prot_H-paniculata_contig28669.7812.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28669.7812.1
Unique Nameprot_H-paniculata_contig28669.7812.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length298
Homology
BLAST of mRNA_H-paniculata_contig28669.7812.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.050e-51
Identity = 108/270 (40.00%), Postives = 160/270 (59.26%), Query Frame = 0
Query:   28 GWVASSPGTRIARVWQDLDRYPVADFKQRYETIVQVKHGLQRDLIAQLFLHCTNLLNHEVSRRRM--PGAETPLSLLRAVKLNDILPALLPSTDGQFSRRKRFLSVKRGDISVVLPWLMACTEAPAARRRSMAGSTSTADRYRKEAAACRHKGGISNAVRALLSDDLEPANQNSFGKFSAKFGKEDAPTLAVAKAATITASQDSLSAGGDVACKPDDKYNPETLIAIVKSKNALSAAGNDGLCFSHLQCILNTSAGKEGFGPVVGSFWRR 295
            GW  +SPG   A     LD   + D   R+ET+ ++K  L  D  A+L  H  NL+N E++ RR   P + TPLSLLRA+KL  +LPALL S DG+ +R++R+ ++KRGDIS  LPWLM   +A ++R R      +  D++++   ACRH GG+ +A RALL++   P N  ++ +  AKF  ED+  +  A A  I  S      G     +P+++++P+ LI ++ S+++ S AGNDG  FSHL+ I NT  G+E F   + S WRR
Sbjct:  326 GWNQNSPGVGPA-----LDEVTMEDLTLRFETVKKIKPWLASDH-ARLQTHALNLVNKELAERRELPPRSGTPLSLLRAIKLWYLLPALLHSFDGRITRKERYKALKRGDISSTLPWLMEYAKAASSRSRGPVQEETQEDKFKRAEQACRHSGGVKDAARALLAEPRSPGNDETWERLKAKFPLEDSAAVEQAVADAIAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRR 589          
BLAST of mRNA_H-paniculata_contig28669.7812.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.310e-47
Identity = 102/269 (37.92%), Postives = 155/269 (57.62%), Query Frame = 0
Query:   29 WVASSPGTRIARVWQDLDRYPVADFKQRYETIVQVKHGLQRDLIAQLFLHCTNLLNHEVSRR--RMPGAETPLSLLRAVKLNDILPALLPSTDGQFSRRKRFLSVKRGDISVVLPWLMACTEAPAARRRSMAGSTSTADRYRKEAAACRHKGGISNAVRALLSDDLEPANQNSFGKFSAKFGKEDAPTLAVAKAATITASQDSLSAGGDVACKPDDKYNPETLIAIVKSKNALSAAGNDGLCFSHLQCILNTSAGKEGFGPVVGSFWRR 295
            W   SPG   A     LD   + D   R++T+ +V+     D  A+L  H  +L+N +++          TPLS +R +KL  +LP +L S DG+ +R+KR+ S+KRGDIS VLPWL+  T+A +AR R  A   +  D++++ A ACRH GG+ +A RALL+D   P N  ++ +  AKF  ED   +  A A  I AS+     G     +P+ +++P+ L+ ++ S+++ S AGNDG  FSHL+ I+NT  G+E F   + S WRR
Sbjct:  157 WNQDSPGIGPA-----LDDVSMDDLSLRFQTVKKVQPRFASDH-ARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRR 419          
BLAST of mRNA_H-paniculata_contig28669.7812.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 2.920e-47
Identity = 97/253 (38.34%), Postives = 149/253 (58.89%), Query Frame = 0
Query:   45 LDRYPVADFKQRYETIVQVKHGLQRDLIAQLFLHCTNLLNHEVSRR--RMPGAETPLSLLRAVKLNDILPALLPSTDGQFSRRKRFLSVKRGDISVVLPWLMACTEAPAARRRSMAGSTSTADRYRKEAAACRHKGGISNAVRALLSDDLEPANQNSFGKFSAKFGKEDAPTLAVAKAATITASQDSLSAGGDVACKPDDKYNPETLIAIVKSKNALSAAGNDGLCFSHLQCILNTSAGKEGFGPVVGSFWRR 295
            LD   + D   R++T+ +V+     D  A L  H  +L+N +++          TPLS +R +KL  +LP +L S DG+ +R+KR+ S+KRGDIS VLPWL+ CT+A +AR R  A   +  D++++ A ACRH GG+ +A RALL+D   P N  ++ +  AKF  ED   +  A A    AS+     G     +P+ +++P+ L+ ++ S+++ S AGNDG  FSHL+ I+NT  G+E F   + S WRR
Sbjct:  189 LDDVSMDDLSLRFQTVKKVQPRFASDH-ACLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIECTKAASARSRGSAREDTPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAKAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRR 440          
BLAST of mRNA_H-paniculata_contig28669.7812.1 vs. uniprot
Match: A0A6H5JGW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW0_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 3.470e-45
Identity = 92/241 (38.17%), Postives = 145/241 (60.17%), Query Frame = 0
Query:   57 YETIVQVKHGLQRDLIAQLFLHCTNLLNHEVSRRRMPGAET--PLSLLRAVKLNDILPALLPSTDGQFSRRKRFLSVKRGDISVVLPWLMACTEAPAARRRSMAGSTSTADRYRKEAAACRHKGGISNAVRALLSDDLEPANQNSFGKFSAKFGKEDAPTLAVAKAATITASQDSLSAGGDVACKPDDKYNPETLIAIVKSKNALSAAGNDGLCFSHLQCILNTSAGKEGFGPVVGSFWRR 295
            ++T+ +V+     D  A+L  H  +L+N +++      + T  PLS +R +K   +LP +L S DG+ +R+KR+ S+KRGDIS VLPWL+  T+A +AR R  A   +  D++++ A ACRH GG+ +A RALL+D   P N  ++ +  AKF  ED   +  A A  I AS+     G     +P+ +++P+ L+ ++ S+++ S AGNDG  FSHL+ I+NT  G+E F   + S WRR
Sbjct:  250 FQTVKKVQPRFASDH-ARLQTHVLHLVNKQLAEGGGASSATGAPLSTIRVIKRWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRR 489          
BLAST of mRNA_H-paniculata_contig28669.7812.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 9.690e-45
Identity = 106/305 (34.75%), Postives = 164/305 (53.77%), Query Frame = 0
Query:    3 VQEDPSSRERVEVFGGVVPAITPQPG-------WVASSPGTRIARVWQDLDRYPVADFKQRYETIVQVKHGLQRDLIAQLFLHCTNLLNHEVSRR--RMPGAETPLSLLRAVKLNDILPALLPSTDGQFSRRKRFLSVKRGDISVVLPWLMACTEAPAARRRSMAGSTSTADRYRKEAAACRHKGGISNAVRALLSDDLEPANQNSFGKFSAKFGKEDAPTLAVAKAATITASQDSLSAGGDVACKPDDKYNPETLIAIVKSKNALSAAGNDGLCFSHLQCILNTSAGKEGFGPVVGSFWRRSME 298
            VQ DP  + R E    ++  +  +P        W   SPG   A     LD   + D   R++T+ +V+     D  A+L  H  +L+N +++          TPLS +R +KL  +LP +L   DG+ +R+ R+ S+KR DIS VLPWL+  T+A +AR R  A      D++++ A ACRH GG+ +A RALL+D   P N  ++ +  AKF  ED   +  A A  I AS+     G     +P+ +++P+ L+ +V  +++ S AGNDG  FSHL+ I+NT  G+E F   + S WRR ++
Sbjct:  126 VQADPGLQLRAE---SLIRGLNDEPHGARSLYIWNQDSPGIGPA-----LDDVSMDDLSLRFQTVKKVQPRFASDH-ARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHFFDGRIARKHRYKSLKREDISSVLPWLIEYTKAASARSRGPAREDRPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIK 421          
BLAST of mRNA_H-paniculata_contig28669.7812.1 vs. uniprot
Match: A0A6H5JJ20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ20_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 2.080e-44
Identity = 84/199 (42.21%), Postives = 124/199 (62.31%), Query Frame = 0
Query:   97 TPLSLLRAVKLNDILPALLPSTDGQFSRRKRFLSVKRGDISVVLPWLMACTEAPAARRRSMAGSTSTADRYRKEAAACRHKGGISNAVRALLSDDLEPANQNSFGKFSAKFGKEDAPTLAVAKAATITASQDSLSAGGDVACKPDDKYNPETLIAIVKSKNALSAAGNDGLCFSHLQCILNTSAGKEGFGPVVGSFWRR 295
            TPLS +R +KL  +LP +L S DG+ +R+KR+ S+KRGDIS VLPWL+  T+A +AR R  A   +  D+++  A ACRH GG+ +A  ALL+D   P N  ++ +  AKF  ED   +  A A  I AS+     G     +P+ +++P+ L+ ++ S+++ S AGNDG  FSHL+ I+NT  G+E F   + S WRR
Sbjct:  195 TPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIEYTKAASARSRGPAPEDTPDDKFKTAAQACRHSGGVKDAAGALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRR 393          
BLAST of mRNA_H-paniculata_contig28669.7812.1 vs. uniprot
Match: A0A6H5KQQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ8_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 2.970e-40
Identity = 93/265 (35.09%), Postives = 144/265 (54.34%), Query Frame = 0
Query:   29 WVASSPGTRIARVWQDLDRYPVADFKQRYETIVQVKHGLQRDLIAQLFLHCTNLLNHEVSRR--RMPGAETPLSLLRAVKLNDILPALLPSTDGQFSRRKRFLSVKRGDISVVLPWLMACTEAPAARRRSMAGSTSTADRYRKEAAACRHKGGISNAVRALLSDDLEPANQNSFGKFSAKFGKEDAPTLAVAKAATITASQDSLSAGGDVACKPDDKYNPETLIAIVKSKNALSAAGNDGLCFSHLQCILNTSAGKEGFGPVVGS 291
            W   SPG   A     LD   +     R++T+ +V+     D  A+L  H  +L+N +++          TPLS +R + L  +LP +L S DG+ +R+KR  S+KRGDIS  LPWL+  T+A +AR R  A   +  D++++ A ACRH GG+ +A RAL +D     N  ++    A+F  ED   +  A A  I AS+     G     +P+ ++ P+ L+ ++ S+++ S AGNDG  FSHL+ I+NT  G+E F   + S
Sbjct:  142 WNQDSPGIGPA-----LDDVRMDALTFRFQTVKKVQPRYASDH-ARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVITLWYLLPGILHSFDGRIARKKRHKSLKRGDISSALPWLIEYTKAASARSRGPAREDTPDDKFKRAAQACRHSGGVKDAARALFADQPSLGNDETWACLKAEFPHEDPVQVEQAVAEAIAASRTEEEGGSAPRWRPETEFAPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSS 400          
BLAST of mRNA_H-paniculata_contig28669.7812.1 vs. uniprot
Match: A0A6H5KJS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS3_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 2.260e-28
Identity = 89/276 (32.25%), Postives = 143/276 (51.81%), Query Frame = 0
Query:   57 YETIVQVKHGLQRDLIAQLFLHCTNLLNHEVSRRRMPGAE----TPLSLLRAVKLNDILPALLPSTDGQFSRRKRFLSVKRGDISVVLPWLMACTEAPAARRRSMAGSTSTADRYRKEAAACRH---------KGGISNAVRALLSDDLEPANQNSFG------------------------KFSAKFGKEDAPTLAVAKAATITASQDSLSAGGDVACKPDDKYNPETLIAIVKSKNALSAAGNDGLCFSHLQCILNTSAGKEGFGPVVGSFWRR 295
            ++T+ +V+     D  A+L  H  +L+N +++     GA     TPL  +R +KL  +LP +L   DG+ +R+KR+ S+KRGDIS VLPWL+  T+A +AR R  A   +  D++++ A ACRH         K G  ++V   L +  + A+  S G                        K +A+    D P  A+A+A  I AS+     G     +P+ +++P+ L+ ++ S+++ S AG+DG  FSHL+ I NT  G+E F   + S WRR
Sbjct:  354 FQTVKKVQPRFASDH-ARLQTHVLHLVNKQLAEGG--GASLATGTPLPTIRVIKLWYLLPGILHFFDGRIARKKRYKSLKRGDISSVLPWLIEYTKAASARSRDPAREDTPDDKFKRAAQACRHXRKKRYKSLKRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAAQACRHSGGVKDAARALLADQPLPAIAEA--IAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGSDGQRFSHLKSIANTKIGREEFSNAMSSLWRR 624          
BLAST of mRNA_H-paniculata_contig28669.7812.1 vs. uniprot
Match: A0A6H5JXI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXI5_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.940e-13
Identity = 44/117 (37.61%), Postives = 72/117 (61.54%), Query Frame = 0
Query:   57 YETIVQVKHGLQRDLIAQLFLHCTNLLNHEVSRR--RMPGAETPLSLLRAVKLNDILPALLPSTDGQFSRRKRFLSVKRGDISVVLPWLMACTEAPAARRRSMAGSTSTADRYRKEA 171
            ++T+ +V+     D  A+L  H  +L+N +++          TPLS +R +KL  +LP +L S DG+ +R+KR+ S+KRGDIS VLPWL+  T+A +AR R  A   +  D++++ A
Sbjct:    3 FQTVKKVQPRFASDR-ARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAA 118          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28669.7812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JH58_9PHAE1.050e-5140.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE1.310e-4737.92Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE2.920e-4738.34Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JGW0_9PHAE3.470e-4538.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKQ2_9PHAE9.690e-4534.75Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JJ20_9PHAE2.080e-4442.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQQ8_9PHAE2.970e-4035.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJS3_9PHAE2.260e-2832.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXI5_9PHAE1.940e-1337.61Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28669contigH-paniculata_contig28669:2104..2997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28669.7812.1mRNA_H-paniculata_contig28669.7812.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28669 2104..2997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28669.7812.1 ID=prot_H-paniculata_contig28669.7812.1|Name=mRNA_H-paniculata_contig28669.7812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
YVVQEDPSSRERVEVFGGVVPAITPQPGWVASSPGTRIARVWQDLDRYPV
ADFKQRYETIVQVKHGLQRDLIAQLFLHCTNLLNHEVSRRRMPGAETPLS
LLRAVKLNDILPALLPSTDGQFSRRKRFLSVKRGDISVVLPWLMACTEAP
AARRRSMAGSTSTADRYRKEAAACRHKGGISNAVRALLSDDLEPANQNSF
GKFSAKFGKEDAPTLAVAKAATITASQDSLSAGGDVACKPDDKYNPETLI
AIVKSKNALSAAGNDGLCFSHLQCILNTSAGKEGFGPVVGSFWRRSME
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