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Homology
BLAST of mRNA_H-paniculata_contig2863.7804.1 vs. uniprot
Match: D7G6E6_ECTSI (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E6_ECTSI) HSP 1 Score: 655 bits (1691), Expect = 1.460e-233 Identity = 337/396 (85.10%), Postives = 372/396 (93.94%), Query Frame = 2
Query: 332 MAMAVSAQLVNLSSKAELKLVEAVAGAMPSGQAEFSKACTALVTNANAPDLIRKILQQRESILKMESIDDIEGCFGMLFSLLYKTENPQAAMPALSLEIATSVLDTVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYSAQAKLVAMLSSFFAGVDDWMKGWDLSVANKRRLYLLISETLGKEGKAVESQKFLMKYLTTFDEASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLKDDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRLLSLCSLATEHEEIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQKSNER 1519
MAMAVSAQLVNLS+KAELKLVEAVA AMPSGQA+FSKACTAL+TNANAPDLIRK+L+QR IL+M DD+EGCFG+LFSLL+KT+NP+AA+PALS+EIAT VL+ VDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRY+ +AKLVAMLSSFFAGVDDW+KGW+LSVA++RRLYLLIS+TLG EGKAVESQKFLMKYL T+D A+ +ELAEVK AAVRGCIGAVK+PIVSFTEQHNLLGMAAV QLK DPKY+ VH+LLHIFSVEKL EYMAFHEK+A TLA+NKIDHDSCVSSMRLLSLCSLATEHEEIPYQVVA+TL+V GD+ VE+WVL+AIQTGLMEAKMDQMQRVVVIRRCTNRVFGP QWKTLQ KLGTWS+NVQ LLSAIQKSNER
Sbjct: 1 MAMAVSAQLVNLSAKAELKLVEAVAKAMPSGQAQFSKACTALITNANAPDLIRKVLEQRNVILEMSKTDDVEGCFGILFSLLFKTDNPKAAVPALSMEIATKVLEKVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYAKEAKLVAMLSSFFAGVDDWIKGWELSVADQRRLYLLISDTLGSEGKAVESQKFLMKYLATYDGATTAELAEVKAAAVRGCIGAVKSPIVSFTEQHNLLGMAAVTQLKADPKYSAVHELLHIFSVEKLGEYMAFHEKNAKTLADNKIDHDSCVSSMRLLSLCSLATEHEEIPYQVVADTLQVSGDDEVEDWVLQAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPAQWKTLQMKLGTWSANVQTLLSAIQKSNER 396
BLAST of mRNA_H-paniculata_contig2863.7804.1 vs. uniprot
Match: A0A835Z3J7_9STRA (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J7_9STRA) HSP 1 Score: 394 bits (1012), Expect = 2.680e-130 Identity = 212/398 (53.27%), Postives = 287/398 (72.11%), Query Frame = 2
Query: 338 MAVSAQLVNLSSKAELKLVEAVAGAM--PSGQAEFSKACTALVTNANAPDLIRKILQQRESILKMESIDDIEGCFGMLFSLLYKTENPQAAMPALSLEIATSVLDTVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYSAQAKLVAMLSSFFAGVDDWMKGWDLSVANKRRLYLLISETLGKEGKAVESQKFLMKYLTTFD---EASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLKDDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRLLSLCSLATEHEEIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQKSNE 1516
M VSAQLVNL +A +KLV AVA A+ P+ Q F C+ L+ ANA +LIRK+L R+ +L + + IEGCF +LF LL++ +P MP L E+ ++LD+ +D+A LRL+L T+LYNMLP +T+ Q EVLL +I+Y+A L+AML+SFFA ++ + W LS+ ++RRL+LL+++ L K A SQ FLMKYL TFD E S + EV+ AA RG +GAVKAPIVSF E HNLLGM+AV +L++DP+YA V++LL IF EKLE Y+AF + + L ++ I HD CV +MRLLSLCSL +E +E+PY V++ETL+V+ ++ VEEWVL+A Q GLMEA+MDQ+++VV+I RCT RVFG EQW +LQ KLG W +NV LL IQ+SNE
Sbjct: 1 MDVSAQLVNLGPEAPVKLVGAVAAALKDPAEQNAFRTECSKLINEANAAELIRKLLGHRQVMLSFDKEETIEGCFAVLFHLLHRLPDPAKNMPVLVPEVTAALLDS-EDKAGLRLRLATSLYNMLPAKTSVQFEVLLAIIKYAASTGLLAMLNSFFASMESMLAAWQLSLKDQRRLFLLVADVLSKASDAAGSQVFLMKYLVTFDNDAEGSKTSAKEVRAAAARGAVGAVKAPIVSFMEHHNLLGMSAVQELRNDPEYAQVYELLRIFGEEKLETYLAFAKANQALLEKHGISHDECVGNMRLLSLCSLGSEAQEVPYSVISETLQVDPED-VEEWVLQATQAGLMEARMDQLEKVVLISRCTCRVFGKEQWLSLQAKLGQWKANVSGLLQTIQRSNE 396
BLAST of mRNA_H-paniculata_contig2863.7804.1 vs. uniprot
Match: A0A7S2CTT4_9STRA (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTT4_9STRA) HSP 1 Score: 259 bits (662), Expect = 2.570e-78 Identity = 148/344 (43.02%), Postives = 226/344 (65.70%), Query Frame = 2
Query: 500 QQRESILKMESI--DDIEGCFGMLFSLLYKTENPQAAMPALSLEIATSVLDTVDDRAPLRLKLVTNLYNML---PVRTAGQL--EVLLLVIRYSAQAKLVAMLSSFFAGVDDWMKGWDLSVANKRRLYLLISETLGKEGKAVESQKFLMKYLTTFDEASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLKDDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRLLSLCSLATEHEEIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQKS 1510
Q +++++ E + D EGCF +LF L + ++ +P + L TS L + +A LRLK++ NLYN L GQ+ +VLL +I+Y+ + + AML +F +D+ M W+LS+++KR L++ +S+ L E ++ +FL++YL TFD+ S + + AA +G IGA++ PI+ F E+HNLLGM A+ QL++D +Y +++LL IFSV KL EY+ F+E T+ ++H+ C+++MRLLSLCSLATEHEEIPY +AETL+V +E VE WV+ LM+AKMDQ+Q+VV+I RCT+RVF QWK L ++L TW NV+ +L IQ++
Sbjct: 41 QHTDALIESEKVADSDAEGCFQILFFELQEEKDTAVMLPLVGL--ITSALTGSESKAKLRLKILANLYNALCSDDKVPEGQIRVDVLLAIIKYAGKTQQSAMLHGYFDLLDELMVKWNLSLSDKRTLFVEVSKALEAEELNDKAHQFLIRYLATFDDTS--DAVDTSKAA-QGAIGAIRKPILCFMERHNLLGMTAMQQLENDAEYGKLYELLRIFSVGKLREYLNFYEAEKGTMERYGLEHEECIANMRLLSLCSLATEHEEIPYAAIAETLEVPLEE-VEYWVVATTTAKLMDAKMDQLQQVVMISRCTHRVFEHSQWKQLAERLTTWKINVRNILETIQRT 378
BLAST of mRNA_H-paniculata_contig2863.7804.1 vs. uniprot
Match: D8SV81_SELML (Eukaryotic translation initiation factor 3 subunit M n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SV81_SELML) HSP 1 Score: 215 bits (547), Expect = 4.770e-61 Identity = 135/368 (36.68%), Postives = 209/368 (56.79%), Query Frame = 2
Query: 425 QAEFSKACTA---LVTNANAPDLIRKILQQRESILKMESIDDIEGCFGMLFSLLYKTENPQAAMPALSLEIATSVLDTVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYSAQAKLVAMLSSFFAGVDDWMKGWDLSVANKRRLYLLISETLGKEGK--AVESQKFLMKYLTTFDEASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLKDDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRLLSLCSLATE-HEEIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQKS 1510
+AE S+ C L +L+ +L E +L D E F ++ +L+ K +P A+ A++ +IA+ V V D+ LRL+++ NLYN+L G+ + ++ K+ +++ F +D ++K W+++ A KR+L+L I+ L K+GK A +S FL+KYL TF L E K AVR I VKAP + Q +LL MAAV QL+ D KYA V++LL IF +L+ Y+ F + + H+ C++ MRL+SL LA++ EIPY + + LKV GD+ VE W+++ I T +++AKMDQM + VVI RCT RVFGP QWK L+ KL W N+ + +++ +
Sbjct: 34 EAEISRICEEAENLAVENRWSELVSLLLTSSEMVLSNTPEKDSEAVFSVITNLVSKARSPDEAL-AMADQIASKVTPNVTDKPALRLRILFNLYNVLD-NPYGRFLTFKRAVDFAVNGKVTELVTPSFKRMDAFLKEWNIAKAEKRKLFLAITNIL-KDGKSSAKDSFSFLLKYLATFSGEDNQTLGEAKEEAVRAIIEFVKAPDMF---QCDLLDMAAVCQLEKDSKYAPVYRLLEIFLTSRLDAYLEFQASNPNLFKNYGLVHEECITKMRLMSLAGLASKASREIPYVTIKDALKV-GDDEVEYWIVKGIATKMLDAKMDQMHQHVVISRCTERVFGPTQWKELRAKLAVWKENIWNVTRSVENA 394
BLAST of mRNA_H-paniculata_contig2863.7804.1 vs. uniprot
Match: A0A7S2MXL1_9STRA (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MXL1_9STRA) HSP 1 Score: 215 bits (547), Expect = 6.340e-61 Identity = 144/411 (35.04%), Postives = 227/411 (55.23%), Query Frame = 2
Query: 347 SAQLVNLSSKAELKLVEAVAGAMPSGQAEFSKACTALVTNANAPDLIRKILQQR---ESILKMESIDDIEGCFGMLFSLLYKTENPQAAMPALSLEIATSVLDTVDDRAPL----RLKLVTNLYNMLPVRTAGQLEVLLL--VIRYSAQAKLVAMLSSFFAG-------VDDWMKGWDLSVANKRRLYLLISETLGK----EGKAVESQKFLMKYLTTF-DEASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLKDDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRLLSLCSLATEHEEIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQKSNE 1516
S+ LVN++ AEL+LV ++G S F C A + NA+AP LIR IL E++ ++ ++ F +L +LL + + + PA +AT + DTV + R+ ++ LYN+ R+ G ++LLL +++ SA + ++ + G + M GWD+ +R L+ + + E + Q++L+ + ++ DE+ E E AA +GA++ P+ FTEQ +L M A+ L +P +H LL IF KL++Y AF ++ TL E + +D CV +MRLLSLCSLA EHEEIPY +A TL V+ DE VE WV+ A+ +GL+ AKMDQ+Q+VV++ RC R FG +QWK LQ +L W NV+ +L +++S +
Sbjct: 18 SSTLVNVAEHAELRLVRLLSG---SAAPSFESTCEACIANADAPGLIRTILSDSGAMEALFALDPAEEAVSAFSLLAALLDRVGSDR---PAEEAGLATELADTVGNNESYDVTKRIAMLCALYNL---RSDGAEKMLLLGRIVQLSASSNPKSLCAGQPLGDLLEADNITSMMDGWDVPKQQRRFLFRKVVDGAANVEDDETLVAKRQRYLLLLVESYADESEIDE--EALTAAKEASVGAIQDPVTLFTEQRGMLVMPAIVALGKNPATKPLHSLLTIFQEGKLQDYDAFVTTNSPTLTEYGLSNDDCVRNMRLLSLCSLAAEHEEIPYSAIASTLHVK-DEEVESWVIAAVSSGLLSAKMDQLQQVVMVERCAVRKFGMDQWKVLQVRLNDWKKNVKGVLDGLKQSQQ 416
BLAST of mRNA_H-paniculata_contig2863.7804.1 vs. uniprot
Match: A0A1U8A2I7_NELNU (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8A2I7_NELNU) HSP 1 Score: 213 bits (541), Expect = 3.610e-60 Identity = 130/345 (37.68%), Postives = 201/345 (58.26%), Query Frame = 2
Query: 479 DLIRKILQQRESILKMESIDDIEGCFGMLFSLLYKTENPQAAMPALSLEIATSVLDTVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYSAQAKLVAMLSSFFAGVDDWMKGWDLSVANKRRLYLLISETLGKEGK--AVESQKFLMKYLTTFDEASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLKDDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRLLSLCSLATEHE-EIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQ 1504
DL +L + I S D+E F ++ +L+ KTE+P A+ L I+ V +D+ LRLK++ LYN+L + V ++ + + K+ + F +D+++K W++ ++R+L+L IS L KE K A +S FL KYL TF A L+E K AVR + VKAP + Q +LL M A+ QL+ D KYA V+QLL IF ++L+ Y+ FH ++ L + H+ C++ MRL+SL L + EIPY ++ ETL+V DE +E W+++AI L++ KMDQM +VV++ RCT RVFG QW++L+ KL TW N+ +++ IQ
Sbjct: 55 DLASLMLTSADLIFSRVSEKDLECSFAIICNLVTKTESPDEALEMAKL-ISAKVSQQANDKPALRLKILFTLYNLLE-NPYSRFYVYMVALTLAVNGKVTEHIIPSFKKIDNFLKEWNIGTLDQRQLFLTISNIL-KENKSSAKDSFHFLTKYLATFSSEDAYTLSEAKEEAVRAIVEFVKAPDMF---QCDLLDMPAIGQLEKDGKYALVYQLLKIFLTQRLDAYLDFHAANSTLLKSYGLVHEDCITKMRLMSLADLGSNDSGEIPYALIKETLRVTDDE-IELWIVKAITAKLLDCKMDQMNQVVIVSRCTERVFGLHQWQSLRSKLATWRGNIANVINTIQ 392
BLAST of mRNA_H-paniculata_contig2863.7804.1 vs. uniprot
Match: UPI000B8CC979 (eukaryotic translation initiation factor 3 subunit M-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CC979) HSP 1 Score: 212 bits (540), Expect = 5.060e-60 Identity = 134/345 (38.84%), Postives = 200/345 (57.97%), Query Frame = 2
Query: 479 DLIRKILQQRESILKMESIDDIEGCFGMLFSLLYKTENPQAAMPALSLEIATSVLDTVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYSAQAKLVAMLSSFFAGVDDWMKGWDLSVANKRRLYLLISETLGKEGK--AVESQKFLMKYLTTFDEASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLKDDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRLLSLCSLATEHE-EIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQ 1504
DL IL + I S D+E F ++ +L+ K E+P ++ L I+T + DDR LRLK++ NLYN+L + V + + + K+ + F ++ ++K W++ V ++R L++ I+ L KE K A ES KFL KYL TF A ++E K AVR I VKAP + Q +LL M AV QL+ D KYA V+QLL IF ++L+ Y+ F ++ L + H+ C++ MRL+SL LA++ EIPY ++ +TL++ DE VE WV++AI L++ KMDQM +VVV+ RCT R FG +QW L+ KL TW N+ ++S IQ
Sbjct: 55 DLTSLILTSADLIFSKVSEKDLECIFTVICNLVIKPESPDESLEISKL-ISTKITQQPDDRPALRLKILFNLYNLLE-NPYSRFHVYMKALNLAVSGKVTEYIVPSFKMIESFLKEWNIGVQDQRELFISIANVL-KENKSSARESFKFLTKYLATFSGEDAYTMSEAKEEAVRTIIEFVKAPEMF---QCDLLDMPAVGQLEKDAKYALVYQLLKIFLPQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLISLVDLASDESGEIPYALIRDTLRINDDE-VELWVVKAITAKLIDCKMDQMNQVVVVSRCTERAFGQKQWLALRGKLATWRGNIANVISTIQ 392
BLAST of mRNA_H-paniculata_contig2863.7804.1 vs. uniprot
Match: A0A7N2RF70_QUELO (Eukaryotic translation initiation factor 3 subunit M n=7 Tax=Fagaceae TaxID=3503 RepID=A0A7N2RF70_QUELO) HSP 1 Score: 212 bits (539), Expect = 7.090e-60 Identity = 130/345 (37.68%), Postives = 201/345 (58.26%), Query Frame = 2
Query: 479 DLIRKILQQRESILKMESIDDIEGCFGMLFSLLYKTENPQAAMPALSLEIATSVLDTVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYSAQAKLVAMLSSFFAGVDDWMKGWDLSVANKRRLYLLISETLGKEGKAV--ESQKFLMKYLTTFDEASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLKDDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRLLSLCSLATEHE-EIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQ 1504
+L +L + I S D+E F ++ +L+ K+E+P + L I+ + +D+ LRLK+V NLYN+L + V + + + K + F +D ++K W + ++++R L+L IS L KE K+ ES KFL KYL TF A ++E K AVR + VKAP + Q +LL M AV QL+ D KYA V+QLL IF ++L+ Y+ F ++ +L + H+ C++ MRL+SL LA++ +IPY ++ +TL++ DE VE WV++AI L++ KMDQM +VV++ RCT RVFG QW+TL+ KL TW N+ ++S IQ
Sbjct: 55 ELASLMLTSADLIFSKVSDKDLECIFTVICNLVTKSESPDEELEMAKL-ISAKITHQPNDKPALRLKIVFNLYNLLG-NPYSRFHVYMNALNLALNGKATEHIVPSFRKIDSFLKEWGIGISDQRDLFLTISNVL-KENKSSGKESFKFLTKYLATFSGEDAHIMSEAKEEAVRTIVEFVKAPDMF---QCDLLDMPAVGQLEKDAKYASVYQLLKIFLTQRLDAYLEFQAANSTSLKSYGLVHEDCITKMRLMSLVDLASDESGQIPYALIRDTLRINDDE-VELWVVKAISAKLIDCKMDQMNQVVIVSRCTERVFGQNQWQTLKSKLSTWRGNIASVISTIQ 392
BLAST of mRNA_H-paniculata_contig2863.7804.1 vs. uniprot
Match: A0A5J5AHA4_9ASTE (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5AHA4_9ASTE) HSP 1 Score: 211 bits (537), Expect = 1.390e-59 Identity = 131/345 (37.97%), Postives = 200/345 (57.97%), Query Frame = 2
Query: 479 DLIRKILQQRESILKMESIDDIEGCFGMLFSLLYKTENPQAAMPALSLEIATSVLDTVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYSAQAKLVAMLSSFFAGVDDWMKGWDLSVANKRRLYLLISETLGKEGKAV--ESQKFLMKYLTTFDEASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLKDDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRLLSLCSLAT-EHEEIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQ 1504
DL +L + I S DIE F ++ +L+ K E+P ++ L IAT + + +D+ LRLK++ NLYN+L Q V + + + K+ + F +D++++ W + + ++R L+L +S L KE K++ +S KFL KYL TF AS + E K AVR I VK P + Q +LL M AVAQL+ D KYA V+QLL+IF ++L+ Y FH ++ L + H+ C+ MRL+SL L + E +IPY ++ +TL++ DE VE WV++AI LM+ KMDQM ++V++ RCT RVFG QW+ L+ KL W N+ ++ IQ
Sbjct: 55 DLASLMLTTADLIFSKVSEKDIECIFTVICNLVTKPESPDESLEMAKL-IATKITNQPNDKPALRLKIMFNLYNLLE-NPYSQFFVYMKALNLAVNGKVAENIIPSFKKMDNFLREWHIGIKDQRELFLAVSNVL-KENKSLAKDSFKFLTKYLATFSGEDASIIGEAKEEAVRTIIEFVKVPDIF---QCDLLDMPAVAQLEKDAKYALVYQLLNIFLTQRLDAYFDFHAANSTLLKSYGLVHEDCIVKMRLMSLVDLGSAESGQIPYALIKDTLQINDDE-VELWVVKAITAKLMDCKMDQMNQIVIVSRCTERVFGQHQWQALRAKLAIWRGNIANVIGTIQ 392
BLAST of mRNA_H-paniculata_contig2863.7804.1 vs. uniprot
Match: A0A059AR93_EUCGR (Eukaryotic translation initiation factor 3 subunit M n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A059AR93_EUCGR) HSP 1 Score: 211 bits (536), Expect = 1.950e-59 Identity = 126/344 (36.63%), Postives = 201/344 (58.43%), Query Frame = 2
Query: 479 DLIRKILQQRESILKMESIDDIEGCFGMLFSLLYKTENPQAAMPALSLEIATSVLDTVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYSAQAKLVAMLSSFFAGVDDWMKGWDLSVANKRRLYLLISETLGK-EGKAVESQKFLMKYLTTFDEASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLKDDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRLLSLCSL-ATEHEEIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQ 1504
DL+ +L + I S D+E F ++ + + K+E+P + L I+ ++ +DR LRLK++ NLYN+L + G+ +V + + + K+ + F +D ++K W++ + ++R L+L IS L + + A +S KFL KYL TF A + E K A R + VKAP + Q +LL M AV QL+ D KYA V+QLL IF ++L+ Y+ F ++ +L + H+ C++ MRL+SL L ++E +IPY ++ +TL++ D+ VE WV++AI L++ KMDQ+ VVV+ RCT RVFG +QW L+ KL TW NV ++S IQ
Sbjct: 55 DLVSLMLTSADLIFSKVSEKDLECVFTVICNAVTKSEDPDQILEMAKL-ISAKIVQQPNDRPALRLKILFNLYNLLNI-PYGRFQVYMKSLNLAINGKVAEHIVPSFKKIDSFLKEWNIGINDQRELFLTISNVLRESKSSAKDSFKFLAKYLATFSGEDAHAMIEAKEEAARAVVEFVKAPDMF---QCDLLEMPAVGQLEGDAKYALVYQLLMIFMTQRLDAYLEFQAANSASLKSYGLVHEDCITKMRLMSLVDLGSSESGQIPYALIRDTLQINDDD-VESWVVKAISAKLLDCKMDQLNEVVVVSRCTERVFGEQQWVVLRGKLATWKENVANVISTIQ 392
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 658.3 |
| Seed ortholog evalue | 2.3e-186 |
| Seed eggNOG ortholog | 2880.D7G6E6 |
| Preferred name | EIF3M |
| KEGG ko | ko:K15030 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0001732,GO:0002020,GO:0002181,GO:0002183,GO:0002790,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0005852,GO:0005856,GO:0006412,GO:0006413,GO:0006508,GO:0006518,GO:0006807,GO:0006810,GO:0006996,GO:0007030,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009306,GO:0009653,GO:0009893,GO:0009987,GO:0010033,GO:0010256,GO:0010467,GO:0010604,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016282,GO:0016485,GO:0019222,GO:0019538,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030162,GO:0031323,GO:0031325,GO:0031369,GO:0031638,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032940,GO:0032991,GO:0033036,GO:0033993,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042886,GO:0042981,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043280,GO:0043281,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0045862,GO:0046677,GO:0046903,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048522,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051604,GO:0051704,GO:0051716,GO:0052547,GO:0052548,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0070864,GO:0070865,GO:0070887,GO:0070993,GO:0071236,GO:0071310,GO:0071396,GO:0071541,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0080090,GO:0089720,GO:0097202,GO:0097305,GO:0097306,GO:0097307,GO:0097308,GO:1900117,GO:1900119,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701,GO:1990904,GO:2000116,GO:2001056,GO:2001270,GO:2001272 |
| EggNOG free text desc. | translation initiation factor activity |
| EggNOG OGs | KOG2753@1,KOG2753@2759 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03012 |
| Exons | 11 |
| Model size | 1522 |
| Cds size | 1191 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2863.7804.1 >prot_H-paniculata_contig2863.7804.1 ID=prot_H-paniculata_contig2863.7804.1|Name=mRNA_H-paniculata_contig2863.7804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=397bp
MAMAVSAQLVNLSSKAELKLVEAVAGAMPSGQAEFSKACTALVTNANAPD LIRKILQQRESILKMESIDDIEGCFGMLFSLLYKTENPQAAMPALSLEIA TSVLDTVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYSAQAKLVA MLSSFFAGVDDWMKGWDLSVANKRRLYLLISETLGKEGKAVESQKFLMKY LTTFDEASASELAEVKPAAVRGCIGAVKAPIVSFTEQHNLLGMAAVAQLK DDPKYAGVHQLLHIFSVEKLEEYMAFHEKHAVTLAENKIDHDSCVSSMRL LSLCSLATEHEEIPYQVVAETLKVEGDEAVEEWVLRAIQTGLMEAKMDQM QRVVVIRRCTNRVFGPEQWKTLQKKLGTWSSNVQMLLSAIQKSNER* back to topmRNA from alignment at H-paniculata_contig2863:577..14636- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2863.7804.1 ID=mRNA_H-paniculata_contig2863.7804.1|Name=mRNA_H-paniculata_contig2863.7804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14060bp|location=Sequence derived from alignment at H-paniculata_contig2863:577..14636- (Halopteris paniculata Hal_grac_a_UBK monoicous) TGTGGCTGCAGTTCCACCCTCCCGACCTCCCTTCATCTCTCTCTGTGCGG
AAGACTTGCTAACTTCGATTCGCTGTGATTCACCTACTGCGTTCGCGGTT
GTTCGCTTGATCTCGCTGTTGGCGAAGGTGAGGGAAATGGAAACAATGAT
GTTCTCTGCGGTTGGTGCTGGGTCAATCTATGTGTTGTATTTTGTCGATT
ATTTAACACGGCATGCCAACTGTACACCTGGTACGGCAGGTGTGAAAAGC
ATGTCACCGTAAGAGCTTCAGCTGTTGGCAAATTTTCTGTTCCCGTGAAT
ACTGTGCTTTATGCGGAGGATGCAAAATCGTCACCGACTCTCGACAGAGT
ATTGATCTTTGTCAATACCTGTTTGCTTTGCTTCGTTGACAGTATACAGA
TGGACAGTTACAGACCATGTCACTCAACTACAGATGGAAAGTACAGAGAA
TAGATATATGCAGTCAAGAAGACCTGGATCATCAGACACTCCTGCACCGA
GCCATGAATTTTAAAAGACAATGGCCCAACCACATGATGCGATCTTGGTG
CAGACGAACACAACATCTGCTTGTGTGCGGCTTTCTTACCTTCACCGCCG
CAATCGATGCATATTTCATTGCATCCTACTGGCTATTCTGTCTGTCTTGA
GCTCTTGAATGTACGTTCACTTGCGTTGTTTTCGCACAAAACAGCCGCAA
AACTAGTGAACAATCCATACAAGTATGAAGTGTATCTCCTGAAGTCAGGT
TGCCTTAATTTGCTAAGTTTCTGGCGGTGGTGTTGAACGAGCTCTGCCTG
GCTCTCGTGGGTTCACTACCCAGCGTAGATACTATTGCGAAACGTACGCC
ATGTACCCTGAACACGGTGACATCTCCAAGCGTCAATATGATCGTTTCCA
ATTACATTCAAGAAGTACTCTGTATGTAGTACGGGCAGTCAGTCTTTCCC
GTCGTCTGTCTGCACTGCACTGCGCTATACTGTACTGTACTGCATTGTAG
TGTGCTGACACTGTTGTAACCTCCGCACTTTGCTCCATATACACACGCCG
CAGGCAGCTGTTTTTGCTCGGAAACGAAAGGGACTCGAGAGAAGAGCTCA
CTTGCTTCACGGACGGAAATTCAAAGCGGCGGAAGCGCAGAAGCATTTCA
ACTGCAACGGAGTGTGGAGCGGGAGCCTAGAGTACTGTCTATCGTTGCTC
GAGTAAATAGCAGGAAAGCGGACTGCTACTGATCTGTATTGTACTGAGGT
ATAAAACATGGCGATGGCGGTATCAGCACAGCTGGTGAACTTGTCTTCAA
AGGCGGAGCTGAAGCTTGTGGAAGCGGTGGCTGGGGCGATGCCCTCTGGG
CAGGTGAGTCACGAACACAAAAAAAACTCGTGAAAAAAGAATGGCACCCA
GTAATGGAGTATGACAATGACCACTCCAAACACGCTTGTGCAGCAGTCCA
TCATTTTACCTTTTAATAATTAATTGGTCCACCCGCGTGGAACGCCTGCT
CTCTGTGCTCTCGCACAAAATTCTTTTTTCGAAAATTACTCGAGTACCGT
CTTGATAATCTGCTGTAAAACTGAAATGACGAACGACAACGAGGACCGTC
ACTTCGCCGTATCGTCATAAGTACTAAAGTAAGTGCACCCGCAGCTGCGG
CCGTGGCAGTTAAATTCTGGTGTTTTTTCCTCGCACACCACTCTGCCGTA
TTGCTTAATAGACGATACATCGAGCCCTTTCGTGGCTGATTAGTCCATTG
ACAATCGTCAACCATGCGCCCCGTGTCCTGTAACAATGTTTGATGGACTT
TTAACCCTATCTCGCGTGGACTGGTTTGTTGTGTTCCAAGTGTCCGTCGA
GACTCACACGTTTTCGCTCTAACTTCGGGGAGTCCAAAGTTCATTTAATT
TTAAGTGGTAAAATTGCCCGTGGAGCGATGGAGCGAAAGGGAGAAGAATA
CTCTCGATCAGAGTGAACCATCGTCGGTTGAAACTTCGACCAACAAGCGA
GTGGGACTGATATCCCATCACATCCCATCTCCACCCCGCGACAGTTCAAG
GCAAGAAGTATACATACCAGGAGGCGTTCAATAATGAATGTTTACACTTG
CAGCTCTGAACCAATAGGTCCCGATCAATTGACAGCCTTGTTCAATGCAT
TGCCGGGAAGAAAATAGACATTTTTTTGTACTGTGTGACAGATGGTTTTG
ACTTGAATTACGAGGAGAAAAATATAAGGGGGGATTTTACAGCTGATTGG
TATGTACCTACCGCTTAGTATATTTATCTTACACACTTTCAGAGTCTCTC
ATCCAATCGCGTGCAGGAAGGCTGAGTTACTGTCATGTCACGATGACGGA
ATGCAGTGCCTCCATGTGACTAGGTTTCATTGGGGTACTGAATGACAGGG
AGCGTCGCTGCGCTCTGGGACAATCTTCTCCTAGGTTCCGCCTTGCTTTT
CGGCGTGGGCTAACTAGCACTGCTAGCAGAGACCGGACTGACACAGGGTA
GTTACGATATACTGAAGTAGTATGATCATTATGGGCGTTGCACAAATCGG
TGCGCATCGATCGGTAGGCAGCGATCGCAGTCGACGTTTTCTCCAAGCTG
TGCTGGGCGAGATATCGACGTTGGCAACCCTTGGATTGACCCACGCGCGC
ACAGTGCTCGTCATGGGCAACACTGCTAACAGTAGAGACCGGGCTGTACA
CCTTGGTCGCGATGTGTACTGTAGTCTGTAGTAGTTCCGTCGACTGTGTC
AGTGCTGCTGGGAGCATGGTGCATGGTGTTCCCCAAGATTCAGAGGCACG
TGATTAGTTAATGAGCATCGATGTGCACATAAATAACGGTGTTTGATTGG
CTCGTGTGCATCAGGATCTTTCCACCTACATGAAACTTTCGCTAAAATAT
ATCCACTGACTGACTGACTGCCGTGAGCGTATTTTGTTATTCGGTGTCAG
GTAAGGTAAGCATGTGGTGGACAACAGGATTCGAATGTATCTGGAGCTAC
GTGTAGAAGTAAATAGTGAACAGTGAAGCTCGCTTCCATACCTCTCGAGG
AATCGACCGTGTCTTGTGTGTTGCATTGCGACTGCATCCCTGTTGATGGC
GCGCGTGTGTGTGTGATTGTTGCTTTTGTAGCTGGATGATTCAAGTGATA
TTTCCCCTACCAGTACAACAGATAAATCCCAAAAACGTTGCGGTCATTGC
GCTTGACTAGGATACTCAATAAGTAGTTCGACAAGGTATGATCCTTTCAG
GGTAACCTTCCTGGTCATGATTCATAAACTGTAGAACGATATCATAGCTC
CTGCAGTAAAGATCCTGAATGAGTATATGTTCTCTCAATTGTGTACGATT
GTTAAGTTCGCGTACACACCCTGACTCATCGCGGTCGCTCGCAAGGTGTG
ACAATATAAAATCAATCCCGCCAGCTTGTAATACACGAAGCTCCTTTCAT
TCTCACATCTCCTGTTACTCTTTCGCCAGTTACCGGTCAACCATTAACTC
GAGCTCAGTCAGCATATACATCAACCATGGCATATGTTCAATGGGCCCGA
GAATACGCCCGCGAAATTCCGCGGGTGGGAATCGTCTTTGAGGGTCAAAA
CGTCAGGACTGGTGCAGGATAGACCCATGACAGTAAATCGATGCTCGTTT
CGATGTTTTTTCTCTTCTCTTGTACAACTATTTGCCGGTTCACCACCACC
TCTGACTCCCTCCACCTCCCTTCCTCTCTTCGGGAGCGGAAGCCCTTTTT
TGGCGACGTTCAGTGCTCCCGCCTTGGTCATAGACCAATCGAGTAACTAT
GCGATGCGATGCTGCAAAATAGACCTAGATGGGACATACAAGTTAGGCGT
CGTTTGGGTGTGAGGGGTCGTGAGGGGGCTTGGAGCGACGGGGCCATGTG
CCGCTGCGAGACGCGAGACATTCCTCCGCTCGCGAATTCGGGGCGTCGGT
CCGTTTAAAACGAAATTATATAAGTGTCTGTATTTCGTCGAGGGGCTTCG
TAACTTTCAGTTTTAGAACAAATACCACCCCGCCCCCCCGTCCCCCCTCC
CCTGGCCTGTTTTTGGGTAAAATACTTGTTCTTCATAGGTTTGCACTCCC
CGGAAAAATACGAATACTTGCAAATACTTTTTTTTTTTAAGCTGAAGTTA
TTCGCCTGAGTTTCAAAATGGACGGACACGTGAAATGAAGTGCCCGCCCC
TGTTCATTTGATTTACGAGTATTATTAGCTATCGTAGATGGTCCGGGGCA
CACGTGCACAACACACCAACTCATTCTGAAACTCAGGCGAATACTTTGAG
GTTTTGTGAAAAAACCGTGTGCAAGCACTCTTATATTTGTCCGGGGGATA
TATTCTTGACAGTACTACGGTATGGAATTTTATCCCGCGCAATTTACGAG
TTGCGCAGATTACGGTGGTACATCTCGTAGGGGGCCTTCTAGCGAGCGTT
GATGTCTGAAATTGGGGATATTGGCAAAAATCCTTTCCCATCCCTCCCTC
CCCTCAGCTTTTTTGAAATAGTGTTGGGCCCATTGTTCCTGATCGATCTT
AGGTTCGTTATGATTTGCATGTCTGTTGCACGACATCTTGAAATCTGGGA
ATCTGGTGCCAGCACTCAAAATGAGCTCTCTCTTACCTGTTTTTTTTGGG
TTTTTTTCGAAGCGATCGATTTTCCGATTGTGCTTTCAGCTTTCGTCGGT
TAGCCTGTATCTACAACTTTCCAGAGGCCATCAAACATCTACTCAGATGG
AGTGAAGGATGGGGGAAAAAAAAAAAACGCGATGTGTAGACGGGAGACGG
TGCGAGGTGTCAGTGGCGTAATGATTGATGCGCTTGGACAAAGAAAATTC
AGAACATTTGTAAAAAAAAAAAGAAGAACGAGGAGTTTGAAAAATATCTC
TTGCTTTTCTTCTTCAAATCAATGCTGACTATGACAGTGTGCGCTGTCCT
TGTATTACACTACTGTTGGATTTACCCCTTATTCGTGTATATACGTGCTT
GGCGTATATATATATATATATATTCTACTGCCGTATAATGTTTTTCATTT
TTTTTCACGGGAGCAAAACTATATATTTTTGGTTTACAGGCGGAGTTTTC
GAAGGCATGTACGGCGCTCGTCACGAATGCTAACGCGCCTGACCTGATAA
GGAAGATTCTGCAGCAACGGGAGTCTATCCTGAAAATGGAGAGCATAGAC
GGTAAGGGTGGGCGTCTTTTGTGTACAGTACAAATACGGTTATTCTCCAT
ATTCATTCTTCTTTTGCGTTTTCTTTTTTTTTTCTTTTTTTTTCAGTTAT
TCACCTGGTACTAACACGCATATTCCGCGTTCGAGTAACAGACAGGCTGT
ACTGTAGAGAATGACGGGGTGCTACGAGGACGAACGCAGGCGTAGGGAGC
TAGCCTTATCTAGAGAAGATGCTCCGCGACACATGGTCTTACGTGTGTAT
GTGTTGTTAGCTTTTGGTGTGTTTCACCATAGGTTTACACTTTTTTTAAG
TTTGAAGGTTCTGCGGTAGGTGTATGGTACAGTACGGAATCGATGTGACC
ACTGCCGCAGTGCCTATATGCACCCGAATATTATTAGTTCCCTCTTTTTT
TTTCTTTCTACCCCAGACACAAAAAAAATAATCTGTATCAGCAGCATCGA
GAGGGAAGAAGCTTAAGCCCACAGCACTTTTTACCGTGTTCCGATTCCAG
ACCCATGCAGAACGCATGGAGTATAATCTTGTCCGTCAACCCTTCGGTTA
AGCTCACACCTAGAGTATATTGTGGGATAGCCGTCCAGGACCGCCTTCGG
TCTCTGGGTTGTACGTGACTTGGCCGTTTTAGCATACGGTAATAGACTGC
ACCCGAAGGTGCAGAATCCTCACACGTCAAGACCCTTAATCTCAACTCCT
GTCCGGTCATCGGCAAAGGTTACCTTCTAGCCGTGCCCGACCCGAAGGCT
TAGACTCGTCAGTTCCCTCTCTTGATCTCATTTGTTGTTAATGATTGTCT
GATGGCTGCAGAATACGCAGCTCTTAGAAATGAGCTACTCTACGATAAAG
TCAGCTTGGGTAATCTTTTACCTTGTGTACGTCGTTTTTTATCATGTTAT
TGTCGTTGTCCAAAGTTTAAAGCTTGCTGACGAATAGCTGTGGGTACAGG
GTATGTGACAAACGTAGCGTGGAGTATATTTTGTGTGATATTTTCGTAGC
CAACGGATTTGCCACTAAATGTCAAGAATTTACCAAAGATCGTCACAGTG
AAGTACTAGTAAATACCCAGTGTACAGCGCTCTATATAGGTTGGATTTGG
ATGGAAGATGGTAAGGAGGCGAGGTAGAGGGGGAAGGAGGGAGTACTTAA
TGAAATATACCCAGTATTTTTGGACCCGTATTTCATCGAGTCCATTATAA
TACTGGATCAAGTATAGTAATCGAGGAGTATACTGGTACTGATGTACTAC
GACGGCCTTTCAGTGTGAAGACATGCGACCCCCAGCGGGCTCATTCAGTC
TGTCCTCTCCTCCTTTTGCAGGTTCCTGTCTTTTCTGTTGTGTTGTAAGA
AAGTTGCTGATTGAGCGTATCCATACCCGTGATGATGGCAGGCTGCAATC
ATCATTCAGCACACGACTCTCAACGTGTTTAACGCATGTGTACTGGAAAG
TTTCAGGGCTCTTGACATGACCGGCAGAATCAGACGGAAACCAACCCTAC
CGCGAACGGCTTCGATCGTGATGATGTGAAAAGTGGAATGTCACGTGAAA
AGCCTTGGAAATTATCATGACGTTTGAGAGGCAAATTCGAAGATATGCAG
AAGAAATGGGTATCTACCTGTCGTGTTAGCAAGGGATTGTTCCTTAAAAT
CGGACGTGTGATGTAAAGAAAATGTAGACATACTTCCGTATGAAAGCATC
GGTCGGATAGAGGACTCTGCCTTAGCCTTCCGGTGGGTTAAAAAAAAAAG
ATCGGGCGTGTAAGATGTACCTGGTATTATATTCATTTCTAGGTCACCAC
GTCTATAGCGTTGCGCGTTAGGCATGCGAGTGACACACCTCCTCATTTGA
TTCAATTTTTTGCCGATGAGAGTACATATACTATACAGCTGAGATTCGAG
GTCAGCTACATATAACCTAAACGTGGGTGTGTATGATGGATCCTACTCTT
TTTTCTGATAATTATATAAGTTAATTGCCCCTGCCCCGAGCTCCCATCCT
CCCCCTTACTTGATGAGGTACCCACTGCCTCTGCCCTTGCCCCCCCCCCC
TCCCCTCCCCACGTGCACTTCGTTGTTGGGCTTATGTTTTGCTGGGTGCG
TGTGCTACTTCGCGTGGTGTCGGAGGCAGATATTGAAGGTTGCTTCGGAA
TGTTGTTCTCTCTGCTGTACAAGACGGAAAATCCTCAAGCTGCCATGCCT
GCTCTTTCCCTGGAGATCGCCACCAGCGTGCTGGATACTGTTGATGACCG
GGCACCCCTCAGACTCAAATTGTGAGTGCAATGATAAGAGAATATAGACT
GAAAATAACGGATCCAGGTGAGGTCAAGTCAAGTGGTTGTTGAGACGAAA
GCATGAACAATAAAATTGTATGCATCCGAGAAGCGAATCAAGTAGTCGCA
CTTCGTCGACTAATCCGCGACTAATTTCGAAAAATAAAACAGACTCCAGT
CAACTAATCCTACGAGTTCCGGAACGTGAAACCGACAATAGTAGACTAGT
TCGACTCGCTCCGAAACGTGGAACCAACCCGACTCTAGTCGACTAATTTC
CAAAAATAAGACCGATTACAGTAGTTGATTGATTCATCTAATTCCCGAGT
GTGTGCACATGTAAGCAAACGACTTGACAGCAACGATTCTGAGTCGTGGT
AGATTCGTGGATGTTGGATGTGTGGAAATTTTCTCGATAAAGCTGTTCTC
GTTGTATATTGCATACCTGTATTTCTTGTTGTGTTGTTACGCTTCTATTT
TTCATTTGCGTTTTATTGGCATGTGTGCGCGTGTTTATACAGTGGATTGA
CCGGTGTAGCGAATGGTCCATTTTTTAATCGGCAGGTTACGGTTTGTGAT
CGTTTGACCCATTAGAGCAGGGCAGCAACTCCACAACTGTAAATGACTCT
GACAGTCCACCGACCTACGCCCGAACGGGTAGGGTAGCTCGTGAACTGAG
CATGACTGGAAGTCTAGTCAGAGGTCTTTTAGTGGGTGCAACTCTCACAC
TGCCTACTTGCTTCGGCCGAACCGGGGTGGCGCCTATCCCGCAGAGGAAC
AAATAACTTTGTTCTGTTGAAGGAAAAGTATAAATACTTTGGTATGGAAG
CATCGGATAAAGTTTTTTTTGCCTTAGCCTTCCGGGGTTTAAAAAAAAAT
GACTATGACGGTCTTATATGTAAGTAATATCATTCGTAAAAGTACGCTAT
GCTTGAAAATTTAGATCCGATTCGTTCGTGTTGAAAGTTAGCAATTTTCG
AGCGTTCGAAAGGAAAGCTCAAAAACAGACGAGACCTGGGTGCCCAAAAC
AGATCTGCCATGGGTTACGTCCCGAGGTCCGTGGTATAATAACCTGTTGT
CTACTCTGAAGAAAAAATAAGATCCCAAAATAATATATATCTCTTGAAGC
AGATGTCACGGGATTGCGTTCCGAAAGCATTCACCGGTGTGTTGCGTGTC
GTGATGTTTGCATGGGGTGTTTGGCAGAGTGACGAATCTGTACAACATGC
TGCCGGTGCGTACGGCGGGCCAGTTGGAGGTGCTCTTGCTTGTCATCCGC
TACTCGGCCCAGGCTAAGCTTGTCGCTATGCTTTCGTCCTTCTTCGCCGG
TGTGGACGATTGGATGAAGGTGCGAGCACGCGGGGGGCAGGGGGGAGGGA
GTGTAATGTACGTAAAATGACATGACTTGAACGTGAATACCTGATAAATT
AATATAGGATGCCCCATATCATCCACCAAGCCTCGTTGGCAAGATTCAGT
TCACTGGTGATGGTGGTGGTTGTGCCCTCCCCCGTCCGCCCCTCGTCCTC
CCCCCCATTTCGTTTATAGTTTGGATGAACGTGAACACTGATGTTACTCT
TGATCTGCCTGCCTGTCTGTCTGTCTGCCTGTCCGTAGGGCTGGGATTTA
TCGGTTGCTAACAAACGACGGTTGTATCTGCTCATATCTGAGACGCTCGG
GAAGGAGGGTAAGGCAGTGGAATCTCAAAAGGTAATTGACGAGAGGGATC
AATGAAACCACAAATAATGGATGGACCGATAGATGGGGTATGTCGAAGTG
CGCTTCGTGGAACACATGGTACCCTCCCCCCTATCTCTCATTTGGTATAG
TTTGCTAATACGTATATACAAGTGAAGTTTCAGGTGAGCTGTATTACCTC
AAGATTGATGGGTATGATTAGCGTCATTGCGTATTGGCATCTAAAGGTCT
ATTAACCGTGGTAAGCAGGTTTACTTGCGAATGAGAATCTTCGTGGGTGA
AAGCCCCTTACTGATGTATGCAACTGAACTTTGGAGTCAACCGCATTTCA
GCCCCCCCCGCATCCCGCCACTACCACCGCTCCCTATTTATAGTATGCTA
TTTCAAGTAGAGCAAAATGTTTTCGGAGAAATGAAAGTTGCTTTGTGTAT
ATGTCGATGTACTGAATGCTGGTCCGAGATATCATGAAATAGAAACATTT
GAAAAAAAAACCAATGTGACGACGTGGACGAAAGTACGTACGTAGTACAT
GAGGCATCTGATGTTGATTGGGCAAGCCACTCTCTCAGGAGAGCGTTATG
CTCCAATATTGACCCCCTGCTGTCGTAGTATGTACAGAAGACTTTGGGCT
CTTTGATACATCTTTGTCTCTTGTATTGATATTTATATATATATTGCGAG
TATCCTATTATGCGACACCAAATCAACGAAGATTTTAATATATATTTTTG
GCTCTCTTTTTTCCCTCACCCGTCGTCACATACCCACACGCATTAAAAAA
ACATCCGAATCGGATCGGATCGGAACGGAACGGTTTGTTTTGTAGTTTTT
GATGAAGTACTTGACTACTTTCGACGAGGCATCGGCAAGTGAGCTGGCAG
AGGTCAAGCCAGCGGCGGTGAGGGGGTGTATTGGGGCGGTCAAAGCTCCT
ATCGTCAGCTTCACCGAACAGGTAAGTGATGTAATTTGTATTTTAACTAC
GGAATACTAGTATCGTATACCCACGACTACGCCCATGTGGTATGTAGTGT
CCGTGTGATGTCCTCGTGTCCATTTAGTCATCATTCAGAATCCATCACCC
ACGCAAGACGGCTTGCTGCGCTCGAATGTAGATACAACTGCCATAATAAA
GATTCGTTATTTGGAATTACTCAAGCATAGTATTTGAAAATATTCCGAAA
ATTGTTGTCATGATCTTGGATCGCCTCTTGTCTAATTTTTTCCAAGTCTA
GACCTGTGCTGGATGACACAAAGCTAGCTTTGTTAATTCAGTGGCTGAAG
GTTTTCATGTTAACGGTGGCTTTTGAAGGGGGAGGGGATAAACGTTATTT
TCGTCGAGCTATGGTCTGGAGATTGACTACCTTGCCCTTGCGCAGGACAC
AAAATGTATAGACGAGAAGTAGCCAGCGATACACCGCCAGTTTTGCTTTT
CGGAGTGTGTGGATTTATTTTTCCCCGGCAATTTTGAGCCCGAGCTCCTC
GAGAAGGTTTGTCCTTTCTCCTCCGCCGCGATTTTTTTTTTTTTTTTTCC
CCTGAAATAATAGGCTCCATCGTCTAATGTATAAATGGTAAACAAAAATG
ATCCCCAAAGATCAATCACCGCAAGGGAGAGCGTCACTCATCACTGCAAG
TGGCTCTCATTTCTAGGGTGTTTTTTTAGGCTATGACGAGAATAATAGTT
TTTGCTCGCTCCGTCTTTGCCATCGCCGCCGCCACCTCCACTATCACCAC
CATGAACAATAACTTTGTAAACCGTACTGTAGTGAGGGTGACATGTCTTT
CTTTTGCCTTGATTTCCAATGACTGGTACATCCCAACTAAGCATTGTTAA
TACCGATGATGGCGGCAATACTCAAATGATGATGATGGTGATTATGATAA
TCATGACACAACACCTGTGGGCATGGCGGGGGTGTACGGTACAGCACAAC
CTCCTGGGAATGGCGGCGGTGGCTCAGTTGAAGGACGACCCCAAGTACGC
GGGCGTGCACCAGCTGCTGCATATATTTTCCGTGGAGAAGCTGGAGGAAT
ATATGGCTTTCCACGAGGTATGTGTAGATATATGTGTGAACTGTGTGTGT
ATTAAGTCAGTCGTCCACCTGTGACCGGACAGGCAGGGAGTGTTGAGCAT
GTTCTTGCAGCATGGGAGGAGTCACTCGTGAGAGCGTCTTTCCAGTTGTC
GTTGACTAAAATTAATTGCGTGTGGACACTTGTGTCTATTTTCTTGCCGG
TTTCTTATATTGGGTTTTATGTCAAACCAGCCCATGGTTGTTGATGTCAA
GGATTCTGAAGTATGTTTGAGAGAGTGATTCTTGCGTGCATGCACGCCCG
CAGTGAGAGGATGTGCGGCACGCACACATGCTCACAGCGAGTGTATGGTA
TGATGGCGTCCTACTGTAGTACCTTATGTTGCTATTGTTATAGTCCATTT
TTTGTAGGCCACCGAAATATTCCGATTTTCGAAAGGAAAGGCGTGTTGAG
ATGTGCGCGTTGTGATGTTTTCGGTCAAATGCAGAAACATGCGGTGACGC
TGGCGGAGAACAAAATTGACCACGACAGCTGCGTTTCCAGCATGCGGTTG
CTCTCGCTGTGCTCGCTTGCCACTGAGCATGAGGAAATTCCCTACCAGGT
ACTTTGTCTCTGTGATACAGGAGTAGTAGACGCACTTTATTTTCATTTTC
GCGACCATCTTATCTTATCAGTAAATCTTACTGTGTAGTTTTTTTGTTTT
TTTTTTCAAGTAAAAAAAAAGGTATTATCTTTGTAGTATTTTTTGTGATA
TTCTGAAGAGGAGGAGGTTCTCAGATGTGCTGGACATTTTGTTTGACCAC
AATTACATGAAAAGCCTTCCACTTATTTTGTGATTTTTTTTTTTCCTGTT
TTTTTTTCACAAGTTTGTCGTCATTGTTTAATGGCAATGCTGTTCAGAAA
TAACAATCACGACCTTATCAAGGAGGATGTAGGTATAACCCCTATGGTAA
CGCGGTCTTGTCGGTGGTTAAAAAAATTGCGAATACTTGATTTATTTATA
TACTTTTAACACCGTAGGCTAACGTGATGGTCGTGTCGGAACTCTTTTTC
GAGTCTTAACTCAAGTAAATTTAAATGCAGAATCTTGTCAACGATTTTTC
ATCTTCAAACAGCTGACAAAAGTTATCTCGGCTCAAGTAAGTTAAAAAAA
AAAAAAAAAAAGTCTCTGAGCGGTCAGCTCTACATGGCCATCACGCCCAG
TCAACAAGACAGCACAGACAGACAAACCAACAACTTAGTACAGTGTGATG
CACCCAGGAATAACCACAGGTAGCCGCGGCCACACTGCAGGATAGATCAA
CTGTACAGAAAGCAGCCCTCCACTGAGCTACATACTCGACGCTAAAATGA
ACGGTGATTTGCGCCTACATGCAAGGAATGTTGAGCAAATCACGACGTAG
TCGCCGTCATGGGCATAGCCGTGACCTTTCCACTATATATATTATATTTG
ACGATAGCTTTCCCGGTAAAATACCGGATCAATGGTGCACCGTGTAAAGG
TTTTATTTCACCGTGTATTTTTTTTTAGTTCTTTCTTTTTTATTTTCAAA
ATTACAATCAAAGGTAGTGGCAGAAACGCTTAAGGTGGAGGGAGACGAAG
CCGTGGAAGAGTGGGTGCTGCGCGCCATCCAGACGGGGTTGATGGAGGCT
AAGATGGACCAGATGCAAAGAGTGGTTGTGATCAGGAGGTGCACCAACCG
CGTCTTTGGCCCCGAGCAGTGGAAGGTGCGCGATTTTTTTATATATATAT
ATATATATATATATAATTTTACTCCGGACATTATAGGTGGTTGGATCGGT
GAATTGGATTTTGATAAATAGTTTTTTTTTACCCAAAAAATGTCGCATCA
ATTTTGTCGGGCTTTCGACTGGAGGAGTGTGAGTGGGTTGTGGTATCAAC
TGAATGAATGCCTATCTGTATTTTGTTGGTTCAATTGCCTTTTTTTTTTT
CTCTTTTTTTTTCTTTTTTAAAGCACATCGGTGGTTGTTGTCGAACCAAC
GCTTTTGTTTCAACCATGATTATGTTTGAGTTGTGCGGGGCGCGTTTTTC
ATTTTTGTTGCTGACTGCTATTAATAACTAGATAAAAACACGAAATGGTT
TTCATATGACAGGTAGACACCCTCGTGTGTGTTTTTTTTGTTTTTTTTTC
GTTCGTAAGTTAACCCTGCCATGGTCAGCTGAAACTGGAGCTGTGATGCT
CATATAATTATGGAGCTGACTTGAAAAAAATAAGTTGTTTACACTTAGCG
GCAACATTACATCACTGACGGATTGTACTTAGCGAGATAACCTGTAGCGA
TAGTTGGAACGCCAGCAGGGTTTTTTGGTTGTGCTTGAAATGTGATCTAC
TCGGACAAGTTGATTGATGATGCAGCATTCTTGCCCTCTCCCTCCCGTTC
CTCCTAAGGTCGGTGTTTCTCCATGATAAGCAAAGGGTTGCTTTCCCGTC
AGAAATGGCTTTCTTGATTTTTATCTTGGTACACTCCTTTCTTGACGAAG
AATGAAGGAGAAGGACTCAAAGGTTGTCTTTTTTGTTTTCATCATTTTGG
CCAAGTTGGCAGGCAATAGTGTTACCGCAAAGATAACATAGAAGAGTAAA
CGAAATTATGGACGAGTCGGGAAGAAAAATCTCTCTTTTTTTTGGTCCCA
TATATGTGCAACTCTCACTGCCTGCTCGTTCGCCGTTGTCGTTGTCGTTG
TCGTTGGTAACTGCAACGACGTCCTCATCTACTCTGATGTGTGGTGTGGT
GTGGTGGGTTTGTCGTGTTGTGATGATAGACCCTTCAGAAGAAGCTGGGA
ACGTGGAGCTCGAACGTGCAAATGCTGCTCTCAGCGATTCAGAAAAGCAA
TGAGCGGTGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig2863:577..14636- >mRNA_H-paniculata_contig2863.7804.1 ID=mRNA_H-paniculata_contig2863.7804.1|Name=mRNA_H-paniculata_contig2863.7804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2382bp|location=Sequence derived from alignment at H-paniculata_contig2863:577..14636- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGGCGATGGCGGTATCAGCACAGCTGGTGAACTTGTCTTCAAAGGCGGA GCTGAAGCTTGTGGAAGCGGTGGCTGGGGCGATGCCCTCTGGGCAGATGG CGATGGCGGTATCAGCACAGCTGGTGAACTTGTCTTCAAAGGCGGAGCTG AAGCTTGTGGAAGCGGTGGCTGGGGCGATGCCCTCTGGGCAGGCGGAGTT TTCGAAGGCATGTACGGCGCTCGTCACGAATGCTAACGCGCCTGACCTGA TAAGGAAGATTCTGCAGCAACGGGAGTCTATCCTGAAAATGGAGAGCATA GACGGCGGAGTTTTCGAAGGCATGTACGGCGCTCGTCACGAATGCTAACG CGCCTGACCTGATAAGGAAGATTCTGCAGCAACGGGAGTCTATCCTGAAA ATGGAGAGCATAGACGATATTGAAGGTTGCTTCGGAATGTTGTTCTCTCT GCTGTACAAGACGGAAAATCCTCAAGCTGCCATGCCTGCTCTTTCCCTGG AGATCGCCACCAGCGTGCTGGATACTGTTGATGACCGGGCACCCCTCAGA CTCAAATTATATTGAAGGTTGCTTCGGAATGTTGTTCTCTCTGCTGTACA AGACGGAAAATCCTCAAGCTGCCATGCCTGCTCTTTCCCTGGAGATCGCC ACCAGCGTGCTGGATACTGTTGATGACCGGGCACCCCTCAGACTCAAATT AGTGACGAATCTGTACAACATGCTGCCGGTGCGTACGGCGGGCCAGTTGG AGGTGCTCTTGCTTGTCATCCGCTACTCGGCCCAGGCTAAGCTTGTCGCT ATGCTTTCGTCCTTCTTCGCCGGTGTGGACGATTGGATGAAGAGTGACGA ATCTGTACAACATGCTGCCGGTGCGTACGGCGGGCCAGTTGGAGGTGCTC TTGCTTGTCATCCGCTACTCGGCCCAGGCTAAGCTTGTCGCTATGCTTTC GTCCTTCTTCGCCGGTGTGGACGATTGGATGAAGGGCTGGGATTTATCGG TTGCTAACAAACGACGGTTGTATCTGCTCATATCTGAGACGCTCGGGAAG GAGGGTAAGGCAGTGGAATCTCAAAAGGGCTGGGATTTATCGGTTGCTAA CAAACGACGGTTGTATCTGCTCATATCTGAGACGCTCGGGAAGGAGGGTA AGGCAGTGGAATCTCAAAAGTTTTTGATGAAGTACTTGACTACTTTCGAC GAGGCATCGGCAAGTGAGCTGGCAGAGGTCAAGCCAGCGGCGGTGAGGGG GTGTATTGGGGCGGTCAAAGCTCCTATCGTCAGCTTCACCGAACAGTTTT TGATGAAGTACTTGACTACTTTCGACGAGGCATCGGCAAGTGAGCTGGCA GAGGTCAAGCCAGCGGCGGTGAGGGGGTGTATTGGGGCGGTCAAAGCTCC TATCGTCAGCTTCACCGAACAGCACAACCTCCTGGGAATGGCGGCGGTGG CTCAGTTGAAGGACGACCCCAAGTACGCGGGCGTGCACCAGCTGCTGCAT ATATTTTCCGTGGAGAAGCTGGAGGAATATATGGCTTTCCACGAGCACAA CCTCCTGGGAATGGCGGCGGTGGCTCAGTTGAAGGACGACCCCAAGTACG CGGGCGTGCACCAGCTGCTGCATATATTTTCCGTGGAGAAGCTGGAGGAA TATATGGCTTTCCACGAGAAACATGCGGTGACGCTGGCGGAGAACAAAAT TGACCACGACAGCTGCGTTTCCAGCATGCGGTTGCTCTCGCTGTGCTCGC TTGCCACTGAGCATGAGGAAATTCCCTACCAGAAACATGCGGTGACGCTG GCGGAGAACAAAATTGACCACGACAGCTGCGTTTCCAGCATGCGGTTGCT CTCGCTGTGCTCGCTTGCCACTGAGCATGAGGAAATTCCCTACCAGGTAG TGGCAGAAACGCTTAAGGTGGAGGGAGACGAAGCCGTGGAAGAGTGGGTG CTGCGCGCCATCCAGACGGGGTTGATGGAGGCTAAGATGGACCAGATGCA AAGAGTGGTTGTGATCAGGAGGTGCACCAACCGCGTCTTTGGCCCCGAGC AGTGGAAGGTAGTGGCAGAAACGCTTAAGGTGGAGGGAGACGAAGCCGTG GAAGAGTGGGTGCTGCGCGCCATCCAGACGGGGTTGATGGAGGCTAAGAT GGACCAGATGCAAAGAGTGGTTGTGATCAGGAGGTGCACCAACCGCGTCT TTGGCCCCGAGCAGTGGAAGACCCTTCAGAAGAAGCTGGGAACGTGGAGC TCGAACGTGCAAATGCTGCTCTCAGCGATTCAGAAAAGCAATGAGCGGTG AACCCTTCAGAAGAAGCTGGGAACGTGGAGCTCGAACGTGCAAATGCTGC TCTCAGCGATTCAGAAAAGCAATGAGCGGTGA back to top
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