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Homology
BLAST of mRNA_H-paniculata_contig2848.7765.1 vs. uniprot
Match: D7FX78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX78_ECTSI) HSP 1 Score: 205 bits (522), Expect = 2.660e-60 Identity = 99/144 (68.75%), Postives = 116/144 (80.56%), Query Frame = 3
Query: 153 MALVRLVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQDTPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVGLKAIYEIALIRKKEIEVYRTPLEGVCRSVAATALSMGLEIVDDR 584
M+ VR VRMRV AG+AKPGPAIGQALGPLGINMMEFCKKFNE+TKHIVQ+TP+P L+A+ DRSFT+++ P T + LKRCAG+EK GHE CG+VGLKA+YEIA ++ E PLE VC+SV ATALSMGLEIVDDR
Sbjct: 1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGVEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDR 144
BLAST of mRNA_H-paniculata_contig2848.7765.1 vs. uniprot
Match: A0A835Z8X1_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X1_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.980e-51 Identity = 91/158 (57.59%), Postives = 117/158 (74.05%), Query Frame = 3
Query: 153 MALVRLVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQDTPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVGLKAIYEIALIRKKEIEVYRTPLEGVCRSVAATALSMGLEIVDDRRKPDATDRDNERIG 626
M+LVR VRMRV AG AKPGPAIGQALGPLGINMM+FCK FN T+H++ DTP P+ LSAF++R+F + ++ P T + LKRCA I+K +K PG EI G VG KAIYEIA I+ ++ + PL+G+ RSVA+TALSMGL+I DD + D ++ G
Sbjct: 1 MSLVRTVRMRVPAGMAKPGPAIGQALGPLGINMMDFCKSFNAKTQHLLPDTPTPVVLSAFSNRTFEFVIKTPPTSWLLKRCAKIDKGAKMPGLEIVGSVGTKAIYEIAKIKARDQHLDWLPLDGIARSVASTALSMGLKIRDDMKAEDRAIAREQKAG 158
BLAST of mRNA_H-paniculata_contig2848.7765.1 vs. uniprot
Match: A0A7S2CHZ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHZ2_9STRA) HSP 1 Score: 176 bits (445), Expect = 2.000e-48 Identity = 81/151 (53.64%), Postives = 115/151 (76.16%), Query Frame = 3
Query: 132 QERQGSAMALVRLVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQDTPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVGLKAIYEIALIRKKEIEVYRTPLEGVCRSVAATALSMGLEIVDDR 584
Q + + M++VR VR+RV AG+AKPGPAIGQALGPLGINMMEFCK FN+ T +V+DTPIP+ L+A+A+R+FT+ + P T +FLK AG+EK + PGHE+ G+V LK ++EIA I++++ + PL G+CRS+ TA SMG+ ++ D+
Sbjct: 5 QTSEAAKMSIVRTVRLRVPAGNAKPGPAIGQALGPLGINMMEFCKAFNDSTTKLVKDTPIPVLLTAYANRTFTFVNKSPPTTWFLKNAAGLEKGTTRPGHEMVGEVTLKQVFEIAKIKQQDEHLAHVPLRGLCRSIVGTAGSMGITVISDQ 155
BLAST of mRNA_H-paniculata_contig2848.7765.1 vs. uniprot
Match: A0A6V2RJT6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RJT6_HETAK) HSP 1 Score: 169 bits (429), Expect = 1.110e-46 Identity = 82/143 (57.34%), Postives = 104/143 (72.73%), Query Frame = 3
Query: 156 ALVRLVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQDTPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVGLKAIYEIALIRKKEIEVYRTPLEGVCRSVAATALSMGLEIVDDR 584
AL R+V +RV AG AKPGPAIGQALGPLGINMMEFCK FNE TK + + P P+ LSA+ DRSF + + P T +FLKRCAGI+K S PG+E G V LK +YEI L ++K+ ++ P E + RS+ +A SMGL++VDDR
Sbjct: 4 ALKRVVNLRVAAGVAKPGPAIGQALGPLGINMMEFCKAFNERTKDLTPEIPTPVKLSAYEDRSFDFTTQSPPTSWFLKRCAGIQKGSGRPGYEAAGTVTLKQVYEIVLAKQKDAHLWHLPPEALARSIIGSAASMGLKVVDDR 146
BLAST of mRNA_H-paniculata_contig2848.7765.1 vs. uniprot
Match: A0A7R9UAQ2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAQ2_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.470e-44 Identity = 78/149 (52.35%), Postives = 109/149 (73.15%), Query Frame = 3
Query: 159 LVRLVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQDTPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVGLKAIYEIALIRKKEIEVYRTPLEGVCRSVAATALSMGLEIVDDRRKPDATD 605
L RLV++ V AG+AKPGPAIGQ+LGPLG+NM EFCK FN T Q+ PIP+ L A+ DRSF ++ P T +FLK+CAGIEK + PG+E G V LK +Y IA +++++ ++ TPL+ +CRSV +A S+GLE+VDDR++ A++
Sbjct: 55 LKRLVKLLVPAGAAKPGPAIGQSLGPLGLNMAEFCKTFNAKTSSYEQNVPIPVVLFAYEDRSFELWLKSPRTSWFLKQCAGIEKGAAKPGYETVGHVTLKEVYHIAKLKQRDHHLWLTPLQSICRSVLGSAASLGLEVVDDRQQSQASE 203
BLAST of mRNA_H-paniculata_contig2848.7765.1 vs. uniprot
Match: A0A7S2STT6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STT6_9STRA) HSP 1 Score: 162 bits (411), Expect = 4.120e-44 Identity = 72/142 (50.70%), Postives = 108/142 (76.06%), Query Frame = 3
Query: 159 LVRLVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQDTPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVGLKAIYEIALIRKKEIEVYRTPLEGVCRSVAATALSMGLEIVDDR 584
+ R+V++RV AGSAKPGPAIGQALGPLGINMMEFCK FN+ T+ + +TPIP+ L+A +R+FT+ + P T +FLKRCAGI+K ++ PGH + G V ++ +YEIA ++++ + L+ +C+S+ A+A SMG+++ +DR
Sbjct: 4 VARIVKLRVPAGSAKPGPAIGQALGPLGINMMEFCKAFNQATEQLAPNTPIPVRLTAMTNRTFTFVTKSPPTSWFLKRCAGIDKGAQRPGHSVVGSVSVQQVYEIAKAKQQDDHLQHLHLKSLCQSIIASATSMGIQVTNDR 145
BLAST of mRNA_H-paniculata_contig2848.7765.1 vs. uniprot
Match: A0A7S1C344_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C344_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.930e-40 Identity = 72/141 (51.06%), Postives = 107/141 (75.89%), Query Frame = 3
Query: 156 ALVRLVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQDTPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVGLKAIYEIALIRKKEIE-VYRTPLEGVCRSVAATALSMGLEIV 575
A+ + RMRVLAG+AKP PAIGQALGPLG+NMMEFCK FN+ T +V +TP+ + L+AF DR+FT+++ P +FLKR AG++K + +PGH+ G+VGL+A+YEIA ++++ + + P+ + R+V ATA SMG+++V
Sbjct: 3 AIKGIARMRVLAGAAKPSPAIGQALGPLGVNMMEFCKSFNDRTGALVSETPMRVHLTAFQDRTFTFDVLSPDVSWFLKRAAGVDKGATSPGHDSPGKVGLRAVYEIAALKQRHDDHLSALPMPALVRNVCATAKSMGIKVV 143
BLAST of mRNA_H-paniculata_contig2848.7765.1 vs. uniprot
Match: F0W615_9STRA (50S ribosomal protein L11 putative n=2 Tax=Albugo TaxID=65356 RepID=F0W615_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.900e-39 Identity = 70/139 (50.36%), Postives = 97/139 (69.78%), Query Frame = 3
Query: 156 ALVRLVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQDTPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVGLKAIYEIALIRKKEIEVYRTPLEGVCRSVAATALSMGLEI 572
A+ +VR+RV AG A P PAIGQALGPLG+NMMEFCK FNE T H++ + P P+TL+A ADR+F ++++ P T +FLK+CAGI S PG G + L+ IYEIA I++ + + L +C+S+ +A SMGL+I
Sbjct: 3 AIKGVVRLRVAAGKASPSPAIGQALGPLGVNMMEFCKSFNERTSHLIAEVPTPVTLTALADRTFEFQIKTPPTTWFLKKCAGITSASATPGEVFVGNIKLRHIYEIAKIKQTDENLDFMELPSLCKSIIGSAKSMGLKI 141
BLAST of mRNA_H-paniculata_contig2848.7765.1 vs. uniprot
Match: A0A484E7J2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7J2_BRELC) HSP 1 Score: 150 bits (378), Expect = 1.950e-39 Identity = 70/136 (51.47%), Postives = 98/136 (72.06%), Query Frame = 3
Query: 168 LVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQDTPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVGLKAIYEIALIRKKEIEVYRTPLEGVCRSVAATALSMGLEIV 575
+VR+RVLAG A P PAIGQALGPLG+NMMEFCK FNE T I ++ P+P+ L+A +DR+FT+ + P +FLK+ AGI S PG ++ G V L+ IYEIAL+++++ V LE +C+++ +A SMGLE+V
Sbjct: 8 VVRLRVLAGKASPSPAIGQALGPLGVNMMEFCKAFNERTSQITENIPVPVVLTALSDRTFTFITKTPPASWFLKKAAGITSGSATPGQQVIGTVHLRQIYEIALVKQQDEMVDYIDLESICKTLIGSAKSMGLEVV 143
BLAST of mRNA_H-paniculata_contig2848.7765.1 vs. uniprot
Match: A0A5D6XPX0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPX0_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.950e-39 Identity = 68/136 (50.00%), Postives = 99/136 (72.79%), Query Frame = 3
Query: 168 LVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQDTPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVGLKAIYEIALIRKKEIEVYRTPLEGVCRSVAATALSMGLEIV 575
+VR+RVLAG A P PAIGQALGPLG+NMMEFC+ FNE T +++ P+P+ L+A+ADR+F + ++ P+T +FLKR AG+ S PG ++ G V L+ IYEIA +++++ V LE +C+S+ +A SMGL +V
Sbjct: 8 VVRLRVLAGKAAPSPAIGQALGPLGVNMMEFCRAFNERTAKHIENVPVPVVLTAYADRTFKFGIKTPATTWFLKRAAGVTSGSATPGQQVVGSVSLRQIYEIAQVKQQDDNVDYIELESICKSLIGSAKSMGLNVV 143
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 206.1 |
| Seed ortholog evalue | 1.3e-50 |
| Seed eggNOG ortholog | 2880.D7FX78 |
| Preferred name | MRPL11 |
| KEGG ko | ko:K02867,ko:K03260 |
| KEGG Pathway | ko03010,ko03013,ko05416,map03010,map03013,map05416 |
| KEGG Module | M00178,M00179,M00428 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000027,GO:0000313,GO:0000315,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005762,GO:0005829,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0019866,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032543,GO:0032984,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070013,GO:0070125,GO:0070126,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098798,GO:0140053,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 |
| EggNOG free text desc. | rRNA binding |
| EggNOG OGs | COG0080@1,KOG3257@2759 |
| Ec32 ortholog description | Ribosomal protein L11, bacterial-type |
| Ec32 ortholog | Ec-10_004590.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01610,ko00000,ko00001,ko00002,ko03011,ko03012,ko03019 |
| Exons | 4 |
| Model size | 1640 |
| Cds size | 489 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2848.7765.1 >prot_H-paniculata_contig2848.7765.1 ID=prot_H-paniculata_contig2848.7765.1|Name=mRNA_H-paniculata_contig2848.7765.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp
MALVRLVRMRVLAGSAKPGPAIGQALGPLGINMMEFCKKFNEDTKHIVQD
TPIPLTLSAFADRSFTYEMRPPSTMYFLKRCAGIEKCSKNPGHEICGQVG
LKAIYEIALIRKKEIEVYRTPLEGVCRSVAATALSMGLEIVDDRRKPDAT
DRDNERIGVGSL* back to topmRNA from alignment at H-paniculata_contig2848:5031..15390- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2848.7765.1 ID=mRNA_H-paniculata_contig2848.7765.1|Name=mRNA_H-paniculata_contig2848.7765.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10360bp|location=Sequence derived from alignment at H-paniculata_contig2848:5031..15390- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTTCGCTGGACATCCTGTCAATGCTTGCTACTTTCTTGAGCCGGTGCTG
CAATAGGTTCGTACAAGCCTCTCATCGTCCTCACCTTTGATAGCAAAGTG
TGTGGCTGCAAACGCTGTGGTGTACTGTACACAGGAGCGACAAGGCTCAG
CAATGGCGTTGGTGCGGTTGGTGCGAATGCGGGTTCTCGCTGGCTCGGCG
AAGCCAGGCCCTGCCATCGGTCAAGCGCTAGGACCTCTGGGCATCAACAT
GATGGAGTTCTGTAAGAAGTTTAACGAGGACACTAAGCATATTGTGCAGG
ACACGCCAATACCACTGGTGAGCTTCGCGTCACAGTGACTTCTATCTCAC
AGGATGCAGTACTTACTGGCCGTCACGTACTATATATTTAGTTGACTCCA
CTCTTCGCCTCGCAGACCTCTATCATCACGCTGCCGACCATCAGGATGTC
TATCATCGAGGACGAATGATGGCGCTATCCATTCAATGAGGCTACTCGGG
CAACTGTCTAGTCAGCTGTACTGTACAGCAAGTACAGATATCATGGGACG
GATGGATATATGTGTTGAAACATACTTGAATATAATATAGAATACTGTTC
CGAAAGTCGATGTTGAGACCGTGTTAGTATGTCCAGTCGGTACAAACTCA
GTGGAGAACAGCCAGTACAGTATATTTGCAGCAAATGTGCGATATCTGCT
TCAATGGCGAATTAGGCTCAACCCAATTTATACAGATGGTATAAACTCAG
TGGGGAACATAGTCAGTACAGTATATTTGCAGCAAATGTGCACCCACGGT
TACATATTTGCGCTCAACTTTTGAAGTTTGTGCATCGACTCATGCCATCA
GGCCACTTTTCATGGCATACCTTCACCCTGCTGATCTCAGCTGGCTTCTT
CTGACCTGAAGTAAAAGCGAGTACTTCGCGACAGCTATTTAGTGCCTGTA
CAGTTGAAACATACTGAAGCGTTCTGTCCTGATGTAATCGCAACCTCTCT
GTATTCAAATTATTCTATTACATAGTTGTTAGCGAAGTACGTCGTTTTTT
CTAATGAGCGGAGCCTAGCTGAGGTACGGATACGTGTCTCGCAAAAGGCA
TGTATCTCTAACTTTACCAGTCACACCTTGCAAACTCGTTGAAACCTCAA
AGAGGAAGGGGGGCGGGGGGCAGGGTGATAAAATCGCTGGAATCCTCGCT
TTCAGACATGCATGACCACTGGAAATGGGGGAATTTCTCATGTTAGCATT
TTTCCGCAGGTGAGGGGCCGCTGCCCGTCATGAGCCGTAGGCTACGAGCA
TTTGTTTTCCTGCATGACCGAAGACGTGATCCATTTGATTTTCATGCTTC
GGTGGGTGACCATGTATGACACACACACTGGTGCACAGCCATCGCGAGTG
GTTTATCATATGCGTTCCTATCAAGCGCTGCAGTCGCGACGCGCAGAACC
ACGTCAACTCCTTTTTTGTTACTGTCTCCTGTGTCTCTGGCTGTCTGAAC
ACCAGCAGCTCCTGATCGCCTTAATCAAGTAGCAGGCATAGCATAGGAAA
CTTTTCCCACCATATTCGTTTTTATTTGGCTTTTAAAATTTTCGATGGGG
CTGTTCGTTGGATGAGTATGTTATTCAGTAACGGACCATGTATGAGAATA
TTTGGATGATGATATATGGTATTGTCATCGGTATTAGAGTATGTCATACA
ACATGTGAAGTACTATATATTTAGGATATGGGTGAAACCCACATAATTCA
CTTCTTCTCAAGTGTAATTTATTACACTGTTATTTCTTCCTTGGGTCACG
CCCATGTGGTCTGCGGACCTGTGGGCGTGTGGAATCGACATGAGTCTTTC
CTGATCATGAGAGTATCACGGCAAATTCAACAAGGGCTATATATTGTATT
GGAGCCGGCGCCTCCAGTATAGGTCCCAAAGAAGGGACATGCATAAGAAG
AGTCCAGATTGCCTCGGAGGGCACTGTGTTTACACGTATGGCACGTATAC
AACTCCTATAGCTCCACATCCAGAGTGCTGTCTCTTCGGCTTCACTATAC
ATACAACGTCAACATGGTGTGATGATCGTGGATCAAATCCATGTCCGGGC
GGAGTGAGCTTCTAACGACGTATTACACGCTCAACAATTGGACAATCAGA
AACAACAAAACAAAATCGCCTTCGAAATCGCCTTCGTTTTAGTTTCCCTT
TTGTTTTGTCCAGAGGGGCTCGGAGAGAAAATGCGATATGAACAAAGGAT
TGACAAACGATTAACATCACAACCAAAACAGGCTCACGGCAGCGAGAGCC
GTGCTGCCTCCAAAATAGCGCTTTATAGCCCGAGAAGTAGCTCTTGGTCA
ACCACCATACCATGTCTTTGGTTTTGGTTGAGCCTGTTGGGAGCTGAACG
AAAAGATGCTTCCTCGTGACGTGGACTGACAGCAAAAAGCGGTGCCGAAC
CTCAGGGTTGCTGAGAATCACATGTGCTTTGTTCTTTTCACTGATGTTAT
TGAGGCTCTCCCAATATTGAACTATTACACTGAATTGGAAGTCAACCGTG
TTCTTTAGAACTATGTCTCTGCGTCGAGGTGCCTGGGTATATCTACTGCG
GTGTCTGTGGGTTGCGCTACACGCGATGAATAGTCAGGCATTTATTCTTG
GTTCGCTCGTACAGTGTTGGAAATAGAAGATAAAACTACCACCAAAGTAA
TGAACCTCTGACTTTCATGCTAGTATAGCAGAATATATAGAGTCTTGGCT
TTGGTATTTGGTGCTTGTATTTTGGAGGCTGTTTGATTCCTGCTGTTGAA
TACATGAAAATTGATATTTTTATAAGAAATGCTGAGCGCTGCAGTCGTTG
TGCTCAAACCATCAAACTGCTGCCTGTGCTGTCTATCTGTCTAGACAGCG
GCAGCTTTTTTTTTCCTTATTTCACTCTTTTGTTTTTTCGTGTCTGCAGG
TCCATCTCCCTTGAAAAGCCGGCGTTACAATTTTTATCTGGTTCGCTTTT
TGTGTAAAATCTAATACAAGTATACATTGATAGGGCTGTGTATCGGTGAT
TCGGATAGATGCTTGCACATCGATCCGTCGGCGAAGCCAGCATATCATAA
ATATATCGGCGCAAACTAGGCGACTCAATCGCATGAAGAGTAGATGCCAG
GTGAGCATTTTGCCACCAGAGTCCAGCGGCCTCACCCGGCTGCTGGCGGT
AGCTATATTTATCTTGAACATTTTTTTTTTTTTAAGAACAAACAAGGGTC
ATTCCTAGCAGGCACAGGCGAACGGTTTTTTGGGCTGTCTGTCGGTACTG
ATAAAAAAATAATATGTTGTATATTGGTCCGATAGATACCTATGGATCGA
CCGTCTTCCCGATACATGAATATATGTCCTTAATAGTATGGTCATTATCT
ACTGAATGCGCACACGATATAGTCATGCTCCAACAGCTCACAGCACCACA
TGAACGACATTGAACAGCACACCGCAAAGCAGCATACTCACACGCATGAG
CTCCCCCAGACCTCTAGCACGCCGATGACATAGTGCTTGGCATGCTCTTT
TCTCGTTTTCCTTCCCAGTAACCCCACGAACGTTGTTTGAGCTCATTTTT
TTTTTTTTTTTGTGGTCCGAAGTTCTCCTTTTTCTCCAATTTTTTCCCGT
CAGTTTCAGTCCAGGCTGCCTCCAAGAGGTGCTCGAGATGCTTGATTTTG
AGTAGAGATGAAGCCGAAACGCATTATTTTCTTGCCTCCGGCAGCACCTC
CGGCGAGACCACCTCACCACCCGGGGAGAGACGTTGGAGCTAGCGTTACA
GCGCTCGCGTGGTCGTGCTCACACATTCGTCTAATGCTTCGCGCGGCTGG
CCCGCTTCGCTCACACCGGTACATTACCCATATATCGGTTATATTTCGGT
ATACCGGCTTCACTGACCGAGCGATGTATTTGTATGTTTTCAAATGACTG
ATAGGCAGCCCCAGAATTTTTCAGGCGCTACAGACAGTGTAAGCGCATCG
CCAAACCCGCACACAAGGCTTTGGAAGCGCGGGATTGCTGATGTAGTTCT
CCTTTGATGGCTACAAGGCACTCCACGGCTCTTGCACTGTCGCACAAAGT
GTGTTAAGCGCGGCGCGCTCGATAGCACGTGAAATGCAGAAATGACGGAA
TTTGAGCCCAAATTTCAGCTTCCATATTAAAATCAAGTGGGCGTCTAAAA
TTTTACGTTGTTCGGTTGCGAGGGGTCAGCCTTAAGAACATGTGGCTTCA
AAGTAAAAAATATGCACAATATCAAGCTGTTTTGAAGATCATCTGTGACT
TCGGAACACTGTTGTGTGCATTGCTCAGGTGTTGAATTATGTCACTTAGT
GGATAAAAATTACTACTAATAATACCATGGGGGGAAGCAAAATATCGGAT
ATATCAGTTGACGCACTACCGATATTCGTGTGTATGTGTGTGTGCGTGTG
TGTGTGTGTGTGTGTGTAATATCCGTATACCCTACACGACGATCTATAAT
TAAAGCATCAAGCTGCACTCAGAAACAAAGTTTAACAACGTTTATGTTTT
GAAAGCACCCTCGATCTCCGCGGCTGTACGTGAGTCAACTCGCCACGTCG
CGGTACCTTCCCTAACATCGGGTTAGTCGTTACCTTCTTCGTTGAAATTT
TGCTTCATGAGGCGATGTCTTGGAAGCTTTAACAATGAACCGCTCTCGCT
CAACCTTGGTGCCTGTTTACTGCACAGACTCTGTCGGCTTTTGCAGACAG
AAGCTTCACGTACGAGATGCGGCCACCTTCCACCATGTACTTCCTCAAGC
GCTGTGCGGGGATAGAAAAGGTATATAATGTATAGAAACGATGGACGGTC
GTTGTACATGTGTGGCGAGTGTTTTTCTCATGTTGCATTTCGCGTATTTG
GTTTCTTGATGTTTTCGGATTGTCCGTTTTCTATGCTACTACACGTTAGT
TATCGGAGGGCTATCGGTTTATATCAAATAAACGGTAAGATATGCCGCAG
AATTTAACAGGTGACTTGCATAGGCAACCATTACAAAAAATAAAAAGTGA
CAGTATTGCTTTTGGGCTCGCCATTTAGATCTTGCACAGATGTTGCCGTT
CCCTTTCCGAGGGTACCTGATATCCTGCAGATCGTAGGCGTGCAGTTTGT
AGTTAAAAGCTTTGTTGAATATATCACAGATCGGATGAAGATTTCATCTT
TCAAGTGAAACACCTTCATGAATTTTTGTGTTTCCCGTGCTACAACTGTT
GGGGGTCCCAGGAACGTTACAAGCACTCCGGACTGCGCCCCGCGATCAGA
TCGGCCATGCGCCTACTTTTTCCAAATTTCACTCTATGTGATGACCCATG
CAGTTGCTATCTAGGGAATGATTTGGCCCCATATTAGAAATATTTGAGTG
TTCATATCCCATTTGTGCTGAATTTTTCCGTGTGCATGTGTTGCTGATGT
TGTGACAAGAAGATTGATGCTTTTGTTAACTCCTAGCTAGTCATTGTTCG
AAAGTTATGACCCAATATGATAACGGAGAAAAAATGTACAGAACTGTATG
GAATTTTGATTTCCTGAGTACTTGCACCTTGAACGGGCCACCCCCATTCC
AATCGTGGGAGTTTTGACCTGACTTTTTAGGAGATGAGTGCATCATGCAT
ACCCAAGGGTATTTATTCACCCTGGGGGTGTTTCTGTTTTTTTTGTTTTT
TTTAGTTTGTTTCGATTTTATGGACAACGAAATAGGAGTTAATCTGTCAG
GAACCAGACCTCGCAACGATCCCAACGATTAAAGTTGCTGTTAACGACCC
GTCGTGGATAATCACGAATGTGTCTGTCGATAGATTGCCAACCAGCGGTA
GACAGCTGGTGAGCGCATCTCAGGTCCAGACGGCTTTGTTTTTTGTTTTT
TTTGCGCTGATCATCCGTTTGTACTTTTTTCAGTGTATGTAGCACCAGAA
CAGTCCTTCAGCGGGCGGTGCTTCGTCAGCATGTTTTCTGAATAATACAT
AAAACCTTCCACAGCTGCTCATCTCACAGACTCCTAAAATGTAATATATA
AGTTGTGGAGCATTTCATGTTGCAAACACTGCAATGGTTTTCCGCCTTTT
GAAAACGGTCGTTTTCCGAACTTGGCTTCACCTATTGAGGGGTTCGCCTC
GTTCGTGTGCACTATGTGCAACCTCTCATGTGGAGAACACGTTCATGACG
TCACTGATATTCTCGAACCCCGGCCGATCCCCTACGCAACATGCGGGAGG
CGTTTTTTTTGCTTCTATTTTCGGACCAATTTTCTAGTTGCGTCCCTCTT
GTGAGGGTCGCCTCTACTATGGAAATATCTATCGGTATAGATCAACCAGC
TGCACACTACAGTATAACTCTGAAACTAGACGAACACTTGAGTAGAGCAG
CGCGCCTACAACAACCAGTCGATCGCGAGAGCGTCGTGTTGTTACATGTT
ACGTGTGCATGTACATGTGTTCATGTATATGTATACACATACACACACAA
TAATGGATACTACGATATGTCAGTTAACGCCCAGTGAGCTGTCTTTTTCA
AACTGCACTGCTTGAGTTTCTTTCACCAGTATTTTCCGAAACACGGCAAC
CAAAAGAACGAATCGTGTTTTATTGTTACTAATTTTTACCGAATGCTTTT
AATGTTTTTCAAAATCTGTTGTACTGATATATATATATATATTGAAATTG
ATTTTCAGGAAAAGGCCTATTTCCAACATGACCCAGGGTCCCCATCTCAA
AGTTGGGTCCCCATTTCACCAATATGCTGATATATATATATATATATATA
AATACACAGAAGTAGAAGTGTGTGGGAAGCTTTTATCGACAGTATGTTTT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCTTCT
TGTCGAAAGAGCACCCTCGTCCTCCGCCAAATGGATTCTGTTCGTTATTT
TTTTCCCGCTGGCGCTTTGCTCGTGTTTCTTTGTTCGTGTGTTGGGTGGT
GACTTACAGTGCTCGAAAAACCCGGGGCATGAGATCTGTGGACAGGTGAG
AACATGAGTGGCTATGCTTGTTTAACCTTGGACTGCGAAAAAAAAAGAAG
CTGGTAATCTTAGTGACCACGGGCGAAAATAGTTTTATGAGAGAATAGAG
GCTAGACTTTTCAGTAACAGCGTGCGCAGCATATATAATGTACTCTTTTG
TGTGTATCGAGGTACAGTAAATAGTACAGTTGGCCGAAGTGCAGCGTGCA
CAGGGAAGGACTCGGATGAAGATTTCATCTTTCAAGGAAGAATACCCTCA
CGGAACCTTCGAACCGTGAACGTTTATTCAGCCTTTATACTCGAAAGTAG
GAAAATGTGCGGCAGTGCGCTCATACTTCAAAATCGAACACTCCACGAAG
GGTGGAAGACTTGCAGCTATCTATCTATATATCTATCCAGTCGGACGTGG
TTTTGAAAGCGCCAAGAGTTCTCGTGCTGTTATGGTCATGTTCCAAAATT
CGAGACGACCTTCGTTGACCTTCATCCGAGGTGTGTGTGTGTGTGTGTAT
GTGTTTAGCGGTGGCATCGAGTTTAACAGATATTTCAACACGACTATAGT
ACAGGCTGACTCCATTGGAGACCGTGTTCCATAAAAAATAAGAAATTATT
GTGTGGTTCAACCCAAGCAGAACAATCAGTTGCCGCCACGAGTAGATATG
CTAGCATCACTTGTTTTTGCGACTCTTGCAGAGAATAGCCGGTAGTCATC
ACACTATTGCGGTACGCACATAAAAATGGTCTTCTCTGCAGACACTACTA
ACTGACTGCTACAGTCAGTTGTACAAACACCAACCAGGGTGTATTAAGAT
ACACCTATACTGTACTGGTAGCACCGAATGAAGTACAGTCAGTCCTTGTG
GGTGGTGATGGTGCACACACCAAACAGCAGACAGACGGACGGACAGACAG
AGTATAGAGCAACAAACCTGGCCGGATAAATCAGACCTGCTTGGCCCGAA
CGACACAATTATGACTATATAAATGAAAAAATCCGCCATATTGGATGAAA
TAGATGGGGATCAGTACGGCGTAGTAATGCATTCGGCCTGAGCGGAGTAC
TCTGTTCATGTACGTGAAGGCTGGCCGTTGCAGCCGCAACGCTTCCATTT
GTTCCGTGTGGAATTAGTGTAGCTGATAGACTTGCAATACACACAAACAC
GGGTTAGGGGTGGCATAGGGTTGGACACGGATTTAAATCGATACAGTAGG
ACAGGTGGACAATGACGATATATACAGGCAGGGTTTTTGTCAGGGGTTTA
ACTTCAATGTCCACGCCATCGTGTAGGTAAGTAACTAACTACTGGGGTCG
TTGTGCTTGCTTCAGAATATATGTTGCGACGGTCATCGTTTACGTGTCCA
AAAAGTGTCCAAGTAGACTCGACTTCCTGCTCGGTCACAGGAAGTCATAT
AACTCCTTTAGCGACATATGATCACCTAGCTCATATGCTTGACAGCTCTT
TTCCCCTTTCGATTGACATGTAAAATGAAGAGGTGGCAGCCATACGAGTC
GCTACTAACCAGTTCAGTTGGCGCTCAACCCTTTGAGTCTTGAGGAATAT
ATATATATATACTCCCATAGTCCCGCGGCCGAAGATTTGGTGTGAAAGGG
AAAGGGATTGGAGGTTCAAAGGGCAACAAACAGCACGCGCAGCCCAGAGT
CTTTCGTATGTAGATATAGCAGACAGAGCTGTAGTGCGCTGGGGTCAAGT
TGTGATAAGGGGTCCCGAATCAATTTTCGCATGTCATAATCCAGCTCCCC
ATGGATCTAAGGCTGAAGGTTTCAGGTGTTAACCCCCTCCCCCCCCCAGA
AAAAAAAGAAGCAAAATCCAACGCCAGCGTTTCGGAAACATCATCCGGCA
AAATCTGCCTCCAAGGCTTTGCCTGAGCGTTATATGGTGTCGAAAACGAG
TGATGTGTTCGTATTGGTGCCAATCATAAGAATGTAGCACTCGGTTAAAA
AGCACCGAAAGTCCAGTGGTCGTTGCTTCGCTCCTTCGTCCGTCAGTCCC
CTTTCCCTGCTCGACCGTGGCTATGGTGGATGACGACGATTCGTTAATGA
ACTGAAAAGTTATTTCATCTTTTTATTCATGTTTCATTTAGTCATGGTTC
GTTTGCTCGTGTTCAGGTTGGATTGAAAGCAATATACGAGATAGCTCTCA
TCAGGAAGAAGGAAATAGAAGTGTACCGGACGCCCTTGGAAGGCGTTTGC
CGATCGGTCGCGGCGACTGCCTTGTCCATGGGCCTGGAGATCGTGGATGA
CCGAAGAAAACCCGATGCCACCGACAGAGACAACGAAAGAATAGGTGTTG
GATCGTTATAGTCCACACATTTTTTTCTGCCTCGAGAATTTTGTTTTGTC
GATGGTGCAAAGTGGTGGAGGTCGCTCACCTTTCAATCTCATCGAACTGG
GGTGGCCGGGAGGAGGGCAGGTGGAGTGCGCATACTACGGCGAGGGTAAC
AAGGCTCCGCATTTGCTTGCAGGGCATTAATTAAGCTCTCTGTCCCTTCC
CCTCCCCCCTCCACCCTCTCGCTGGGCAATGAGGGGGGAAAAGTGCTTTA
CTGACTGCACAACAGCACCTCGATTGTTTTTTCTCGAAACCTGAGTCGCT
TATGTGCTAATATTACTTACGGCGTCGATAGCTGTATCGTGTGGGAAGCA
TATACACATGTGTCTATCTGTCGGAAGACGTGACCCCGCGGACATATATG
GATATTTGGAGTAGTTTAGACGAGAATTTAGAAGTATGCAATCGAATGTT
CAGCATGACAACGTTTATTCTAAATATGTATGTGCCCTGGACTGAGCACG
ACTGGCTGCTCAGAGTAATAATAGCAAAACAACTAAACATGCTAAATAAG
TTGTGTCATCGTCCATTCCGCACATGCTCTGCTGAAATGCAAACAAAAAT
GGAACTTTTCTTAACTTTTGTCGAAGCTACTTATAGTCACTTATTCGTAT
TCGTCTGGGGGAGGTGAAAACCTTGGGTTCCTTCTCGCTGTGCTGCGCAG
ACGGCGTTTTACCCTTCCATACAAATCAACGTTGAAAATCGTTGTCACCC
GAGATTTTACCATGTCTTTCTTCTTGTAGTCCACACGATGGCGGTAACTT
GCTTTTGAAGAATGCTAGTAGTAATGGGCCAGTTGGCCAGTGTTTTAGAC
CCTTTTGCCAGCGTACCTAATACAGAGCCCCGTCGTGACCAAGACGATTA
CGTTAGCGCAAAAATCCCAGGGTTCTAGCAGGATATTTGGTTTAGTTTTG
GGAATGAAGACAAGGCCTGCTTTGTCTGCTTGAGGTTATCTCGGAATCGT
TTCAACACGT back to topCoding sequence (CDS) from alignment at H-paniculata_contig2848:5031..15390- >mRNA_H-paniculata_contig2848.7765.1 ID=mRNA_H-paniculata_contig2848.7765.1|Name=mRNA_H-paniculata_contig2848.7765.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at H-paniculata_contig2848:5031..15390- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGTTGGTGCGGTTGGTGCGAATGCGGGTTCTCGCTGGCTCGGCGAA
GCCAGGCCCTGCCATCGGTCAAGCGCTAGGACCTCTGGGCATCAACATGA
TGGAGTTCTGTAAGAAGTTTAACGAGGACACTAAGCATATTGTGCAGGAC
ACGCCAATACCACTGATGGCGTTGGTGCGGTTGGTGCGAATGCGGGTTCT
CGCTGGCTCGGCGAAGCCAGGCCCTGCCATCGGTCAAGCGCTAGGACCTC
TGGGCATCAACATGATGGAGTTCTGTAAGAAGTTTAACGAGGACACTAAG
CATATTGTGCAGGACACGCCAATACCACTGACTCTGTCGGCTTTTGCAGA
CAGAAGCTTCACGTACGAGATGCGGCCACCTTCCACCATGTACTTCCTCA
AGCGCTGTGCGGGGATAGAAAAGACTCTGTCGGCTTTTGCAGACAGAAGC
TTCACGTACGAGATGCGGCCACCTTCCACCATGTACTTCCTCAAGCGCTG
TGCGGGGATAGAAAAGTGCTCGAAAAACCCGGGGCATGAGATCTGTGGAC
AGTGCTCGAAAAACCCGGGGCATGAGATCTGTGGACAGGTTGGATTGAAA
GCAATATACGAGATAGCTCTCATCAGGAAGAAGGAAATAGAAGTGTACCG
GACGCCCTTGGAAGGCGTTTGCCGATCGGTCGCGGCGACTGCCTTGTCCA
TGGGCCTGGAGATCGTGGATGACCGAAGAAAACCCGATGCCACCGACAGA
GACAACGAAAGAATAGGTGTTGGATCGTTATAGGTTGGATTGAAAGCAAT
ATACGAGATAGCTCTCATCAGGAAGAAGGAAATAGAAGTGTACCGGACGC
CCTTGGAAGGCGTTTGCCGATCGGTCGCGGCGACTGCCTTGTCCATGGGC
CTGGAGATCGTGGATGACCGAAGAAAACCCGATGCCACCGACAGAGACAA
CGAAAGAATAGGTGTTGGATCGTTATAG back to top
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