax=Coccomyx... [more]
A0A2V8FDR9_9BACT2.720e-1527.31DUF1990 domain-containing protein n=1 Tax=Acidobac... [more]
A0A5A8BMJ8_9PLAN5.380e-1529.91DUF1990 domain-containing protein n=1 Tax=Gimesia ... [more]
A0A518A996_9PLAN2.590e-1431.58DUF1990 domain-containing protein n=3 Tax=Gimesia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2867contigH-paniculata_contig2867:1108..8107 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.2
Seed ortholog evalue5.8e-18
Seed eggNOG ortholog2903.EOD17666
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Domain of unknown function (DUF1990)
EggNOG OGs2E8GY@1,2SEZ2@2759
Ec32 ortholog descriptionDomain of unknown function DUF1990
Ec32 orthologEc-12_008030.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1095
Cds size765
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2867.7813.1prot_H-paniculata_contig2867.7813.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2867 1235..7904 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929871.9212494-UTR-H-paniculata_contig2867:1107..12341622929871.9212494-UTR-H-paniculata_contig2867:1107..1234Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2867 1108..1234 -
1691481048.4292223-UTR-H-paniculata_contig2867:1107..12341691481048.4292223-UTR-H-paniculata_contig2867:1107..1234Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2867 1108..1234 -
1622929872.0482645-UTR-H-paniculata_contig2867:7904..81071622929872.0482645-UTR-H-paniculata_contig2867:7904..8107Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2867 7905..8107 -
1691481048.496928-UTR-H-paniculata_contig2867:7904..81071691481048.496928-UTR-H-paniculata_contig2867:7904..8107Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2867 7905..8107 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929871.9402516-CDS-H-paniculata_contig2867:1234..13301622929871.9402516-CDS-H-paniculata_contig2867:1234..1330Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 1235..1330 -
1691481048.4389884-CDS-H-paniculata_contig2867:1234..13301691481048.4389884-CDS-H-paniculata_contig2867:1234..1330Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 1235..1330 -
1622929871.9624448-CDS-H-paniculata_contig2867:2449..26021622929871.9624448-CDS-H-paniculata_contig2867:2449..2602Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 2450..2602 -
1691481048.4466448-CDS-H-paniculata_contig2867:2449..26021691481048.4466448-CDS-H-paniculata_contig2867:2449..2602Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 2450..2602 -
1622929871.9739292-CDS-H-paniculata_contig2867:4521..46461622929871.9739292-CDS-H-paniculata_contig2867:4521..4646Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 4522..4646 -
1691481048.454398-CDS-H-paniculata_contig2867:4521..46461691481048.454398-CDS-H-paniculata_contig2867:4521..4646Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 4522..4646 -
1622929871.9919593-CDS-H-paniculata_contig2867:5101..51891622929871.9919593-CDS-H-paniculata_contig2867:5101..5189Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 5102..5189 -
1691481048.4669356-CDS-H-paniculata_contig2867:5101..51891691481048.4669356-CDS-H-paniculata_contig2867:5101..5189Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 5102..5189 -
1622929872.013551-CDS-H-paniculata_contig2867:5867..60191622929872.013551-CDS-H-paniculata_contig2867:5867..6019Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 5868..6019 -
1691481048.4776423-CDS-H-paniculata_contig2867:5867..60191691481048.4776423-CDS-H-paniculata_contig2867:5867..6019Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 5868..6019 -
1622929872.0339007-CDS-H-paniculata_contig2867:7753..79041622929872.0339007-CDS-H-paniculata_contig2867:7753..7904Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 7754..7904 -
1691481048.487389-CDS-H-paniculata_contig2867:7753..79041691481048.487389-CDS-H-paniculata_contig2867:7753..7904Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2867 7754..7904 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2867.7813.1

>prot_H-paniculata_contig2867.7813.1 ID=prot_H-paniculata_contig2867.7813.1|Name=mRNA_H-paniculata_contig2867.7813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=255bp
MWSSPSFGIAVVSAALALAVAHAIEARVEAGRVWFPNLRLFKRHSDRSIS
AYMSEIADRPFNHQHVSITELHPPVRSPSSLRVPTGMKVNARRQLLGRGR
QVYERAVEKGLRERGVVDHLSWAKLPVADTDSRRWKPGMALLTVAKCYGV
VWSANPCRLVHAYWDRNLPRDMGRGKYSSVCFSTVVGHLLAGEERFSVEW
HQSDDSVWLDLFSVSEGNGILGKIATPLVRPISKRFFAAQCHHMLKLVSG
EEDA*
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mRNA from alignment at H-paniculata_contig2867:1108..8107-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2867.7813.1 ID=mRNA_H-paniculata_contig2867.7813.1|Name=mRNA_H-paniculata_contig2867.7813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7000bp|location=Sequence derived from alignment at H-paniculata_contig2867:1108..8107- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCGCGGTCTGGGGATACACATGCGAAGTTTGCAAGTGAACAAGCACTAA
CTAAACCTGCACGGTACCAGGTAGCTCACACATTCGTCGGGCTTTCGGCT
CGACGCAAAGCACGAATCTGTCGACAGGCACGGACTAGCCTACGGGGAAC
ATAATTCTGAAAAGACTACTGTGAAGTGACGATTGGTGCAGCCAATAGGT
GCAATGTGGAGCAGTCCCTCGTTTGGGATAGCGGTAGTTTCTGCTGCTCT
AGCCCTAGCCGTGGCTCACGCCATCGAAGCACGGGTGGAGGCAGGGAGGG
TATGGTTCCCTAATCTTCGGCTGTTCAAACGCCATTCTGATCGATCTATA
TCAGGTATGAACAACCAGACAGTTATGAACGCGGATACTTTTTATATATT
GTACTGACGAAGGTGTACCCTCGTTGCGCCGTCACAGACGCGCATCGTTG
GATAAAAAGATACCAGGTATATATATATATATTGATTTTGAGAGGGGCCG
AGTGTCTGTTTTGAACGAAGACAACATAGAGGTGCAAGTACAATTGGGTT
CGTGCAGCAGCAAACAAGTTCGTATCTATATTCCATGATACATGGTACCC
GAGATTGCACCCTCTCTGGGCTCTGGAGTGGCATGTACTAATTGCACACT
GTTATCAACTAAGTGGCAGTTTGAAAACTGGCTCTATTTCCTCGTCGGCA
AAAAGTACACCGCTTTAGAGCAGGTCCTTGCCTCTCAGTACCAGATAACA
TACTTCGCACCCACCCCTATTAGACATATATAAATTCAGGAATGTATGGA
TTTCGGTCATTTTTCTCGCTTCTGAGGTGGTCTCTTATCGGAGTAGTCTT
TTATCGGGACCATTTTGGTGGAACTGTAGTCCAATACAGTTAATCTCAGT
TCGTCCTCAAATTCCCATGACTGAGCACTGAACATCGCCTGTCTTGTTTG
TGCAGTGGTGCAGATGATAATCCCGACGCCAACTTTAATATACCTACCCG
TTGCGCGCTGCGCAGCGGCGCAGCATTTGGCTGATTTTAGGTACTACCGG
GCTCCAATTGACACCGCGAGAGTGTCAAGATTAGAATACGAAAGTGGGAG
CTCGCCTAAAAAACGACTAGAGGCTGCCCGACTAGAGATTGTTCGAGAAA
TTTTGGGGACTTTTCGGGACAATGACACGAATCATAGAGCTCCGCCAAAA
TGGTCGACGCACGTAACATAAATGAAGTCCAAAAACACAGCATTCAACCC
CTATACCCCCGAGCCCGAAAAAGAACAGTAAAGGCATCTAATAGTCTCGC
TGCGAAACCACCACGATTGGGGGGGAGGGTCCCTTTCGACGACGACGGGG
GGATGGAGACCGACCTCATAGTGCTTGAGTATGGCAGCGGATTGTACACA
AAAAAGGTAGGTTCAGGCCACTCATGCACATTTATTCACCCAACAACGGC
CAATCAAAAATGTGACCCCTCCTGTACATCAGTCAAATTATTTTGGGGGT
CACAGAATACCTGCGCTATACCTCCGGCGGTTTAGGGGGGTCGAGGAAAA
CGTGTAGACTTGGGTTATTTCATTTGGCCTGGTGTATTTTTTTTGGACGA
CGACGTCTCTTTGTTGGTCTGGTTGTGTTTTGTGAGCGCGGAAGACGAGG
GCGATGGCAATACATGGCGTGCCTGCACATCCTATCGAAAGTAGCATATG
AAACGTTTCGCTCGTGGGCTATCCAAGTATGTGTCATCTGCGCACGAAGG
CAGGCCGTGTTTCAACTATGTACTGCATAAGAACAAATCCACTCATTTCT
GCTTCGAAAAGGCGCATTGAATGCCAACTCGATACGCACACGGAATTCTG
AACACATCACACAGAGAGCGAGAGCTTCAGTTCTTGATGTAAAAAAATAT
CGTGCAGCACTTGGACATGTTGGTAGACGTACGGATGAGTTTGGTTGCCT
GCGCACGATGTTGTGATCATCTCCCCCCAAATTTGGTTGTTTTTTACCCT
TTTCTCCCATGAACAAAGCGTGAGCGCTCGTCCGTGCTACTTGCTCTTCG
TTGCCTTTTCGACAAATGTTTTCTACAAATGAAATCAGCGTACATGTCCG
AGATCGCCGATCGGCCCTTCAACCACCAACATGTGTCCATCACCGAGCTG
CATCCGCCAGTCCGTTCTCCCTCGTCGCTGCGCGTGCCGACTGGGATGAA
AGTCAACGCTCGTCGGCAGCTGCTGGGCAGGGGACGTCAGGCAAGACTTT
TGCTTGTTCGGCATGTACCGCATCGCGTAATGTTTTTTGAGAATTTTCAC
TCGTTTTGTGTTTTCATCATTTGCCTTCCAGCGATGTTCGCACATACACA
CACGCTGGAAATCGTGCATGTTCTTCTCTCTCCGTCGCTTTGCAAGGTTT
TCTGGTCCAGGGCGTACCATGATCTCGTTCTGATTTCTTCCTTGATTTAC
TTTATACATGCGTTGGGCTATATCTTGCCGACCAAGATGCTCCACGCGCT
CAAAACCAAACGCCGAGGAGCGCATGCACGCTTTCCCTAGTCAGTGAAGT
AACTCATTGCCCTATACCATGCCACATGGCCCCGCCGCTGTAATGGTCAT
TTTTTGTCTGTGCTTATAGATTATGTCGTCCTGATTTTGCTATGCAGAGT
ACAGGTATCTGACTAAGGTACTCTAGTTAATATGCTTCCTGTGAGTATTA
TGTACCTCAAGTTATCCAGGGACTGCTTCTTCCGTTTGGAGTTCTACGGG
TGATATTTAGGAACCTTATTTAACTTAGGCATTTCAAGTCGATAAGATCG
TACCTAAGATTTTTTGCGTATCACCCAACATTCTTCTTGTCTGTATCATG
CTTTATTCCCCGCGCGTTTCGTTTCACCAACACCAACACCCTGATTTGCC
GAGGGCTATCGTGAGCAGGTGTACGAGCGCGCGGTGGAAAAAGGGCTTCG
GGAACGCGGCGTGGTTGATCATCTCTCTTGGGCGAAGTTGCCTGTCGCCG
ACACAGGTACCCACATACAATGTTGTCCTCTTCGGCGTGCGTGTCCAAAC
TCTAATGTTTTGTTGATTGAGCAACTCGCTCATTAGTAGTAGCATATTTT
CGGAGTACTATAGTTCATTGCGACGAAGTGAAGCCAATTTTGGCATGCTG
ATGGCGGGCATCATCTAAAAGTTTATTGTACGTGAGAGCATCGATCGAGC
TGTGGTGTATATTTTGCGGTGACAAAAACGTTTTCGTCGGGCAACTGTTG
CTCGCCCGTATAATTCCAGCCGTTTAGTTCATCGTCTGTTCGATTTTTCA
TTTTCATATATTTTATGTAATCATTTTTTGCCTTCTCCTCTCCACCTCTC
TCTTGCTACCCTATTTTTTTGCACTATGAACGATAATAACACGCCTTCTA
ACAATATAGCTCCTCTGTGACTGCCCATTCTGGTTTTGCGCGCGTGCGCG
TACCTGCCAAGATTCTAGGCGATGGAAACCGGGCATGGCACTCCTCACGG
TCGCCAAGTGCTACGGTGTAGTGTGGTCTGCAAATCCGTGCCGGTTGGTT
CATGCCTATTGGGATAGGAATCTTCCCCGAGATATGGTAAGGATGGCGTT
GAGAAAACAGTAGGGCTGTGTGTCGAGTGTTTAGAACGATACTTAGATTA
TAGGTAAGAGCGAAGCGAGCCAGCTGCGCAAAGCGCCAGGCGAGCGCTTA
AGCGCGAGCCAAGACGGCCGCACCCGACTAGTGAGGGGGCCTCGCTGAAG
GCACCGCCGGAGGCTGATAAAATACGCGTCTTGTATTCGCTAGGTGTTTC
GATGATGACTACAGCATGTACACGTTCCCCGGATAATGACTTCAGTAACT
GGGGCAAAAACAGCGATCCATCGTTTCGACCGCCAATTGATACACACACA
TACACAAACACACAAACACACACACACAAACACACACACACACACATATA
TATATCGTTTCGTATTGCCCAATATACGATATGTCGCTGATATATCAGCG
CCGATACAAAGCCCTAAAAACGTAGGATTGATCTGGGTAAGTCTTGTGGG
AGGGGCGAGGGCGAGGGAGAAGATGTGTATTTCAGTTTTGTTGAGCGGAT
AAGCCTAAAAACACAGAAAAGAGCTAAACGCGACGAGGAGGTTGGAGTGG
TGGCTAGCTTTCCGACCGTGTGTGTGTCCCGCCCATGCCGGAGCCTTTAG
GAGCGTATCCAGTATAGACTAATCTTCCAGGTAATTCTATGGTTCTGGTG
TTTTACATGCGTCTCCGTTCCACCAGTTAATTGATCGAGCAGTGCATACC
TGATTTTGTATGTCCGAGAATTTTCATGAAAATGTGGGTGAATAATCACA
CTGATACGGTGTGTTGAATTTCCAAGTGCCTAGATCGATATATTATACTT
TTAACGGCTTTTTGGATTCGATGCAGGTTGATAGTCGAGGCAATGCGGCA
ATCACAGGTAGCATAGTAGCGGTTAAACTCATTTTTTGTCTAGGTTTCGA
TCATCCTCAGCAGATCAAACCGTTTTCACCGTTTGTGCGGTTACACGATT
AAGCACCTTGTCGTGTTATCCGTCGTGAGCAGGATCCACACGCTCTCCCG
CCGATAAAAAGGAAGGATGGTCACAAGGTATATTTTATTGGGTTTTTTAT
GTTAAAGATCCCCGATTGCAGTCTATGAGTGATCGTTTGCAGTGACCTGT
GTGTGAGACCACAAGTCTTCAAGTTTCCTATGACTCTTCCGTTCAATGAC
ATTCTCACAATACAAAGCAATCTCATGTTCAATATCCCTTCTTTCAACCC
TCAATCATTTGTATGTTGTCCAGCTTATTTTGAGAGTTTCTCCACCCATG
CACGTTGGCCTCTTTGTCCTTTGGCTCTTTTGTCCATGTCCATTTCCTGG
CAGATTTCAACCGCAGCTCACTCTACGTTACTGTTAACCCATGCTTGAAA
ATCCATCCGTCGCATACACTTGAACTTTTAACCGTCATAATACAACTTAA
ACATCGCCTACCAACGTGTGCGGCTTTGCATCTTTGAACAACCCTAAAAG
CTTCGTTGCAATCAAGTTGAATTACTTCGTTGTTCTACATACGTGAATGC
TTACATGCGCTTATAATCCAAACATATTTTGTGCGTATCATGATTATTTA
TTGACTGCTATTGTTACAGCAGATACTTTGACAGACGCTCTGCCTCTACA
AGTATTCAATCAGTCCTCTTAGGTTCAGTTATATGCTTCAACTGTAAACA
GATACATTGTTCCTATTTTTCTATGAAGTGTGTACATATGGAACGGTCAG
AAGTTTAGTCACATGGTAGACGCGAGAATAATTTTGATAGTATAAACCAG
TATCAACTGAAAAAATTCAACACGGTGAACATCCTCCCTCCCTTCCTCAC
CCCCCCCCCCCAGCGTACGCGCCGACACCTGGTGTCTCTCCTGCTCACAA
TAACCTACCTTCGCATTCGCTCCCTAACAAACTACATATTATTGTTTTGC
AAAAGGGGAGGGGGAAATATTCAAGTGTTTGTTTCTCTACTGTGGTTGGA
CATCTATTGGCGGGAGAGGAGAGATTTAGCGTCGAGTGGCACCAGAGCGA
CGACTCTGTTTGGTTGGATCTTTTTTCTGTGTCCGAGGGCAACGGCATCC
TGGGCAAGGTAACAGAAAGTACCGCGCGCGGCCGCTATTGCTCTTCGATG
GCCGCGTTTTCATGTTCGCCATGGTTGATCTAGATACGTTTCGGTAGATT
GTTGTTCGGTTTTGGTGTTCTATCGTGTTTTTTCGCTTATTTCTCTGCGC
CCTCTCAGTTGCAAGCGTTTGTGAGTTTTGCCCCTCATGTGAACAACGTA
TTTTGGTAGTAGTGCGGTTGTAGTCAAGGGACGGGTACGCCGACTTTTGC
TAGGGGTACGCACATATATTTGGCATTTTACGTTATACTGCTACTGTTTC
CTCCTTTGGCTTGTGCGTCTTTTAGTGTCATTAAAAGAAATGAAATAAAC
TATGTGTGTAGTGATGATAACGTCTCAAAACTACCGCAGACCATCTTGCC
GCATCAATGATCTTTCCGAGGGCTAATCCCCTCTTTCCCAAACGAAGGAT
ACGTCGATATTTCGCTAAGACCTATGAGTGAGTTCGAGCGAGAGCACGAT
GGTAAATATGTAGACGCTAGCGTTAAACCGAGAATTGTCGCGATATCTAC
TCTTGGTATCTATTTAACAAAACACCTGGAACCAAAGGTCCCACTCGTGC
AGCATTGCAAGCTAACTTGGTATTATGTTCAGCCTAAAGATCATTCAACT
ATTTCGCACATCGCAGTCCTTTCACCTGTCCCGATGTTACCTGTTGTGTT
GCAGCGAGTAGATGTGTGGTTCGAAGCCTTGTTGCATGCTTGTTGGTGTG
TGTCAATGATTTTCTTTTTGAATATCTGTTGATGGGCTAGTTATCGTCGA
GAATCACTTGACATGCAAGCTGGACCTGGCTGGCTGTGTAATCCCTCAGT
TTTTTCAGCGAAGTACTGAATTTCATGTCTTTAGCTGCGGTTGGTTCGAC
GCTATTCATGAATGGGACGCAGGCGGGCACAGCTGCTTTATAGGGCCACA
AAGAAGTGAACTTGAAAAAGGTCAAGAGGACAACGTCGGTTCGGGCGTTG
TTGATTTTTAGGTTACCGTGTCGTGATCGACCATTTGCCCGCGTTTACCC
TGTAAACTGAGCCCCGCTTACTTAATGCACTTGCTGGCTCACGACCCATT
CGATTGCGCGCTCGAATGGGCCCACAGATTGCCACGCCACTGGTGAGACC
GATCTCCAAGCGGTTCTTCGCGGCGCAGTGCCACCACATGCTGAAATTAG
TGTCAGGAGAGGAAGACGCATGAGAGCAAAAGGAGGAGAGAAACGCCTTT
AAAGTGTCAAACCAAGATATTGCGATCTTGCTAGTACTGTACGTTTCAGA
TGGAAAATCCAAACACTGGCGAACAGCCATCTCATGTTGCTAATTATAGC
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Coding sequence (CDS) from alignment at H-paniculata_contig2867:1108..8107-

>mRNA_H-paniculata_contig2867.7813.1 ID=mRNA_H-paniculata_contig2867.7813.1|Name=mRNA_H-paniculata_contig2867.7813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1530bp|location=Sequence derived from alignment at H-paniculata_contig2867:1108..8107- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGGAGCAGTCCCTCGTTTGGGATAGCGGTAGTTTCTGCTGCTCTAGC
CCTAGCCGTGGCTCACGCCATCGAAGCACGGGTGGAGGCAGGGAGGGTAT
GGTTCCCTAATCTTCGGCTGTTCAAACGCCATTCTGATCGATCTATATCA
GATGTGGAGCAGTCCCTCGTTTGGGATAGCGGTAGTTTCTGCTGCTCTAG
CCCTAGCCGTGGCTCACGCCATCGAAGCACGGGTGGAGGCAGGGAGGGTA
TGGTTCCCTAATCTTCGGCTGTTCAAACGCCATTCTGATCGATCTATATC
AGCGTACATGTCCGAGATCGCCGATCGGCCCTTCAACCACCAACATGTGT
CCATCACCGAGCTGCATCCGCCAGTCCGTTCTCCCTCGTCGCTGCGCGTG
CCGACTGGGATGAAAGTCAACGCTCGTCGGCAGCTGCTGGGCAGGGGACG
TCAGCGTACATGTCCGAGATCGCCGATCGGCCCTTCAACCACCAACATGT
GTCCATCACCGAGCTGCATCCGCCAGTCCGTTCTCCCTCGTCGCTGCGCG
TGCCGACTGGGATGAAAGTCAACGCTCGTCGGCAGCTGCTGGGCAGGGGA
CGTCAGGTGTACGAGCGCGCGGTGGAAAAAGGGCTTCGGGAACGCGGCGT
GGTTGATCATCTCTCTTGGGCGAAGTTGCCTGTCGCCGACACAGGTGTAC
GAGCGCGCGGTGGAAAAAGGGCTTCGGGAACGCGGCGTGGTTGATCATCT
CTCTTGGGCGAAGTTGCCTGTCGCCGACACAGATTCTAGGCGATGGAAAC
CGGGCATGGCACTCCTCACGGTCGCCAAGTGCTACGGTGTAGTGTGGTCT
GCAAATCCGTGCCGGTTGGTTCATGCCTATTGGGATAGGAATCTTCCCCG
AGATATGATTCTAGGCGATGGAAACCGGGCATGGCACTCCTCACGGTCGC
CAAGTGCTACGGTGTAGTGTGGTCTGCAAATCCGTGCCGGTTGGTTCATG
CCTATTGGGATAGGAATCTTCCCCGAGATATGGGGAGGGGGAAATATTCA
AGTGTTTGTTTCTCTACTGTGGTTGGACATCTATTGGCGGGAGAGGAGAG
ATTTAGCGTCGAGTGGCACCAGAGCGACGACTCTGTTTGGTTGGATCTTT
TTTCTGTGTCCGAGGGCAACGGCATCCTGGGCAAGGGGAGGGGGAAATAT
TCAAGTGTTTGTTTCTCTACTGTGGTTGGACATCTATTGGCGGGAGAGGA
GAGATTTAGCGTCGAGTGGCACCAGAGCGACGACTCTGTTTGGTTGGATC
TTTTTTCTGTGTCCGAGGGCAACGGCATCCTGGGCAAGATTGCCACGCCA
CTGGTGAGACCGATCTCCAAGCGGTTCTTCGCGGCGCAGTGCCACCACAT
GCTGAAATTAGTGTCAGGAGAGGAAGACGCATGAATTGCCACGCCACTGG
TGAGACCGATCTCCAAGCGGTTCTTCGCGGCGCAGTGCCACCACATGCTG
AAATTAGTGTCAGGAGAGGAAGACGCATGA
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