mRNA_H-paniculata_contig28533.7773.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Match: D7FNL8_ECTSI (Homoserine dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL8_ECTSI) HSP 1 Score: 302 bits (774), Expect = 1.090e-98 Identity = 152/168 (90.48%), Postives = 159/168 (94.64%), Query Frame = 1
Query: 1 VVTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAAHLDDIQNLLKEHPGVTFGYEAAVCGGIPIIATLQNDYPGDKILKVCGIMNGTTNFMLSKMESEGADYGDVLKEAQDLGFAEADPTADVEGLDVQAKIALLTKLAFGATVSSDSVRLK 504
VVTDYA ILDDDSINCVVELMGGVT AKDVVFEAIRRNKHV+TANKALVAA+L +IQ LLKEHPGVTFGYEAAVCGGIPIIATLQNDY GDKILKVCGIMNGTTNFMLSKMESEGADYG+VLKEAQDLG+AEADPTADVEG DVQAKIALLTKLAFGATV SD ++ K
Sbjct: 130 VVTDYAAILDDDSINCVVELMGGVTDAKDVVFEAIRRNKHVVTANKALVAAYLGEIQELLKEHPGVTFGYEAAVCGGIPIIATLQNDYLGDKILKVCGIMNGTTNFMLSKMESEGADYGEVLKEAQDLGYAEADPTADVEGFDVQAKIALLTKLAFGATVPSDLIQCK 297
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Match: A0A835ZAD6_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD6_9STRA) HSP 1 Score: 266 bits (680), Expect = 2.600e-85 Identity = 134/165 (81.21%), Postives = 147/165 (89.09%), Query Frame = 1
Query: 1 VVTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAAHLDDIQNLLKEHPGVTFGYEAAVCGGIPIIATLQNDYPGDKILKVCGIMNGTTNFMLSKMESEGADYGDVLKEAQDLGFAEADPTADVEGLDVQAKIALLTKLAFGATVSSDSV 495
VV+DY IL+DDSINCVVELMGGVT+AKDVVFEAI+R KHV+TANKAL+A +L +IQ LLK+HP V F YEAAVCGGIPII LQND+ GDKI K+CGIMNGTTNFMLSKMESEGADY DVLKEAQ LG+AEADPTADVEGLDVQAKIALL KLAFGATV D+V
Sbjct: 66 VVSDYKAILEDDSINCVVELMGGVTNAKDVVFEAIKRGKHVVTANKALLAQYLPEIQELLKQHPEVHFAYEAAVCGGIPIINVLQNDFFGDKISKICGIMNGTTNFMLSKMESEGADYDDVLKEAQALGYAEADPTADVEGLDVQAKIALLAKLAFGATVPVDTV 230
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Match: A0A835YR06_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR06_9STRA) HSP 1 Score: 243 bits (621), Expect = 6.000e-77 Identity = 127/166 (76.51%), Postives = 136/166 (81.93%), Query Frame = 1
Query: 4 VTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAAHLDDIQNLLKEHPGVTFGYEAAVCGGIPIIATLQNDYPGDKILKVCGIMNGTTNFMLSKMESEGADYGDVLKEAQDLGFAEADPTADVEGLDVQAKIALLTK--LAFGATVSSDSV 495
VTDY IL DDSINC++ELMGGVTHAKDVVFEA++R KHVITANKAL+AA+L +I+ LL P GYEAAVCGGIPIIA LQ DY GD I KV GIMNGTTNFML+KME EGADY VLKEAQDLGFAEADPTADVEG DVQAKIALL K LAFG TV SV
Sbjct: 63 VTDYDAILKDDSINCIIELMGGVTHAKDVVFEALKRGKHVITANKALLAAYLPEIEALLAAAPQARLGYEAAVCGGIPIIAALQQDYVGDSITKVVGIMNGTTNFMLTKMEQEGADYAAVLKEAQDLGFAEADPTADVEGHDVQAKIALLAKANLAFGQTVPLSSV 228
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Match: D8LHG9_ECTSI (Homoserine dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG9_ECTSI) HSP 1 Score: 241 bits (615), Expect = 1.830e-75 Identity = 120/164 (73.17%), Postives = 138/164 (84.15%), Query Frame = 1
Query: 4 VTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAAHLDDIQNLLKEHPGVTFGYEAAVCGGIPIIATLQNDYPGDKILKVCGIMNGTTNFMLSKMESEGADYGDVLKEAQDLGFAEADPTADVEGLDVQAKIALLTKLAFGATVSSDSV 495
VTDY +IL+DDSINCVVELMGGVTHAKDVVF+A+++ KHV+TANKAL+A L ++++L+ E+ G T GYEAAVCGGIPII +Q Y GD I V GIMNGTTNFML+KME+EGADY VLKEAQDLGFAEADPTADVEG DVQAKIALL KLAFG V+ D V
Sbjct: 63 VTDYDEILEDDSINCVVELMGGVTHAKDVVFKALKKGKHVVTANKALLAQLLPEVKSLVAENAGTTLGYEAAVCGGIPIIHNMQGSYVGDSIQSVMGIMNGTTNFMLTKMETEGADYAAVLKEAQDLGFAEADPTADVEGHDVQAKIALLAKLAFGQDVALDKV 226
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Match: A0A6A4YYC0_9STRA (Homoserine dehydrogenase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YYC0_9STRA) HSP 1 Score: 233 bits (594), Expect = 8.750e-75 Identity = 113/165 (68.48%), Postives = 135/165 (81.82%), Query Frame = 1
Query: 1 VVTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAAHLDDIQNLLKEHPGVTFGYEAAVCGGIPIIATLQNDYPGDKILKVCGIMNGTTNFMLSKMESEGADYGDVLKEAQDLGFAEADPTADVEGLDVQAKIALLTKLAFGATVSSDSV 495
+ T Y ILDD SINC+VELMGGVT AKDVVF+AI++NKHVITANKALVA H+ ++ LL+ HP V FGYEA+VCGGIPII TLQ+ Y GD I ++ GIMNGTTN+MLSKME+EGA Y VLKEAQDLG+AEA+P+ADV+G DVQAKIA+L KL FG + S+
Sbjct: 64 ITTKYDDILDDSSINCIVELMGGVTDAKDVVFKAIQKNKHVITANKALVANHMTELNELLQAHPTVRFGYEASVCGGIPIIHTLQSSYSGDVIKEIAGIMNGTTNYMLSKMETEGASYEAVLKEAQDLGYAEANPSADVDGFDVQAKIAILAKLGFGCVIPPSSI 228
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Match: A0A7S4D8P3_HETAK (Homoserine dehydrogenase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8P3_HETAK) HSP 1 Score: 234 bits (596), Expect = 8.560e-74 Identity = 117/165 (70.91%), Postives = 134/165 (81.21%), Query Frame = 1
Query: 1 VVTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAAHLDDIQNLLKEHPGVTFGYEAAVCGGIPIIATLQNDYPGDKILKVCGIMNGTTNFMLSKMESEGADYGDVLKEAQDLGFAEADPTADVEGLDVQAKIALLTKLAFGATVSSDSV 495
+VTD+ ILDD INCV+E+MGG T AKDVV+ AI + KHV+TANKAL+A HL +IQ LL ++PGV FG+EAAVCGGIPII TLQND+ GD I K+ GIMNGTTN+ML+KMESEGADY VL EAQ LG+AEADPTADVEG DVQAKIAL KLAFG V D V
Sbjct: 136 IVTDFNAILDDPEINCVIEVMGGTTAAKDVVYAAIGKGKHVVTANKALLAQHLPEIQELLAQNPGVKFGFEAAVCGGIPIIHTLQNDFLGDNIRKLLGIMNGTTNYMLTKMESEGADYAAVLAEAQALGYAEADPTADVEGHDVQAKIALAAKLAFGVNVPVDQV 300
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Match: A0A3R7Z5R8_9STRA (Homoserine dehydrogenase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A3R7Z5R8_9STRA) HSP 1 Score: 231 bits (589), Expect = 2.230e-71 Identity = 112/165 (67.88%), Postives = 134/165 (81.21%), Query Frame = 1
Query: 1 VVTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAAHLDDIQNLLKEHPGVTFGYEAAVCGGIPIIATLQNDYPGDKILKVCGIMNGTTNFMLSKMESEGADYGDVLKEAQDLGFAEADPTADVEGLDVQAKIALLTKLAFGATVSSDSV 495
+ T Y ILDD SINC+VELMGGVT AKDVVF+AI++NKHVITANKALVA H+ ++ LL+ HP V FGYEA+VCGGIPII TLQ+ Y GD I ++ GIMNGTTN+MLSKME+EG Y VLKEAQDLG+AEA+P+ADV+G DVQAKIA+L KL FG + S+
Sbjct: 84 ITTKYDDILDDSSINCIVELMGGVTDAKDVVFKAIQKNKHVITANKALVANHMTELNELLQAHPTVRFGYEASVCGGIPIIHTLQSSYSGDVIKEIAGIMNGTTNYMLSKMETEGESYEAVLKEAQDLGYAEANPSADVDGFDVQAKIAILAKLGFGCVIPPSSI 248
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Match: A0A6V1RNX4_HETAK (Homoserine dehydrogenase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RNX4_HETAK) HSP 1 Score: 232 bits (591), Expect = 3.810e-71 Identity = 117/168 (69.64%), Postives = 135/168 (80.36%), Query Frame = 1
Query: 1 VVTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAAHLDDIQNLLKEHPGVTFGYEAAVCGGIPIIATLQNDYPGDKILKVCGIMNGTTNFMLSKMESEGADYGDVLKEAQDLGFAEADPTADVEGLDVQAKIALLTKLAFGATVSSDSVRLK 504
+ TD+ ILDDD INCVVE+MGG T AKDVV+ AI + KHV+TANKAL+A +L ++Q LK P + FGYEAAVCGGIPII TLQNDY GDKI K+ GIMNGTTNFML+KMESEGADY VL EAQ LG+AEADPTADVEG DVQAKIAL+ KLAFG V +++ K
Sbjct: 137 ITTDFNAILDDDEINCVVEVMGGTTAAKDVVYAAIEKGKHVVTANKALLAQYLPELQARLKARPLLKFGYEAAVCGGIPIIHTLQNDYLGDKIRKILGIMNGTTNFMLTKMESEGADYAAVLAEAQALGYAEADPTADVEGHDVQAKIALVAKLAFGVGVPVEAIPCK 304
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Match: A0A6G0WX43_9STRA (Homoserine dehydrogenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WX43_9STRA) HSP 1 Score: 229 bits (584), Expect = 7.270e-71 Identity = 111/165 (67.27%), Postives = 134/165 (81.21%), Query Frame = 1
Query: 1 VVTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAAHLDDIQNLLKEHPGVTFGYEAAVCGGIPIIATLQNDYPGDKILKVCGIMNGTTNFMLSKMESEGADYGDVLKEAQDLGFAEADPTADVEGLDVQAKIALLTKLAFGATVSSDSV 495
+ T Y IL+D+SINC++ELMGGVT AKDVVF+AI +NKHVITANKALVA+ + ++ +LL+ HP V FGYEA+VCGGIPII TLQ+ Y GD I +V GIMNGTTN+MLSKME EGA Y VLKEAQDLGFAEA+P+ADV+G DVQAKIA+L KL FG + +
Sbjct: 63 ITTKYDDILEDNSINCIIELMGGVTDAKDVVFKAIAKNKHVITANKALVASFMPELTDLLQAHPSVRFGYEASVCGGIPIIHTLQSSYSGDVIKEVAGIMNGTTNYMLSKMEKEGASYEAVLKEAQDLGFAEANPSADVDGFDVQAKIAILAKLGFGCVIKPSDI 227
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Match: A0A1V9ZXW6_9STRA (Homoserine dehydrogenase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXW6_9STRA) HSP 1 Score: 229 bits (584), Expect = 7.460e-71 Identity = 114/165 (69.09%), Postives = 133/165 (80.61%), Query Frame = 1
Query: 1 VVTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAAHLDDIQNLLKEHPGVTFGYEAAVCGGIPIIATLQNDYPGDKILKVCGIMNGTTNFMLSKMESEGADYGDVLKEAQDLGFAEADPTADVEGLDVQAKIALLTKLAFGATVSSDSV 495
+ + Y ILDD SINCVVELMGGVT AKDVVF+AI +NKHVITANKAL+A + D+ +LL+ HP V FGYEA+VCGGIPII TLQ+ Y GD I ++ GIMNGTTN+MLSKME EGA Y VLKEAQDLGFAEA+P+ADV+G DVQAKIA+L KL FG V +V
Sbjct: 63 ITSKYDDILDDPSINCVVELMGGVTDAKDVVFKAIAKNKHVITANKALIANFMPDLTSLLEAHPNVRFGYEASVCGGIPIIHTLQSSYTGDGIKEIAGIMNGTTNYMLSKMEKEGASYDAVLKEAQDLGFAEANPSADVDGFDVQAKIAILAKLGFGCHVPPSTV 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28533.7773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig28533.7773.1 >prot_H-paniculata_contig28533.7773.1 ID=prot_H-paniculata_contig28533.7773.1|Name=mRNA_H-paniculata_contig28533.7773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp VVTDYAKILDDDSINCVVELMGGVTHAKDVVFEAIRRNKHVITANKALVAback to top mRNA from alignment at H-paniculata_contig28533:243..2558- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig28533.7773.1 ID=mRNA_H-paniculata_contig28533.7773.1|Name=mRNA_H-paniculata_contig28533.7773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2316bp|location=Sequence derived from alignment at H-paniculata_contig28533:243..2558- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig28533:243..2558- >mRNA_H-paniculata_contig28533.7773.1 ID=mRNA_H-paniculata_contig28533.7773.1|Name=mRNA_H-paniculata_contig28533.7773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig28533:243..2558- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |