mRNA_H-paniculata_contig28480.7766.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Match: A0A6H5KDX4_9PHAE (Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX4_9PHAE) HSP 1 Score: 289 bits (740), Expect = 3.750e-90 Identity = 193/341 (56.60%), Postives = 215/341 (63.05%), Query Frame = 1
Query: 4 SIVRYVEIYNNVFHNLLEGVDRARDDDSATSKNKQVGPSPHICVFDTPFRTIAPCKLASLQVAPPVTPPPPSKIEVREHPSRGVFLSGGKGLRVPVSSAAAVAALVSTGAKARATAATSLNDRSSRSHAILILEIEATQQSPET-------------GDGSGGARHARVETSDGG-----------GIPKASRRRRG---------SIVDCVSIGKMQVIDLAGSERVLLSGVEGTALVEAQNINLSLTLLGDVLSALSRYHRAVGRSAVAGTPPGAGVVGYAGGVARVAGAGPDKPFIPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSLR 927
+ RYVEIYNNVFHNLLEGV TS N++ G S H + +KIEVREHPSRGVFLSGGKGLRVPVSSA AVA LV+ G K+R TA+T LNDRSSRSHAI+ILEIEAT P GD GG + G G+ K RRG SIV+CVSIGKMQ+IDLAGSERV +S VEG++LVEAQNINLSLTLLGDVL++LS+YHRA RS+ AG GAG A R G +KPF+PYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSLR
Sbjct: 36 DVTRYVEIYNNVFHNLLEGVA------DGTSGNRR-GKSSHN--GGARLSAGSXXXXXXXXXXXXXXXXXSTKIEVREHPSRGVFLSGGKGLRVPVSSADAVAGLVARGTKSRRTASTGLNDRSSRSHAIMILEIEATHSPPSAXXXXXXXXXXRARGDAVGGPSSSAPSGGLGSSNPVAGGVGSLGVAKVGAGRRGXXXXXXXXXSIVECVSIGKMQLIDLAGSERVSMSEVEGSSLVEAQNINLSLTLLGDVLNSLSKYHRASARSSSAGGMEGAGSSSGAPPAGRGRAVG-EKPFVPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSLR 366
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Match: D8LT23_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT23_ECTSI) HSP 1 Score: 272 bits (695), Expect = 2.110e-78 Identity = 188/338 (55.62%), Postives = 205/338 (60.65%), Query Frame = 1
Query: 13 RYVEIYNNVFHNLLEGVDRARDDDSATSKNKQVGPSPHICVFDTPFRTIAPCKLASLQVAPPVTPPPPSKIEVREHPSRGVFLSGGKGLRVPVSSAAAVAALVSTGAKARATAATSLNDRSSRSHAILILEIEATQQSPET-------------GDGSGGARHARVETSDGGGIPKAS-------------RR-------RRGSIVDCVSIGKMQVIDLAGSERVLLSGVEGTALVEAQNINLSLTLLGDVLSALSRYHRAVGRSAVAGTPPGAGVVGYAGGVARVAGAGPDKPFIPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSLR 927
RYVEIYNNVFHNLLEGV TS N++ G S H +KIEVREHPSRGVFLSGGKGLRVPVSSA AVAALV+ G K+R TA+T LNDRSSRSHAILILEIEAT P GD GG + G P A RR RR SIV+CVSIGKMQ+IDLAGSERV +S VEG++LVEAQNINLSLTLLGDVL++LS+YHRA RS G +KPF+PYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPA FQQTMMSLR
Sbjct: 7 RYVEIYNNVFHNLLEGVA------DGTSGNRR-GKSSHN--GGARLSADGXXXXXXXXXXXXXXXXXSTKIEVREHPSRGVFLSGGKGLRVPVSSANAVAALVARGTKSRRTASTGLNDRSSRSHAILILEIEATHSPPSAXXXXXXXXXXRARGDAVGGPSSSVPSGGLGSSNPAAGGVGPLGVARVGAGRRGXXXXXXRRRSIVECVSIGKMQLIDLAGSERVSMSEVEGSSLVEAQNINLSLTLLGDVLNSLSKYHRASARSXXXXXXXXXXXXXXXXXXXXXRAVG-EKPFVPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPACFQQTMMSLR 334
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Match: A0A835Z8L1_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L1_9STRA) HSP 1 Score: 179 bits (454), Expect = 8.040e-50 Identity = 116/258 (44.96%), Postives = 144/258 (55.81%), Query Frame = 1
Query: 112 GPSPHICVFDTPFRTIAPCKLASLQVAPPVTPPPPSKIEVREHPSRGVFLSGGKGLRVPVSSAAAVAALVSTGAKARATAATSLNDRSSRSHAILILEIEATQQSPETGDGSGGARHARVETSDGGGIPKASRRRRGSIVDCVSIGKMQVIDLAGSERVLLSGVEGTALVEAQNINLSLTLLGDVLSALSRYHRAVGRSAVAGTPPGAGVVGYAGGVARVAGAGPDKPFIPYRNSKLTYLLKDSLGGNCKTLMVCAVR 885
GP I + F I SL AP T KIE+RE P+RGV+L+GG LR+PV+ L+ G + RAT+ T++N+RSSRSHAIL E+E + S V +GK+Q+IDLAGSERV LSG EG+ L EAQ+INLSL+LLGDVLSALS+YHRAV + + T ++PFIPYRNSKLT+LLKDSLGGNCKTLMVC +R
Sbjct: 143 GPQQTIFMVTISFVEIYNNTFVSLLSAPSATTDGNQKIEIRESPTRGVYLTGGTNLRLPVTCTEEAMQLIHRGMEKRATSCTNMNERSSRSHAILTFEVERSTAS-------------------------------------VRVGKLQLIDLAGSERVGLSGAEGSVLAEAQSINLSLSLLGDVLSALSKYHRAVSKGLASAT---------------------ERPFIPYRNSKLTHLLKDSLGGNCKTLMVCCIR 342
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Match: A0A7S4E6T1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6T1_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.440e-36 Identity = 102/236 (43.22%), Postives = 134/236 (56.78%), Query Frame = 1
Query: 217 SKIEVREHPSRGVFLSGGKGLRVPVSSAAAVAALVSTGAKARATAATSLNDRSSRSHAILILEIEATQQSPETGDGSGGARHARVETSDGGGIPKASRRRRGSIVDCVSIGKMQVIDLAGSERVLLSGVEGTALVEAQNINLSLTLLGDVLSALSRYHRAVGRSAVAGTPPGAGVVGYAGGVARVAGAGPDKPFIPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSL 924
+KIE+RE GVFL+G L+V V+S V L+S G KARA A T ND SSRSH IL L +++ + S D A + V +GK+ ++DLAGSERV LSG +G LVEAQNINLSL LLGDVL+ALSR + G G + +G + +PYRNSKLTYLLKDSLGGN KTLM+ +R++ +++Q+++SL
Sbjct: 191 TKIEIRESRDTGVFLTGPSNLKVAVTSEQEVQELISLGDKARAYALTRCNDHSSRSHCILTLHVQSQRASIALQDPQNAA------------------------LTSVHVGKLNLVDLAGSERVSLSGAQGETLVEAQNINLSLALLGDVLAALSRNS----------------LRGEQG--TQFPRSGGSREPVPYRNSKLTYLLKDSLGGNSKTLMITTLRSSETYYRQSLVSL 384
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Match: F0YE27_AURAN (Kinesin-like protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE27_AURAN) HSP 1 Score: 140 bits (354), Expect = 1.880e-35 Identity = 116/305 (38.03%), Postives = 147/305 (48.20%), Query Frame = 1
Query: 10 VRYVEIYNNVFHNLLEGVDRARDDDSATSKNKQVGPSPHICVFDTPFRTIAPCKLASLQVAPPVTPPPPSKIEVREHPSRGVFLSGGKGLRVPVSSAAAVAALVSTGAKARATAATSLNDRSSRSHAILILEIEATQQSPETGDGSGGARHARVETSDGGGIPKASRRRRGSIVDCVSIGKMQVIDLAGSERVLLSGVEGTALVEAQNINLSLTLLGDVLSALSRYHRAVGRSAVAGTPPGAGVVGYAGGVARVAGAGPDKPFIPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSL 924
V YVE+YNNVF NLLE DR D A S+ K IE+RE G+FL G L+VPV S V LV+ G + R A+T+ N+ SSRSH +L L +E SR + C +GK+ ++DLAGSERV +SG EG LVEAQNINLSL LLGDVL+ALSR T P + P +P +PYRNSKLT+LLKDSLGGN KTLM+ +RA +++Q+++SL
Sbjct: 90 VSYVELYNNVFRNLLE--DRH---DHAPSQGK---------------------------------------IEIRESRDSGIFLGGPPNLKVPVKSERDVRDLVAFGDRQRQYASTNCNEHSSRSHCVLTLHVE-------------------------------SRWTESNRHSC-RLGKLNLVDLAGSERVAVSGAEGETLVEAQNINLSLALLGDVLAALSRN----------ATRP------------KSQSPRPPEP-VPYRNSKLTHLLKDSLGGNSKTLMITNLRAHRDYYRQSLVSL 295
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Match: A0A2R5G630_9STRA (Kinesin-like protein KIF3A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G630_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.360e-34 Identity = 112/303 (36.96%), Postives = 143/303 (47.19%), Query Frame = 1
Query: 16 YVEIYNNVFHNLLEGVDRARDDDSATSKNKQVGPSPHICVFDTPFRTIAPCKLASLQVAPPVTPPPPSKIEVREHPSRGVFLSGGKGLRVPVSSAAAVAALVSTGAKARATAATSLNDRSSRSHAILILEIEATQQSPETGDGSGGARHARVETSDGGGIPKASRRRRGSIVDCVSIGKMQVIDLAGSERVLLSGVEGTALVEAQNINLSLTLLGDVLSALSRYHRAVGRSAVAGTPPGAGVVGYAGGVARVAGAGPDKPFIPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSL 924
YVE+YNN F +LL A+ D+++S + T R IE+ S VFLSG L PV+SA L+ G++ RA AT N+ SSRSHAIL +E+ IP A+ +GK+ ++DLAGSER+ LS EG L E QNINLSL+ LGDVLSALSR H + G G R A A D+ +PYRNSKLT+LLKDSLGGN KTLM+ +R + QQT+M+L
Sbjct: 170 YVELYNNQFKDLLYS--HAQHGDASSSASTAXXXXXXXXXXSTSHR-----------------------IELHTTKSGSVFLSGTPSLHTPVTSAQEALRLIQLGSRNRAVGATDCNEHSSRSHAILTFYVESR-------------------------IPSAN-----GATSVAKLGKLHLVDLAGSERLTLSKAEGQTLTETQNINLSLSTLGDVLSALSRLHSS----------------GSKAGSRRAATAA-DRACVPYRNSKLTFLLKDSLGGNSKTLMIATIRTPDLYQQQTLMTL 400
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Match: A0A5A8D404_CAFRO (Kinesin motor domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D404_CAFRO) HSP 1 Score: 132 bits (333), Expect = 2.470e-30 Identity = 111/308 (36.04%), Postives = 156/308 (50.65%), Query Frame = 1
Query: 16 YVEIYNNVFHNLLEGVDRARDDDSATSKNKQVGPSPHICVFDTPFRTIAPCKLASL--QVAPPVTPPPPSKIEVREHPSRGVFLSGGKGLRVPVSSAAAVAALVSTGAKARATAATSLNDRSSRSHAILILEIEATQQSPETGDGSGGARHARVETSDGGGIPKASRRRRGSIVDCVSIGKMQVIDLAGSERVLLSGV--EGTALVEAQNINLSLTLLGDVLSALSRYHRAVGRSAVAGTPPGAGVVGYAGGVARVAGAGPDKPFIPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSLR 927
YVE+YNN F +LL A D A + + + + + D + A + +A +P P KI +RE SRGVFL G LRVPVSS LV+ G + RA AT LN SSRSHAI+I+++E+ + D + G + RRRR V +G++ V+DLAGSER+ +SG + L E Q+INLSLT+L DVLS L+ GT P +PYRNSKLT+LL+DSLGG+ +T+M+ VR ++QT+++L+
Sbjct: 217 YVELYNNNFRDLLHKSAAAGDAVRAETTARSLADAFNGADADEATSSSASAAASGQPQNMADRDSPSGP-KISIRESRSRGVFLEGSPTLRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESIAKDSADEDAXXXXXXXXXXVTASG---RPRRRRRAP----VRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTLAEAK---------GTAP---------------------VMVPYRNSKLTFLLRDSLGGSARTVMLVHVRPTSPHYRQTLVTLQ 486
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Match: A0A5A8DZ16_CAFRO (Kinesin motor domain-containing protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8DZ16_CAFRO) HSP 1 Score: 132 bits (333), Expect = 2.630e-30 Identity = 111/308 (36.04%), Postives = 156/308 (50.65%), Query Frame = 1
Query: 16 YVEIYNNVFHNLLEGVDRARDDDSATSKNKQVGPSPHICVFDTPFRTIAPCKLASL--QVAPPVTPPPPSKIEVREHPSRGVFLSGGKGLRVPVSSAAAVAALVSTGAKARATAATSLNDRSSRSHAILILEIEATQQSPETGDGSGGARHARVETSDGGGIPKASRRRRGSIVDCVSIGKMQVIDLAGSERVLLSGV--EGTALVEAQNINLSLTLLGDVLSALSRYHRAVGRSAVAGTPPGAGVVGYAGGVARVAGAGPDKPFIPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSLR 927
YVE+YNN F +LL A D A + + + + + D + A + +A +P P KI +RE SRGVFL G LRVPVSS LV+ G + RA AT LN SSRSHAI+I+++E+ + D + G + RRRR V +G++ V+DLAGSER+ +SG + L E Q+INLSLT+L DVLS L+ GT P +PYRNSKLT+LL+DSLGG+ +T+M+ VR ++QT+++L+
Sbjct: 217 YVELYNNNFRDLLHKSAAAGDAVRAETTARSLADAFNGADADEATSSSASAAASGQPQNMADRDSPSGP-KISIRESRSRGVFLEGSPTLRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESIAKDSADEDAXXXXXXXXXXVTASG---RPRRRRRAP----VRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTLAEAK---------GTAP---------------------VMVPYRNSKLTFLLRDSLGGSARTVMLVHVRPTSPHYRQTLVTLQ 486
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Match: A0A5A8CVH4_CAFRO (Kinesin motor domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CVH4_CAFRO) HSP 1 Score: 132 bits (333), Expect = 2.900e-30 Identity = 115/310 (37.10%), Postives = 160/310 (51.61%), Query Frame = 1
Query: 16 YVEIYNNVFHNLLEGVDRARDDDSATSKNKQVGPSPHICVFDTPFRTIAPCKLASL--QVAPPVTPPPPSKIEVREHPSRGVFLSGGKGLRVPVSSAAAVAALVSTGAKARATAATSLNDRSSRSHAILILEIE--ATQQSPETGDGSGGARHARVETSDGGGIPKASRRRRGSIVDCVSIGKMQVIDLAGSERVLLSGV--EGTALVEAQNINLSLTLLGDVLSALSRYHRAVGRSAVAGTPPGAGVVGYAGGVARVAGAGPDKPFIPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSLR 927
YVE+YNN F +LL A D A + + + + + + + A + +A +P P KI +RE SRGVFL G LRVPVSS LV+ G + RA AT LN SSRSHAI+I+++E A + E + A V S G P+ RRRR V +G++ V+DLAGSER+ +SG + L E Q+INLSLT+L DVLS L+ GT P +PYRNSKLT+LL+DSLGG+ +T+M+ VR ++QT+++L+
Sbjct: 1480 YVELYNNNFRDLLHKSAAAGDAVRAETTARSLADAFNGADAEEATSSSASAAASGQPQNMADRDSPSGP-KISIRESRSRGVFLEGSPTLRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESIAKDSADEDAVAAAAATPGAVTAS---GRPR--RRRRAP----VRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTLAEAK---------GTAP---------------------VMVPYRNSKLTFLLRDSLGGSARTVMLVHVRPTSPHYRQTLVTLQ 1749
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Match: A0A7S0UXL5_9CHLO (Kinesin-like protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UXL5_9CHLO) HSP 1 Score: 115 bits (289), Expect = 5.810e-25 Identity = 85/241 (35.27%), Postives = 123/241 (51.04%), Query Frame = 1
Query: 208 PPPSKIEVREHPSRGVFLSGGKGLRVPVSSAAAVAALVSTGAKARATAATSLNDRSSRSHAILILEIE-ATQQSPETGDGSGGARHARVETSDGGGIPKASRRRRGSIVDCVSIGKMQVIDLAGSERVLLSGVEGTALVEAQNINLSLTLLGDVLSALSRYHRAVGRSAVAGTPPGAGVVGYAGGVARVAGAGPDKPFIPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSLR 927
P S + +RE RGVF+ G V S V L+ G R T AT LN+ SSRSHA+ I+ +E T S GDGS +R ++S GG S + + +GK+ ++DLAGSERV ++G G L E++ IN SL+ LG+V+SAL+ ++ +PYR+SKLT +L+DSLGGNC+T M+C + FQ+T+ +L+
Sbjct: 196 PERSNLAIREDKRRGVFVEGLS--EWVVRSPGEVYQLMQQGQTMRTTGATKLNEVSSRSHAVCIIIVEKCTTASNFPGDGSDPSRMFGRDSSSMGGGSSGS-----TATQSIKVGKLNLVDLAGSERVAVTGAVGKRLEESKRINASLSALGNVISALTDRRS-------------------------------ERGHVPYRDSKLTRILEDSLGGNCRTTMICTAAPSMESFQETLSTLK 398 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28480.7766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig28480.7766.1 >prot_H-paniculata_contig28480.7766.1 ID=prot_H-paniculata_contig28480.7766.1|Name=mRNA_H-paniculata_contig28480.7766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=357bp MSIVRYVEIYNNVFHNLLEGVDRARDDDSATSKNKQVGPSPHICVFDTPFback to top mRNA from alignment at H-paniculata_contig28480:637..2632- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig28480.7766.1 ID=mRNA_H-paniculata_contig28480.7766.1|Name=mRNA_H-paniculata_contig28480.7766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1996bp|location=Sequence derived from alignment at H-paniculata_contig28480:637..2632- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig28480:637..2632- >mRNA_H-paniculata_contig28480.7766.1 ID=mRNA_H-paniculata_contig28480.7766.1|Name=mRNA_H-paniculata_contig28480.7766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2142bp|location=Sequence derived from alignment at H-paniculata_contig28480:637..2632- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |