prot_H-paniculata_contig28615.7798.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28615.7798.1
Unique Nameprot_H-paniculata_contig28615.7798.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length69
Homology
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Match: D7FLP3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP3_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 5.910e-26
Identity = 58/69 (84.06%), Postives = 60/69 (86.96%), Query Frame = 0
Query:    1 MQCSDAAGEASAIASQAEAYWTSGRVSASEMAVMYRTNAQSRSFEEAFLRRALPFVVVGAQRFYERREV 69
            M CSDAAGEA A+A   E YWTSGRV  SEMAVMYRTNAQSRSFEEA LR+ALPFVVVGAQRFYERREV
Sbjct:  502 MVCSDAAGEAEAVAHHLELYWTSGRVQPSEMAVMYRTNAQSRSFEEACLRKALPFVVVGAQRFYERREV 570          
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Match: A0A835Z3L0_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L0_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 6.050e-16
Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    1 MQCSDAAGEASAIASQAEAYWTSGRVSASEMAVMYRTNAQSRSFEEAFLRRALPFVVVGAQRFYERREV 69
            M C +AA EA+ IA Q   YWT G V  SEMAVMYRTNAQSR+ EEAFLR+ +P+ VV  Q+F+ RREV
Sbjct:  505 MTCYNAAQEAAEIAKQVSRYWTRGTVPLSEMAVMYRTNAQSRALEEAFLRQGVPYRVVDGQKFFARREV 573          
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Match: A0A895XIG5_9ACTN (ATP-dependent DNA helicase n=1 Tax=Natronoglycomyces albus TaxID=2811108 RepID=A0A895XIG5_9ACTN)

HSP 1 Score: 67.4 bits (163), Expect = 1.780e-11
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    9 EASAIASQAEAYWTSGRVSASEMAVMYRTNAQSRSFEEAFLRRALPFVVVGAQRFYERREV 69
            EA  IA Q +    SG+ + S+MA+ YRTNAQSR+FEE F+RR +P+ VVG  RFYER+EV
Sbjct:  362 EAGWIAKQIDDLTDSGKATFSQMAIFYRTNAQSRAFEEVFVRRGIPYKVVGGVRFYERKEV 422          
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Match: A0A7C5RQI7_9CHLR (DNA helicase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C5RQI7_9CHLR)

HSP 1 Score: 65.9 bits (159), Expect = 6.180e-11
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    9 EASAIASQAEAYWTSGRVSASEMAVMYRTNAQSRSFEEAFLRRALPFVVVGAQRFYERREV 69
            EA+ +AS+ E+   +G+ + S+ AVMYRTNAQSR  EEAF+ R +P+ VVG  RFYERREV
Sbjct:  332 EAAFVASEVESLVATGQYTFSDFAVMYRTNAQSRPLEEAFMIRGIPYRVVGGLRFYERREV 392          
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Match: A0A7V2LF64_9CHLR (DNA helicase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7V2LF64_9CHLR)

HSP 1 Score: 65.5 bits (158), Expect = 8.440e-11
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    9 EASAIASQAEAYWTSGRVSASEMAVMYRTNAQSRSFEEAFLRRALPFVVVGAQRFYERREV 69
            EA  + S+ E   TSGR  A + A+MYRTNAQSR+ EE F+R   P+ +VGA RFYERREV
Sbjct:  327 EAHFVVSEIEKLVTSGRWGAGDCAIMYRTNAQSRALEETFVRYGFPYKLVGATRFYERREV 387          
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Match: A0A535D503_9CHLR (DNA helicase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535D503_9CHLR)

HSP 1 Score: 65.5 bits (158), Expect = 8.510e-11
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    9 EASAIASQAEAYWTSGRVSASEMAVMYRTNAQSRSFEEAFLRRALPFVVVGAQRFYERREV 69
            EA+A++++ E       VS  E AV+YRTNAQSR+FEEAFLRR +P+ +VG  RFY+RREV
Sbjct:  605 EAAAVSNEVENLIGREGVSLGECAVLYRTNAQSRAFEEAFLRRGIPYQLVGGVRFYDRREV 665          
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Match: UPI0018ED7A41 (DNA helicase PcrA n=1 Tax=Glycomyces salinus TaxID=980294 RepID=UPI0018ED7A41)

HSP 1 Score: 64.7 bits (156), Expect = 1.580e-10
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    9 EASAIASQAEAYWTSGRVSASEMAVMYRTNAQSRSFEEAFLRRALPFVVVGAQRFYERREV 69
            EA+ +AS+ +    +G+ S  ++AV YRTNAQSR+FEE F+RR +P+ VVG  RFYER+EV
Sbjct:  336 EAAWVASRVDELVDAGQTSFGDVAVFYRTNAQSRAFEEVFVRRGIPYKVVGGVRFYERKEV 396          
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Match: A0A543AWY3_9ACTN (ATP-dependent DNA helicase n=1 Tax=Stackebrandtia endophytica TaxID=1496996 RepID=A0A543AWY3_9ACTN)

HSP 1 Score: 64.7 bits (156), Expect = 1.580e-10
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0
Query:   18 EAYWTSGRVSA---------SEMAVMYRTNAQSRSFEEAFLRRALPFVVVGAQRFYERREV 69
            EA W + R+ A         S++AV YRTNAQSR FE+AF+RR LP+ VVG  RFYERREV
Sbjct:  346 EALWVADRIDALADSQDVKPSDVAVFYRTNAQSRVFEDAFIRRGLPYKVVGGVRFYERREV 406          
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Match: A0A6N7I591_9PSEU (ATP-dependent DNA helicase n=1 Tax=Pseudonocardiaceae bacterium TaxID=1873463 RepID=A0A6N7I591_9PSEU)

HSP 1 Score: 64.3 bits (155), Expect = 2.160e-10
Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    9 EASAIASQAEAYWTSGRVSASEMAVMYRTNAQSRSFEEAFLRRALPFVVVGAQRFYERREV 69
            EA+ +A++ +A   SG  S S++AV YRTN QSR FEE F+R  LP+ VVG  RFYERREV
Sbjct:  353 EAAFVAAEIDALADSGEASYSDVAVFYRTNNQSRVFEEIFIRLGLPYRVVGGMRFYERREV 413          
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Match: A0A497AZB6_9CHLR (DNA helicase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497AZB6_9CHLR)

HSP 1 Score: 63.9 bits (154), Expect = 2.940e-10
Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 0
Query:   24 GRVSASEMAVMYRTNAQSRSFEEAFLRRALPFVVVGAQRFYERREV 69
            G  S  + AVMYRTNAQSR+ EEAFLRR +P+ +VGA RFYERRE+
Sbjct:  340 GLYSPGDFAVMYRTNAQSRTLEEAFLRRGMPYQLVGATRFYERREI 385          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28615.7798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP3_ECTSI5.910e-2684.06DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835Z3L0_9STRA6.050e-1662.32DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A895XIG5_9ACTN1.780e-1157.38ATP-dependent DNA helicase n=1 Tax=Natronoglycomyc... [more]
A0A7C5RQI7_9CHLR6.180e-1157.38DNA helicase n=1 Tax=Chloroflexi bacterium TaxID=2... [more]
A0A7V2LF64_9CHLR8.440e-1157.38DNA helicase n=1 Tax=Dehalococcoidia bacterium Tax... [more]
A0A535D503_9CHLR8.510e-1157.38DNA helicase n=1 Tax=Chloroflexi bacterium TaxID=2... [more]
UPI0018ED7A411.580e-1054.10DNA helicase PcrA n=1 Tax=Glycomyces salinus TaxID... [more]
A0A543AWY3_9ACTN1.580e-1057.38ATP-dependent DNA helicase n=1 Tax=Stackebrandtia ... [more]
A0A6N7I591_9PSEU2.160e-1057.38ATP-dependent DNA helicase n=1 Tax=Pseudonocardiac... [more]
A0A497AZB6_9CHLR2.940e-1067.39DNA helicase n=1 Tax=Chloroflexi bacterium TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..62
e-value: 9.5E-17
score: 63.4
NoneNo IPR availablePANTHERPTHR11070:SF47ATP-DEPENDENT DNA HELICASE REPcoord: 2..69
IPR014017UvrD-like DNA helicase, C-terminalPFAMPF13361UvrD_Ccoord: 3..69
e-value: 3.5E-8
score: 33.2
IPR014017UvrD-like DNA helicase, C-terminalPROSITEPS51217UVRD_HELICASE_CTERcoord: 1..69
score: 8.616
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 2..69
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28615contigH-paniculata_contig28615:158..364 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28615.7798.1mRNA_H-paniculata_contig28615.7798.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28615 158..388 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28615.7798.1 ID=prot_H-paniculata_contig28615.7798.1|Name=mRNA_H-paniculata_contig28615.7798.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
MQCSDAAGEASAIASQAEAYWTSGRVSASEMAVMYRTNAQSRSFEEAFLR
RALPFVVVGAQRFYERREV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014017DNA_helicase_UvrD-like_C
IPR000212DNA_helicase_UvrD/REP
IPR027417P-loop_NTPase