prot_H-paniculata_contig2857.7783.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2857.7783.1
Unique Nameprot_H-paniculata_contig2857.7783.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1278
Homology
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BLAST of mRNA_H-paniculata_contig2857.7783.1 vs. uniprot
Match: D7FY03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY03_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.530e-6
Identity = 62/189 (32.80%), Postives = 76/189 (40.21%), Query Frame = 0 
Query:  666 NKGMEVRGSSAPPSE---GGRSLTQEMDGICADIVTSTDLVSSIQVMAEDTAALCGVPTN-----IPTPSSPTFDNPTS----PRPF-----------------------FGXXXXXXXXRTVAASPKSPASRGKG----------------------TSTRKGKYQVKDSFNRLRGWINGGFASGNSR 797
            ++G     SSAPP E   GG S  + ++GICADI+T +DL++S Q   E    L GVP +      P P+       TS    PR                          G        R  A +  +   RGKG                       S RKGKYQVKDSFNRL+GWINGGF     R
Sbjct: 1167 SRGCRRLSSSAPPPELRDGGLSSAR-VEGICADIITPSDLLTSAQEQVEGAPPLSGVPASSSSSTTPRPARGHHRRSTSAGMLPRSIDEGVMDPAVELADAAMTLSGVRTSGGAAEDGRARRGAVARGTARERGKGGGSFDRRSMVGGXXXXXXXXASPSPRKGKYQVKDSFNRLKGWINGGFTGNGGR 1354
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2857.7783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY03_ECTSI2.530e-632.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2857contigH-paniculata_contig2857:1174..15378 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2857.7783.1mRNA_H-paniculata_contig2857.7783.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2857 995..15968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2857.7783.1 ID=prot_H-paniculata_contig2857.7783.1|Name=mRNA_H-paniculata_contig2857.7783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1278bp
MTATGPRDSVTAVVAVATTLSATGKSNEMTMMRSGVAAVGNGRSSDRGSC
GDGGCGGGGGSGPGLGREASYGTLSQNLFSNTASGVGNMNNFDDEDIENG
GRGGNYPRRSEESTYFSSTTSTLIVPEPYPPSRDSLFNNVSSSSRGSGSS
GISCPPAFAVGGGGGGGESRPLAAAAAGVEAAVVRGGVPRVGASRGGNSG
GAALAVGVTRVDLGKVSRGRVPRVDSEKLEYNKEQNREVAANLEAVAAEL
GRRKQLLAWEGADGAAAVVALVSGVRAGSEEEPTKASEAKARSGHPVGVT
TGGGKGLPRAQELDEGEKSKWRPAQLQSSEDALVLPPPLDIVPVVPTAKS
PAAIPLTGSIINGPDCTVADAPTDGAVTAGGTSERKFVTEGSPVSTPRLD
PTRAMSAKRKNDKGSGTTGGKGEIGVIAGDATAVGGIGMALGKSSDTGVP
AAAAVSSPSPGRTRKGQPTPLGDERDHAKDMDKDKDKDQDNSKGSGSSSG
SGGGGGGGSPSREWSPRVGGGQVTAATVAAAAAATMLSASPKRTVPRQTS
SSSNTDAATVIAGGARTLGGPGPVAASMMMPPPARGRESPLQVHPPSPVG
SSPREVPLASGGRTPRTPDVIAPSSASGFGRTSVTPQRLHHSRQKAAAAA
VAAAGGVGNGRGRQINKGMEVRGSSAPPSEGGRSLTQEMDGICADIVTST
DLVSSIQVMAEDTAALCGVPTNIPTPSSPTFDNPTSPRPFFGGGGGDSSS
RTVAASPKSPASRGKGTSTRKGKYQVKDSFNRLRGWINGGFASGNSRRNN
NNNKSTSPTTPKSSKRGSVGKGRGFSERVIAGGDKASADARRESGAAAST
PGAGTPTTTTTTAATTTTSRRGSVGKSTRLRAVPQNPPVRVAGRDSFKGG
SAASAARKLGAGGTIGGGTRQRLSPRVTGRTTQGTGGGGGGGGGGAGSPH
ATRDTSASSSVATLTPTGTTVTTPSLSTPTLANITPSSQGSHEVWMVPTG
SPAVQPSPGQYQQHTHACPSPAGWGTSGATTALDGGVTITPRRTIKASAS
AAATTAFAAAGSRSPTFQPSPRQHQQHTTHACPSPAGWGTSGAASTTLDG
CVTVTPRKTIKAPASAAATAAIAAAVSPAAGRMALGGVAAGSVGAAVPSR
AKTAKVAKSLGATVPALSAASRVTNRAGQASSGTLGTRVGERSLNGKKKS
VRSGGAATGSSSSSSSGTKQQQQRAVEPSSAPMKSPKGQVMGHGRRGVEP
SPPPPQSVKLSRKGGSALSLLASPKKW*
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