|
|
Homology
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: D7G0I0_ECTSI (Rtdr1 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I0_ECTSI) HSP 1 Score: 160 bits (405), Expect = 1.160e-45 Identity = 92/137 (67.15%), Postives = 106/137 (77.37%), Query Frame = 1
Query: 25 GYPAKLVGKAVDEALDLQPLALKVLCNVIKNEVGLERALAASLVETLIKLLGNDRPPEVQREACVTLTLACFDDMAKIIAIQNNGVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSER 435
GYPA+LV KAV+E +LQPLAL+VLCNV K+ GLE ALAASLVE LI LL RP EVQREA VTL +ACFDDMAKIIAIQNNGV+ L+ L+S A +VR+AAMGALMMITTVDAG+ STS + AL+ R
Sbjct: 157 GYPARLVDKAVNETEELQPLALRVLCNVTKHRGGLEAALAASLVENLIGLLTEGRPVEVQREASVTLAIACFDDMAKIIAIQNNGVSMLAELVSKAETDVRSAAMGALMMITTVDAGE----STSTSPRRTAALTNR 289
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: A0A836CN86_9STRA (Rtdr1 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN86_9STRA) HSP 1 Score: 117 bits (294), Expect = 4.800e-29 Identity = 74/148 (50.00%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 1 GMRALVQAGYPAKLVGKAVDEALDLQPLALKVLCNVIKNEVGLERALAASLVETLIKLLGNDRPPE--------------VQREACVTLTLACFDDMAKIIAIQNNGVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSA 402
G RALV AGYP +LV KA DE L+P L VLCNV+ G+E ALAAS VE L++LLG V R A L CF ++ KI+AIQ +GV RL+ALL V AAA+GALM ITTVDAGKR L+T A
Sbjct: 147 GTRALVHAGYPERLVAKARDETDALKPAVLDVLCNVVHCREGVEAALAASAVEALVELLGGPAXXXXXXXXXXXXXXXXXVLRGAAAALRELCFSEIGKIVAIQCDGVARLAALLRCGDAGVHAAALGALMTITTVDAGKRAFLATGA 294
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: A0A7S3UQ37_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQ37_HETAK) HSP 1 Score: 62.8 bits (151), Expect = 1.890e-9 Identity = 38/94 (40.43%), Postives = 52/94 (55.32%), Query Frame = 1
Query: 211 ACVTLTLACFDDMAKIIAIQNNGVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSERSDVLLLNSLKLVASIAAHP 492
A L CF +MAK+ AIQ++GV L LL E+RAAA+GALM +TTVD GK+ ++ LN++K VA++AA P
Sbjct: 1 AARALARLCFAEMAKVTAIQHDGVDTLVELLRDPDAEIRAAALGALMGVTTVDEGKKAMVPAGXXXXXXXXXXXXXXXXXLNAVKTVANVAAFP 94
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: A0A4P9XBI4_9FUNG (Uncharacterized protein n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XBI4_9FUNG) HSP 1 Score: 62.8 bits (151), Expect = 2.120e-8 Identity = 48/158 (30.38%), Postives = 79/158 (50.00%), Query Frame = 1
Query: 49 KAVDEALDLQPLALKVLCNVIKN---EVGLERALAASLVETLIKLLGNDRPPEVQREACVTLTLACFDDMAKIIAIQN-NGVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSERSDVLLLNSLKLVASIAAHPGNNYQL 510
K + E L+ Q L L++L +++ + + AL +++ L L+ +D P V+ AC + F + +AI + + L LLS VRAAA GALM+IT GKR ++ +A + L + S+ +LLN LKL+ ++ QL
Sbjct: 199 KLLTERLENQVLLLEILEQCLRHGRPSLVIREALDHHVMDALAALIKDDAPSAVKAAACRGIMALAFVPEGRAVAIAHPRAIDHLIVLLSDHKSAVRAAAAGALMIITIDVEGKRAVVRANAVVRLIAMLDDSSEAVLLNVLKLMTNMTEDYRGRLQL 356
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: A0A7S2V2I4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2I4_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 7.060e-7 Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 277 GVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSERSDVLLLNSLKLVASIAAHP 492
GV L LLS A ++R+AA GALM+ITTV+ GK +L+T V L++ ++ LN LK+++SIAAHP
Sbjct: 2 GVGVLVHLLSDEAHQIRSAAAGALMLITTVEQGKDDMLATDGPAVIVDLLTDDQRLVKLNCLKVISSIAAHP 73
BLAST of mRNA_H-paniculata_contig28557.7778.1 vs. uniprot
Match: A0A024G614_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G614_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 7.220e-6 Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 1
Query: 49 KAVDEALDLQPLALKVLCNVIKNEVGLERALAASLVETLIKLLGN---DRPPEVQREACVTLTLACFDDMAKIIAIQNNGVTRLSALLSTAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSERSDVLLLNSLKLVASIAAHPGNNYQL 510
K++ +++ AL +L NV+ + GLE A L ++L VQ AC + + + AK +A++ V LS LL+ +V+ A +GALM + D K +I++ ++ + L D + LN+LKL+A +AAHP QL
Sbjct: 219 KSISNKSEIRIRALHLLRNVVND--GLESTSALMLDLEAMQLCSKYIRHANYHVQVAACNVIAAIGYIERAKGVAVEFGIVKELSLLLTDRNRKVQGACVGALMNLAINDEAKGIIIANNSLLVVPQLLECSEDSIKLNTLKLIAIVAAHPEARKQL 373
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 119.8 |
| Seed ortholog evalue | 1.3e-24 |
| Seed eggNOG ortholog | 44056.XP_009040277.1 |
| Preferred name | LATS1 |
| KEGG ko | ko:K04345,ko:K04739,ko:K08791,ko:K10409,ko:K11143,ko:K19477 |
| KEGG Pathway | ko01522,ko04010,ko04014,ko04020,ko04022,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04211,ko04213,ko04214,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04390,ko04391,ko04392,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04730,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04970,ko04971,ko04976,ko05012,ko05016,ko05020,ko05030,ko05031,ko05032,ko05110,ko05146,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05414,map01522,map04010,map04014,map04020,map04022,map04024,map04062,map04113,map04114,map04138,map04140,map04211,map04213,map04214,map04261,map04270,map04310,map04340,map04341,map04371,map04390,map04391,map04392,map04530,map04540,map04611,map04713,map04714,map04720,map04723,map04724,map04725,map04726,map04727,map04728,map04730,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04970,map04971,map04976,map05012,map05016,map05020,map05030,map05031,map05032,map05110,map05146,map05165,map05166,map05169,map05200,map05203,map05205,map05414 |
| KEGG Module | M00683,M00695 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000079,GO:0000082,GO:0000086,GO:0000166,GO:0000226,GO:0000278,GO:0000287,GO:0000819,GO:0000902,GO:0000904,GO:0000922,GO:0001221,GO:0001223,GO:0001224,GO:0001225,GO:0001578,GO:0001654,GO:0001667,GO:0001701,GO:0001708,GO:0001745,GO:0001751,GO:0001752,GO:0001754,GO:0001824,GO:0001825,GO:0001826,GO:0001827,GO:0001828,GO:0001932,GO:0001933,GO:0001934,GO:0002064,GO:0002065,GO:0002066,GO:0002119,GO:0002164,GO:0003006,GO:0003008,GO:0003341,GO:0003351,GO:0003674,GO:0003774,GO:0003824,GO:0004672,GO:0004674,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005858,GO:0005875,GO:0005886,GO:0005911,GO:0005912,GO:0005929,GO:0005930,GO:0005938,GO:0006464,GO:0006468,GO:0006469,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007059,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007368,GO:0007389,GO:0007399,GO:0007423,GO:0007444,GO:0007446,GO:0007460,GO:0007507,GO:0007568,GO:0007588,GO:0007600,GO:0007605,GO:0008064,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008285,GO:0008286,GO:0008340,GO:0008360,GO:0008361,GO:0008544,GO:0008630,GO:0009314,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009790,GO:0009791,GO:0009792,GO:0009799,GO:0009855,GO:0009886,GO:0009887,GO:0009888,GO:0009892,GO:0009893,GO:0009894,GO:0009913,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010212,GO:0010243,GO:0010259,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010631,GO:0010646,GO:0010648,GO:0010721,GO:0010769,GO:0010941,GO:0010942,GO:0010975,GO:0012501,GO:0014013,GO:0014014,GO:0015630,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016324,GO:0016462,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0018105,GO:0018193,GO:0018209,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030031,GO:0030054,GO:0030111,GO:0030154,GO:0030162,GO:0030178,GO:0030182,GO:0030216,GO:0030286,GO:0030317,GO:0030331,GO:0030421,GO:0030554,GO:0030707,GO:0030832,GO:0030833,GO:0030855,GO:0030879,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031344,GO:0031399,GO:0031400,GO:0031401,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032386,GO:0032387,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032838,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033135,GO:0033138,GO:0033143,GO:0033146,GO:0033157,GO:0033554,GO:0033673,GO:0034613,GO:0034622,GO:0035082,GO:0035239,GO:0035257,GO:0035258,GO:0035265,GO:0035295,GO:0035329,GO:0035556,GO:0035639,GO:0036094,GO:0036157,GO:0036158,GO:0036211,GO:0040007,GO:0040008,GO:0040011,GO:0042127,GO:0042176,GO:0042221,GO:0042306,GO:0042308,GO:0042325,GO:0042326,GO:0042327,GO:0042706,GO:0042771,GO:0042981,GO:0042995,GO:0043009,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043412,GO:0043434,GO:0043549,GO:0043588,GO:0043704,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044448,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0044843,GO:0045165,GO:0045176,GO:0045177,GO:0045179,GO:0045185,GO:0045464,GO:0045465,GO:0045503,GO:0045504,GO:0045570,GO:0045595,GO:0045596,GO:0045664,GO:0045736,GO:0045786,GO:0045793,GO:0045859,GO:0045926,GO:0045936,GO:0045937,GO:0046530,GO:0046552,GO:0046620,GO:0046621,GO:0046822,GO:0046823,GO:0046872,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048546,GO:0048565,GO:0048580,GO:0048581,GO:0048583,GO:0048585,GO:0048589,GO:0048592,GO:0048598,GO:0048609,GO:0048621,GO:0048638,GO:0048640,GO:0048646,GO:0048663,GO:0048665,GO:0048699,GO:0048731,GO:0048732,GO:0048749,GO:0048814,GO:0048856,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051049,GO:0051051,GO:0051093,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051220,GO:0051223,GO:0051224,GO:0051235,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051276,GO:0051338,GO:0051348,GO:0051427,GO:0051493,GO:0051641,GO:0051674,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0055123,GO:0060251,GO:0060253,GO:0060255,GO:0060271,GO:0060284,GO:0060341,GO:0060429,GO:0060465,GO:0060644,GO:0060828,GO:0061062,GO:0061064,GO:0061065,GO:0061067,GO:0061180,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070161,GO:0070201,GO:0070286,GO:0070727,GO:0070887,GO:0070925,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071900,GO:0071901,GO:0071944,GO:0072089,GO:0072331,GO:0072332,GO:0072359,GO:0080090,GO:0090066,GO:0090087,GO:0090090,GO:0090130,GO:0090132,GO:0090317,GO:0090596,GO:0097014,GO:0097159,GO:0097190,GO:0097193,GO:0097367,GO:0097722,GO:0098590,GO:0098813,GO:0099568,GO:0099738,GO:0110053,GO:0120025,GO:0120031,GO:0120035,GO:0120036,GO:0120038,GO:0140096,GO:1900180,GO:1900181,GO:1901265,GO:1901363,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1902903,GO:1903047,GO:1903050,GO:1903362,GO:1903827,GO:1903828,GO:1904029,GO:1904030,GO:1904589,GO:1904590,GO:1904950,GO:2000026,GO:2000058 |
| EggNOG free text desc. | inner cell mass cellular morphogenesis |
| EggNOG OGs | COG0664@1,KOG0608@1,KOG0608@2759,KOG0616@1,KOG0616@2759,KOG1113@2759,KOG1587@1,KOG1587@2759 |
| Ec32 ortholog description | Armadillo-like helical |
| Ec32 ortholog | Ec-20_002400.1 |
| EC | 2.7.11.1,2.7.11.11,2.7.11.12 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036,ko04812 |
| Exons | 4 |
| Model size | 522 |
| Cds size | 519 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig28557.7778.1 >prot_H-paniculata_contig28557.7778.1 ID=prot_H-paniculata_contig28557.7778.1|Name=mRNA_H-paniculata_contig28557.7778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MRALVQAGYPAKLVGKAVDEALDLQPLALKVLCNVIKNEVGLERALAASL
VETLIKLLGNDRPPEVQREACVTLTLACFDDMAKIIAIQNNGVTRLSALL
STAACEVRAAAMGALMMITTVDAGKRVILSTSATEEAVKALSERSDVLLL
NSLKLVASIAAHPGNNYQLGLM* back to topmRNA from alignment at H-paniculata_contig28557:259..3060+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig28557.7778.1 ID=mRNA_H-paniculata_contig28557.7778.1|Name=mRNA_H-paniculata_contig28557.7778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2802bp|location=Sequence derived from alignment at H-paniculata_contig28557:259..3060+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGATGCGAGCATTGGTGCAAGCCGGGTACCCGGCGAAGCTAGTAGGCAA
GGCGGTCGACGAGGCGCTGGACCTGCAACCATTGGCTCTCAAGGTACTCT
CTGATTGGCCCCCAATGAAATATCTGTGGTGGTGGTGGTGGTGGTGGTTT
GATTCTGGCAATTCGTGGTCTGGCTTAGATCGTCATTGGCCGTGTAGTTG
TTAGTTAGTCTGATATGTTCTGACTTTTCTCGTTCGGTAGTTAGCCGAGT
TGCGTCAATCCCATCTCTAATTGCGCCAGTTTTGTCTCTGCTGTAATAAA
TACTTGACAACATACTCGACCGAACGTCTCGGGATGACTTGTACTCATGT
AAGTAAGCACGTGTGGAATGCACGTTGAAAATACCTCTGGTGTTGAGACA
TCGCTGTCGTTATCGGCTGACGAAAATTGAGAACAAAAGGCAGTGTGTAC
AACGTTGGTGTAGAGGAAGGCTGCAGCAGGGATTTGTGCTCGGGTGTATT
GTGTGTCTGTGTGTTTGCATGTGTGCGTCTTTTCTCATATGAACATGTGT
GTGTGAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTC
ATATGGATGACGATTGCAACACACACAAACATGAATAAGGTCTTGTGCAA
CGTCATCAAGAATGAAGTGGGCCTCGAAAGGGCGTTGGCTGCGTCTCTGG
TGGAAACTTTGATCAAGCTTTTGGGGAATGACAGACCACCGGAGGTGCAG
CGGGAAGCTTGCGTTACGCTTACCCTCGCCTGTTTCGACGACATGGCCAA
GATCATTGCTATTCAGGTACGGGCTGGTTGTAGAAAAATATGTCAACTAT
TAGATATATCTCAGTCGTGGAGACACAAGAACCTTCTTTTTTTGCGTTCT
GTTTTTGTCCCCTGATGTGATCTGCAACGTGTATATATATATATATATAT
ATATAACACTAAAAGTAAAAACAATTCCACATCATTGCAAGCTAACTTCG
CAGTGTTACTTTTAGCCTCAAGATGCGTCGTATCCATTATTCAATCTCAC
CGACCTCACGCTTCACCTGGCTTGGCTATATATATCCTGTTAAGTTTTGT
GCCTCTTGTGAACGTGAAGGTTTGAACTCTCTTGTTGGAGTCTTTTCATC
ATATCAATACGTGTAGATTTGGGTTACTGTGTATTGTTGGGCTAAGTAAT
CTTCTGTGTAGACTATAAATACGAGAAAACGCGTTGCTCGTTCAGGTGCT
CTGCATGCAACGATGTACACTACCGGCCGGCTCGTACAAAAAACGTCCGA
AAGAAACGAAGCCTGAAATTATTTTTCATCTTTTAAGAAATTTAGAGCAA
GAAATTGAGCTCAATTTTTATCCCCACGGAGCTGCTACTCTCTCATCTCT
ACTTTAAGAAGCACAAGGTGCTTCCGTGATTCGGTGAAACCAAAAAGGAG
CCTGAACCGTAATTTCATTTTCTTACGAGCATGTGCAGACTCGGACACAT
GCATACACGTACATTTACTCGTATATGGCGTAGTGACAAGTCGTTGAACT
ACGGTGCTCGGAGCCTCAGCAACCAAACGTTCTCTTGGCTTCGGTTCGTC
TCTCTTGTCTTGAGAGGCGGGCTACTTTAGAAGGGGAATTATTCGAGCCG
ATTTTTTTCAAGTTTTGAGCCGCTTTGCGGGGCGGCTAGGCAATATATAT
GCCCCCCTCCCCCTTGAAAACTACGGCCAATCCAAATTGTGCGTTGTGCA
CCGTTGGGGGATGCGTAGACACATGATGCCGTTGTATAAGTGTTTTTGAC
CTAGTCTTTTCCTTTATCCGCTTTGTGGAGCGACGCTCGTTAAACATTCT
CACCCCTCCGAACCGTAGCCCTACTCTTCACTTGTCTTACCTCTCGGCGT
GTCCCATTGACCAGAACAACGGCGTGACGAGACTGTCTGCATTGCTGTCC
ACCGCTGCGTGCGAAGTTCGAGCCGCGGCGATGGGCGCATTAATGATGAT
CACCACAGTGGACGCTGGTAAGTTGACAGCCGCTATCTTCATATGTGTGA
TGAATATTAACACGGCATATCTACCTATACATGTATATATTACATATATA
GCATGGACAACACCCAGTCAAAACCTAAGGCGAATCAGAATTGCCAGTTA
ACCTTCAAGTATTGTCTATCTGGCCGGTATATCAACGATATATATATATA
TATATATATATATATATATTAAAATCGAAGCACAACACCATCCATCTAAC
GTCTTATTATATTTACAATTTCGATGTAAGATTTACATTGAAACGCTGCC
GCCATGCATTCACACGTGTTAGAGTAGACGAATGGCAAGACGACAATCAA
TGCAACGTGAGAAAATGCTGGAGCAGCAGGAGGTTTTGACGGGCGTGTCC
GTTTTTAGGCCTTTACGTCTTGTGCCCGTTGCATACATAAACAACCTACA
GGATTAGCGTGTGCGAAGTAGATGATGGTTGTGTTGTATGCCCCCTCCTC
CGTCCGCCGCCCTTCTCCAGGATATTTATCTTAGTAAAGAAACGCGTGCG
GTGCGTAGCAGCAGCAGTCCGTCGATGGTCGTGTGAACGAGGGACACAAT
ATAAAAAAAAGACAAATAGCGTTAGGGTTTTAATTCTTTATCTTGCCGAA
CAGGGAAGCGGGTGATTTTGTCGACCTCTGCGACGGAGGAGGCCGTGAAG
GCGCTCAGCGAGAGGAGTGATGTTCTGTTGCTCAACTCTCTCAAGCTCGT
CGCAAGCATTGCCGCTCACCCAGGTAATAATTATCAACTGGGGTTGATGT
GA back to topCoding sequence (CDS) from alignment at H-paniculata_contig28557:259..3060+ >mRNA_H-paniculata_contig28557.7778.1 ID=mRNA_H-paniculata_contig28557.7778.1|Name=mRNA_H-paniculata_contig28557.7778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig28557:259..3060+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGAGCATTGGTGCAAGCCGGGTACCCGGCGAAGCTAGTAGGCAAGGC
GGTCGACGAGGCGCTGGACCTGCAACCATTGGCTCTCAAGATGCGAGCAT
TGGTGCAAGCCGGGTACCCGGCGAAGCTAGTAGGCAAGGCGGTCGACGAG
GCGCTGGACCTGCAACCATTGGCTCTCAAGGTCTTGTGCAACGTCATCAA
GAATGAAGTGGGCCTCGAAAGGGCGTTGGCTGCGTCTCTGGTGGAAACTT
TGATCAAGCTTTTGGGGAATGACAGACCACCGGAGGTGCAGCGGGAAGCT
TGCGTTACGCTTACCCTCGCCTGTTTCGACGACATGGCCAAGATCATTGC
TATTCAGGTCTTGTGCAACGTCATCAAGAATGAAGTGGGCCTCGAAAGGG
CGTTGGCTGCGTCTCTGGTGGAAACTTTGATCAAGCTTTTGGGGAATGAC
AGACCACCGGAGGTGCAGCGGGAAGCTTGCGTTACGCTTACCCTCGCCTG
TTTCGACGACATGGCCAAGATCATTGCTATTCAGAACAACGGCGTGACGA
GACTGTCTGCATTGCTGTCCACCGCTGCGTGCGAAGTTCGAGCCGCGGCG
ATGGGCGCATTAATGATGATCACCACAGTGGACGCTGAACAACGGCGTGA
CGAGACTGTCTGCATTGCTGTCCACCGCTGCGTGCGAAGTTCGAGCCGCG
GCGATGGGCGCATTAATGATGATCACCACAGTGGACGCTGGGAAGCGGGT
GATTTTGTCGACCTCTGCGACGGAGGAGGCCGTGAAGGCGCTCAGCGAGA
GGAGTGATGTTCTGTTGCTCAACTCTCTCAAGCTCGTCGCAAGCATTGCC
GCTCACCCAGGTAATAATTATCAACTGGGGTTGATGTGAGGAAGCGGGTG
ATTTTGTCGACCTCTGCGACGGAGGAGGCCGTGAAGGCGCTCAGCGAGAG
GAGTGATGTTCTGTTGCTCAACTCTCTCAAGCTCGTCGCAAGCATTGCCG
CTCACCCAGGTAATAATTATCAACTGGGGTTGATGTGA back to top
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