mRNA_H-paniculata_contig2847.7763.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE) HSP 1 Score: 165 bits (418), Expect = 5.750e-47 Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 1
Query: 1 GINPQGFKSKKVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIFKGERVQPAWVMEP-GPEGSLYGTKEPPMMQWSLYLRYIKKFHKFTVDSGLVDSKPQVLIFDGHNSHVTIDVLKYAMAHNIILFELPSHSSHITQPLDVCAFGIFKCNITDIL 486
G PQG K+ K AE QK G RSNSREN+TVVAT+ A G P I FK +R+Q W +E GPEG+ Y + MQ +++ Y+K FHK D GL+D KP +L+ DGH SHV+++V++ AM I+LF+LPSH+SHITQPLDV AFG FK ++ +L
Sbjct: 171 GTTPQGTKTTKAFAESGQKVVGSMRSNSRENITVVATISADGHTWAPTITFKRQRLQVDWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLHDGHASHVSVEVIRLAMNLKIVLFQLPSHTSHITQPLDVVAFGRFKKSVPSVL 333
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Match: A0A6H5KN20_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN20_9PHAE) HSP 1 Score: 167 bits (423), Expect = 1.870e-46 Identity = 86/172 (50.00%), Postives = 111/172 (64.53%), Query Frame = 1
Query: 10 PQGFKSKKVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIFKGERVQPAWVMEP-GPEGSLYGTKEPPMMQWSLYLRYIKKFHKFTVDSGLVDSKPQVLIFDGHNSHVTIDVLKYAMAHNIILFELPSHSSHITQPLDVCAFGIFKCNITDILGIWAREHGLKMP 522
PQG K+ K AE QK G RSNSREN TVVAT+ G P IIFKG+R+Q W +E GPEG+ Y + MQ +++ Y+K FHK D GL+D KP +L+ DGH SHV++ V + AM IILF+LPSH+SHITQPL+V AFG FK ++T +L + G +P
Sbjct: 229 PQGTKTTKAFAESGQKVVGAMRSNSRENTTVVATISVDGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVQVFRLAMNLRIILFQLPSHTSHITQPLNVVAFGRFKKSVTRVLASFYHNSGGLLP 400
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 166 bits (421), Expect = 1.940e-46 Identity = 86/175 (49.14%), Postives = 111/175 (63.43%), Query Frame = 1
Query: 1 GINPQGFKSKKVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIFKGERVQPAWVMEP-GPEGSLYGTKEPPMMQWSLYLRYIKKFHKFTVDSGLVDSKPQVLIFDGHNSHVTIDVLKYAMAHNIILFELPSHSSHITQPLDVCAFGIFKCNITDILGIWAREHGLKMP 522
G PQG K+ K AE QK RSNS EN TVV T+ A G P IIFKG+R+QP W E GP+ + Y + MQ ++++Y+K FHK D G++D KP L+ DGH SHV+ +V+K AM NIILF+LPSH+SHITQPLDV AFG FK +T +L + +G +P
Sbjct: 166 GPTPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLP 340
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.210e-45 Identity = 83/175 (47.43%), Postives = 115/175 (65.71%), Query Frame = 1
Query: 1 GINPQGFKSKKVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIFKGERVQPAWVM-EPGPEGSLYGTKEPPMMQWSLYLRYIKKFHKFTVDSGLVDSKPQVLIFDGHNSHVTIDVLKYAMAHNIILFELPSHSSHITQPLDVCAFGIFKCNITDILGIWAREHGLKMP 522
G PQG K+ KVIAE QK G RSNSR+NVTVV T+ AAG + P II+KG+R+Q WV GP + + MQ ++++ YI+ FH+ +D GL++ P VL+ DGH SHVT +V+K A NI+L+++PSHSSH+ QPLDV +FG FK IT +L + +G ++P
Sbjct: 180 GSTPQGTKTMKVIAESGQKVVGAMRSNSRDNVTVVVTISAAGATLAPWIIYKGQRMQADWVKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKWEITKVLSAFPARNGGRVP 354
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE) HSP 1 Score: 163 bits (413), Expect = 5.760e-45 Identity = 85/163 (52.15%), Postives = 108/163 (66.26%), Query Frame = 1
Query: 1 GINPQGFKSKKVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIFKGERVQP-AWVMEPGPEGSLYGTKEPPMMQWSLYLRYIKKFHKFTVDSGLVDSKPQVLIFDGHNSHVTIDVLKYAMAHNIILFELPSHSSHITQPLDVCAFGIFKCNITDIL 486
G PQG K+ K AE QK G R+NSREN TVVAT+ A G P IIFKG+R+Q +V GPEG+ + + MQ +++ Y+K FHK D GL+D KP +L+ DGH SHV+++V+K AM IILF+LPSH+SHITQPLDV AFG FK +I L
Sbjct: 171 GTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVERNGPEGARHTCTDSSFMQGDVFMNYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSINKSL 333
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 162 bits (410), Expect = 6.420e-45 Identity = 82/175 (46.86%), Postives = 113/175 (64.57%), Query Frame = 1
Query: 1 GINPQGFKSKKVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIFKGERVQPAWVM-EPGPEGSLYGTKEPPMMQWSLYLRYIKKFHKFTVDSGLVDSKPQVLIFDGHNSHVTIDVLKYAMAHNIILFELPSHSSHITQPLDVCAFGIFKCNITDILGIWAREHGLKMP 522
G QG K+ KVI E QK G RSNSRENVTVV T+ AAG + P II+KG+R+Q WV GP + + MQ ++++ YI+ FH+ +D GL++ P VL+ DGH SHVT +V+K A NI+L+++PSHSSH+ QPLDV +FG FK IT +L + +G ++P
Sbjct: 172 GSTSQGTKTMKVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVIDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVP 346
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 166 bits (419), Expect = 8.500e-45 Identity = 82/177 (46.33%), Postives = 114/177 (64.41%), Query Frame = 1
Query: 1 GINPQGFKSKKVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIFKGERVQPAWVMEP-GPEGSLYGTKEPPMMQWSLYLRYIKKFHKFTVDSGLVDSKPQVLIFDGHNSHVTIDVLKYAMAHNIILFELPSHSSHITQPLDVCAFGIFKCNITDILGIWAREHGLKMPQE 528
G PQG K+ K + QK R+NSREN T+V T+ A G P IIFKG+R+QP W E GP + Y + MQ +++++Y+K FH+ GL+D KP +L+ DGH SHV+++V++ AM NI+LF+LPSH+SHITQPLDV AFG FK +T +L + R G +PQ+
Sbjct: 170 GTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQK 346
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE) HSP 1 Score: 166 bits (419), Expect = 2.970e-44 Identity = 82/177 (46.33%), Postives = 114/177 (64.41%), Query Frame = 1
Query: 1 GINPQGFKSKKVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIFKGERVQPAWVMEP-GPEGSLYGTKEPPMMQWSLYLRYIKKFHKFTVDSGLVDSKPQVLIFDGHNSHVTIDVLKYAMAHNIILFELPSHSSHITQPLDVCAFGIFKCNITDILGIWAREHGLKMPQE 528
G PQG K+ K + QK R+NSREN T+V T+ A G P IIFKG+R+QP W E GP + Y + MQ +++++Y+K FH+ GL+D KP +L+ DGH SHV+++V++ AM NI+LF+LPSH+SHITQPLDV AFG FK +T +L + R G +PQ+
Sbjct: 411 GTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQK 587
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Match: A0A6H5KC91_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC91_9PHAE) HSP 1 Score: 159 bits (402), Expect = 5.540e-44 Identity = 82/165 (49.70%), Postives = 106/165 (64.24%), Query Frame = 1
Query: 31 KVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIFKGERVQPAWVMEP-GPEGSLYGTKEPPMMQWSLYLRYIKKFHKFTVDSGLVDSKPQVLIFDGHNSHVTIDVLKYAMAHNIILFELPSHSSHITQPLDVCAFGIFKCNITDILGIWAREHGLKMP 522
KV AE QK RSNSREN TVV T+ A G P IIFKG+R+QP W E GP+ + Y + MQ +++ Y+K FHK D G++D KP +L+ DGH SHV+ +V+K AM NIILF+LPS +SHITQPLDV AFG FK +T +L + +G +P
Sbjct: 2 KVFAEAGQKVVESMRSNSRENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFINYLKDFHKQLDDRGVLDRKPHILVLDGHASHVSYEVIKLAMELNIILFQLPSRTSHITQPLDVVAFGTFKKEVTKVLQDYCHANGGLLP 166
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Match: A0A6H5KNQ5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ5_9PHAE) HSP 1 Score: 159 bits (402), Expect = 1.170e-43 Identity = 81/165 (49.09%), Postives = 110/165 (66.67%), Query Frame = 1
Query: 19 FKSKKVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIFKGERVQPAWVMEP-GPEGSLYGTKEPPMMQWSLYLRYIKKFHKFTVDSGLVDSKPQVLIFDGHNSHVTIDVLKYAMAHNIILFELPSHSSHITQPLDVCAFGIFKCNITDILGIWAREHG 510
++++ AE QK G RSNSREN TVVAT+ A G P IIFKG+R+Q W +E GPEG+ Y + Q ++++ Y+K FHK D GL+D KP +L+ DGH SHV+++V++ AM IILF+LPSH+SHITQPLDV AFG FK ++T +L + G
Sbjct: 145 IRTRQAFAESGQKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSFFTQENVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLSSFYHNSG 309 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2847.7763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2847.7763.1 >prot_H-paniculata_contig2847.7763.1 ID=prot_H-paniculata_contig2847.7763.1|Name=mRNA_H-paniculata_contig2847.7763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp GINPQGFKSKKVIAEKRQKTTGVKRSNSRENVTVVATVGAAGVAMPPAIIback to top mRNA from alignment at H-paniculata_contig2847:3669..4199+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2847.7763.1 ID=mRNA_H-paniculata_contig2847.7763.1|Name=mRNA_H-paniculata_contig2847.7763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=531bp|location=Sequence derived from alignment at H-paniculata_contig2847:3669..4199+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2847:3669..4199+ >mRNA_H-paniculata_contig2847.7763.1 ID=mRNA_H-paniculata_contig2847.7763.1|Name=mRNA_H-paniculata_contig2847.7763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at H-paniculata_contig2847:3669..4199+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |