prot_H-paniculata_contig28557.7778.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28557.7778.1
Unique Nameprot_H-paniculata_contig28557.7778.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: D7G0I0_ECTSI (Rtdr1 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I0_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 1.120e-45
Identity = 92/137 (67.15%), Postives = 106/137 (77.37%), Query Frame = 0
Query:    8 GYPAKLVGKAVDEALDLQPLALKVLCNVIKNEVGLERALAASLVETLIKLLGNDRPPEVQREACVTLTLACFDDMAKIIAIQNNGVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSER 144
            GYPA+LV KAV+E  +LQPLAL+VLCNV K+  GLE ALAASLVE LI LL   RP EVQREA VTL +ACFDDMAKIIAIQNNGV+ L+ L+S A  +VR+AAMGALMMITTVDAG+    STS +     AL+ R
Sbjct:  157 GYPARLVDKAVNETEELQPLALRVLCNVTKHRGGLEAALAASLVENLIGLLTEGRPVEVQREASVTLAIACFDDMAKIIAIQNNGVSMLAELVSKAETDVRSAAMGALMMITTVDAGE----STSTSPRRTAALTNR 289          
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: A0A836CN86_9STRA (Rtdr1 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN86_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.530e-28
Identity = 73/146 (50.00%), Postives = 86/146 (58.90%), Query Frame = 0
Query:    2 RALVQAGYPAKLVGKAVDEALDLQPLALKVLCNVIKNEVGLERALAASLVETLIKLLGNDRPPE--------------VQREACVTLTLACFDDMAKIIAIQNNGVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSA 133
            RALV AGYP +LV KA DE   L+P  L VLCNV+    G+E ALAAS VE L++LLG                    V R A   L   CF ++ KI+AIQ +GV RL+ALL      V AAA+GALM ITTVDAGKR  L+T A
Sbjct:  149 RALVHAGYPERLVAKARDETDALKPAVLDVLCNVVHCREGVEAALAASAVEALVELLGGPAXXXXXXXXXXXXXXXXXVLRGAAAALRELCFSEIGKIVAIQCDGVARLAALLRCGDAGVHAAALGALMTITTVDAGKRAFLATGA 294          
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: A0A7S3UQ37_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQ37_HETAK)

HSP 1 Score: 62.8 bits (151), Expect = 1.850e-9
Identity = 38/94 (40.43%), Postives = 52/94 (55.32%), Query Frame = 0
Query:   70 ACVTLTLACFDDMAKIIAIQNNGVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSERSDVLLLNSLKLVASIAAHP 163
            A   L   CF +MAK+ AIQ++GV  L  LL     E+RAAA+GALM +TTVD GK+ ++                    LN++K VA++AA P
Sbjct:    1 AARALARLCFAEMAKVTAIQHDGVDTLVELLRDPDAEIRAAALGALMGVTTVDEGKKAMVPAGXXXXXXXXXXXXXXXXXLNAVKTVANVAAFP 94          
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: A0A4P9XBI4_9FUNG (Uncharacterized protein n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XBI4_9FUNG)

HSP 1 Score: 62.8 bits (151), Expect = 2.070e-8
Identity = 48/158 (30.38%), Postives = 79/158 (50.00%), Query Frame = 0
Query:   16 KAVDEALDLQPLALKVLCNVIKN---EVGLERALAASLVETLIKLLGNDRPPEVQREACVTLTLACFDDMAKIIAIQN-NGVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSERSDVLLLNSLKLVASIAAHPGNNYQL 169
            K + E L+ Q L L++L   +++    + +  AL   +++ L  L+ +D P  V+  AC  +    F    + +AI +   +  L  LLS     VRAAA GALM+IT    GKR ++  +A    +  L + S+ +LLN LKL+ ++        QL
Sbjct:  199 KLLTERLENQVLLLEILEQCLRHGRPSLVIREALDHHVMDALAALIKDDAPSAVKAAACRGIMALAFVPEGRAVAIAHPRAIDHLIVLLSDHKSAVRAAAAGALMIITIDVEGKRAVVRANAVVRLIAMLDDSSEAVLLNVLKLMTNMTEDYRGRLQL 356          
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: A0A7S2V2I4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2I4_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 6.920e-7
Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   92 GVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSERSDVLLLNSLKLVASIAAHP 163
            GV  L  LLS  A ++R+AA GALM+ITTV+ GK  +L+T      V  L++   ++ LN LK+++SIAAHP
Sbjct:    2 GVGVLVHLLSDEAHQIRSAAAGALMLITTVEQGKDDMLATDGPAVIVDLLTDDQRLVKLNCLKVISSIAAHP 73          
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: A0A024G614_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G614_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.050e-6
Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 0
Query:   16 KAVDEALDLQPLALKVLCNVIKNEVGLERALAASLVETLIKLLGN---DRPPEVQREACVTLTLACFDDMAKIIAIQNNGVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSERSDVLLLNSLKLVASIAAHPGNNYQL 169
            K++    +++  AL +L NV+ +  GLE   A  L    ++L           VQ  AC  +    + + AK +A++   V  LS LL+    +V+ A +GALM +   D  K +I++ ++     + L    D + LN+LKL+A +AAHP    QL
Sbjct:  219 KSISNKSEIRIRALHLLRNVVND--GLESTSALMLDLEAMQLCSKYIRHANYHVQVAACNVIAAIGYIERAKGVAVEFGIVKELSLLLTDRNRKVQGACVGALMNLAINDEAKGIIIANNSLLVVPQLLECSEDSIKLNTLKLIAIVAAHPEARKQL 373          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G0I0_ECTSI1.120e-4567.15Rtdr1 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A836CN86_9STRA2.530e-2850.00Rtdr1 protein n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A7S3UQ37_HETAK1.850e-940.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4P9XBI4_9FUNG2.070e-830.38Uncharacterized protein n=1 Tax=Caulochytrium prot... [more]
A0A7S2V2I4_9STRA6.920e-747.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A024G614_9STRA7.050e-629.94Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..170
e-value: 2.7E-14
score: 54.7
NoneNo IPR availablePANTHERPTHR15599:SF1RADIAL SPOKE HEAD 14 HOMOLOGcoord: 12..165
NoneNo IPR availablePANTHERPTHR15599RTDR1coord: 12..165
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 10..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28557contigH-paniculata_contig28557:262..3060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28557.7778.1mRNA_H-paniculata_contig28557.7778.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28557 259..3060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28557.7778.1 ID=prot_H-paniculata_contig28557.7778.1|Name=mRNA_H-paniculata_contig28557.7778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MRALVQAGYPAKLVGKAVDEALDLQPLALKVLCNVIKNEVGLERALAASL
VETLIKLLGNDRPPEVQREACVTLTLACFDDMAKIIAIQNNGVTRLSALL
STAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSERSDVLLL
NSLKLVASIAAHPGNNYQLGLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold