mRNA_H-paniculata_contig11220.776.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11220.776.1
Unique NamemRNA_H-paniculata_contig11220.776.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 4.410e-125
Identity = 221/280 (78.93%), Postives = 244/280 (87.14%), Query Frame = 1 
Query:    1 VGDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGSTVNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAPVVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSLAADPFLFALLTAVAVTVVACPXXLGXATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVVAYGARNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVPAVAGFQATPGMGISCNLV 840
            VGD LLV+PG+LLPADGVV+SG+STVDESMITGESMPV K AGD VFGSTVNQ+GS  M AQGVGKDTALNQVVRLVQEAQSSKAPIQAFADR+SSIFAPVVLS+A   F+ WY +LS+ PRP WLG +LA P   S A DPFLFALLTAVAVTVVA  XX  X TPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDV++ GA N +DSVLA AA+AEA SEHP+G AIV+A+RARG+S+  PAV GFQ+TPGMG+SC +V
Sbjct:  768 VGDSLLVKPGSLLPADGVVVSGNSTVDESMITGESMPVTKAAGDLVFGSTVNQMGSFTMLAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRMSSIFAPVVLSMAMVSFVSWYALLSQDPRPTWLG-KLADPPVGSTATDPFLFALLTAVAVTVVAXXXXXXXXTPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVLSQGAANTKDSVLALAASAEASSEHPVGTAIVEASRARGVSKLEPAVEGFQSTPGMGVSCTIV 1046
[Close]
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Match: A0A5E4HXX6_9ARCH (Putative copper-exporting P-type ATPase A n=1 Tax=uncultured archaeon TaxID=115547 RepID=A0A5E4HXX6_9ARCH)

HSP 1 Score: 265 bits (676), Expect = 8.060e-80
Identity = 145/279 (51.97%), Postives = 197/279 (70.61%), Query Frame = 1 
Query:    1 VGDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGSTVNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAPVVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSLAADPFLFALLTAVAVTVVACPXXLGXATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVVAYGARNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVPAVAGFQATPGMGISCNL 837
            +GD +++RPG  +P DG VLSGDS+VDESM+TGES+PV K  G  V+GSTVN  G+L + A  VG DTAL Q+V+LV++AQ S+APIQ FAD++S++F PVV+ IA   F GWY+ L+      +L   +       L ADPF FALL AV+V V+ACP  LG ATPT++MVG+G+GA+ G+L K   A E  HKV+ ++LDKTGTLT  KP LTD+VA  A+++ +S+L+ AA+ E  SEHP+  AIVQAA+A+GL  ++     F+A PG G+S  +
Sbjct:  233 IGDIMVIRPGEKIPTDGTVLSGDSSVDESMLTGESIPVEKMKGSKVYGSTVNAHGALSVRADKVGSDTALAQIVKLVEDAQGSRAPIQRFADQISAVFVPVVVGIAVLAFGGWYLFLTSGMAAQFLPASI-------LPADPFSFALLAAVSVLVIACPCALGLATPTSIMVGSGIGAQKGILFKSAEALEGTHKVNAIVLDKTGTLTNGKPALTDIVALAAKHNENSILSLAASIEKPSEHPIADAIVQAAQAQGL--KLATAKSFKAHPGHGVSATI 502
[Close]
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Match: A0A7S2RRQ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRQ9_9STRA)

HSP 1 Score: 255 bits (651), Expect = 5.690e-75
Identity = 158/281 (56.23%), Postives = 193/281 (68.68%), Query Frame = 1 
Query:    1 VGDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGSTVNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAPVVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSL--AADPFLFALLTAVAVTVVACPXXLGXATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVVAYGARNDRDS-VLAQAAAAEALSEHPLGRAIVQAARARGLSRQVPAVAGFQATPGMGISCN 834
            VGD + V PGA +PADG V+ G S VDESMITGE+MPV K  G+ V+GST+NQ GS VM A GVG+D+ ++Q+V+LV+EAQ SKAPIQ FADRV+ IF P+VL  A    +GW +V  R     W+         DSL  A+ PFL +LL A++V VVACP  LG ATPTAVMVGTGVGA NG+LIKGG A E AH+V  ++ DKTGTLT  KPTL+D          DS +LA AAA E  SEHP+GRAIV AA++RGL  +  +V  F A PG G+S N
Sbjct:  331 VGDLVRVVPGARVPADGEVVEGKSYVDESMITGEAMPVPKAPGETVYGSTINQTGSFVMRATGVGRDSTISQIVKLVEEAQMSKAPIQDFADRVAGIFVPLVLLGATCTLIGWLLVF-RFGSGAWV---------DSLTDASSPFLASLLFAISVVVVACPCALGLATPTAVMVGTGVGALNGILIKGGEALEVAHQVSILVFDKTGTLTNGKPTLSDSAPLQGSLLTDSQLLALAAAVEQQSEHPVGRAIVAAAQSRGLVLE--SVQDFAAHPGFGVSGN 599
[Close]
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Match: A0A7S6MG02_9BACT (Copper-translocating P-type ATPase n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A7S6MG02_9BACT)

HSP 1 Score: 250 bits (638), Expect = 1.860e-74
Identity = 148/280 (52.86%), Postives = 187/280 (66.79%), Query Frame = 1 
Query:    1 VGDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGSTVNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAPVVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSLAADPFLFALLTAVAVTVVACPXXLGXATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVV-AYGARNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVPAVAGFQATPGMGISCNL 837
            +GDR+LVRPG  +P DG V +G S VDESM+TGES+PV K AGD VFG+T+N  G+L + A  VG DTAL Q+VRLVQEAQ SKAPI   ADR+S +F P+V++IA T F+ W++V                  PDS  +     AL+TAV+V ++ACP  LG ATPTA+MVGTG GA+ G+LIKGG A E AHK+  ++LDKTGT+T  KPT+TDV+ A G   D   +L  AA+AE  SEHPL  AIV+ A ARGL+   P   GFQA  G G+   +
Sbjct:  221 IGDRVLVRPGEKIPVDGTVENGRSAVDESMLTGESVPVEKDAGDSVFGATLNTTGALRLVATKVGADTALQQIVRLVQEAQGSKAPIARLADRISGVFVPIVIAIALTTFIVWWIVSP----------------PDSRLS----MALVTAVSVLIIACPCALGLATPTAIMVGTGRGAEKGILIKGGEALETAHKLTAIVLDKTGTITHGKPTVTDVIPAPGGTLDEHELLRLAASAEQHSEHPLAAAIVREAMARGLALTEPI--GFQALVGHGVEATV 478
[Close]
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Match: A0A3D0CZR3_9CHLR (Heavy metal translocating P-type ATPase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D0CZR3_9CHLR)

HSP 1 Score: 251 bits (642), Expect = 2.950e-74
Identity = 147/274 (53.65%), Postives = 182/274 (66.42%), Query Frame = 1 
Query:    4 GDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGSTVNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAPVVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSLAADPFLFALLTAVAVTVVACPXXLGXATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVVAYGARNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVPAVAGFQATPGMGI 825
            GD LLV+PGA +P DG+VL G S VDESM+TGES+PV K  G P  G T+N+ G+  M A  VGK T L Q++RLV+EAQ SKAPIQ  AD+++SIF PVVL IA   FL W+          +LGP+ A            +FAL+  VAV ++ACP  LG ATPTA+MVGTG GA+ G+LI+GG A E AHK+D ++LDKTGTLT  KP LTDV + G  +D + VL  AA+AE  SEHPL  AIV+ AR+RGL    PA   FQ+  G GI
Sbjct:  330 GDLLLVKPGATVPTDGMVLEGRSAVDESMVTGESLPVEKEPGAPAIGGTINKTGAFKMRATAVGKQTVLAQIIRLVEEAQGSKAPIQRLADQIASIFVPVVLGIATLTFLLWF----------FLGPQPA-----------LVFALVNTVAVLIIACPCALGLATPTAIMVGTGAGAEQGILIRGGEALETAHKIDAIILDKTGTLTRGKPALTDVASNGPGDDAE-VLRLAASAERTSEHPLAEAIVEGARSRGLPLAEPA--RFQSITGQGI 579
[Close]
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Match: A0A853K8B2_9BACL (Uncharacterized protein n=1 Tax=Acidibacillus ferrooxidans TaxID=1765683 RepID=A0A853K8B2_9BACL)

HSP 1 Score: 243 bits (621), Expect = 8.710e-74
Identity = 141/274 (51.46%), Postives = 177/274 (64.60%), Query Frame = 1 
Query:    4 GDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGSTVNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAPVVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSLAADPFLFALLTAVAVTVVACPXXLGXATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVVAYGARNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVPAVAGFQATPGMGI 825
            GD LLVRPG  LP DG++LSG +++DESM+TGESMPV K AG  VFG+T+N+ G+  M A  VG+DTAL Q++R+V EAQ SKAPIQ  AD+VS IF P+VL ++   F+GWY                            F  AL+ AVAV V+ACP  LG ATPTA+MVGTG GA+NG+LIKGG A E AH++  V+LDKTGT+T  +P +TDV A   R     +LA AA+ E  SEHPLG AIV  A+A+GL   +P      A PG G+
Sbjct:   31 GDELLVRPGESLPVDGIILSGRTSIDESMLTGESMPVAKEAGSAVFGATLNKEGAFHMRATKVGRDTALAQIIRMVDEAQGSKAPIQQLADKVSGIFVPIVLVVSLVTFIGWYFAAG------------------------FTHALINAVAVLVIACPCSLGLATPTAIMVGTGKGAENGILIKGGEALEQAHRLTAVILDKTGTITSGRPEVTDVAALSDRVWERDLLALAASVERESEHPLGAAIVSHAQAQGLI--LPTAKDTTAIPGYGV 278
[Close]
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Match: A0A7Y8L6A4_9DELT (Copper-translocating P-type ATPase n=1 Tax=Syntrophaceae bacterium TaxID=2052184 RepID=A0A7Y8L6A4_9DELT)

HSP 1 Score: 250 bits (638), Expect = 1.110e-73
Identity = 149/279 (53.41%), Postives = 183/279 (65.59%), Query Frame = 1 
Query:    4 GDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGSTVNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAPVVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSLAADPFLFALLTAVAVTVVACPXXLGXATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVVAYGARNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVPAVA-GFQATPGMGISCNL 837
            GD +++RPG  +  DG+V  G S VDESM+TGES+PV K  GDPV G T+N+ GS   EA  VGK+TAL Q++RLV+EAQ SKAPIQ  ADRV+S+F P V+SIA   F  W V           GP+ A           F  ALL  VAV ++ACP  LG ATPTA+MVGTG GA+NG+L KGG + E  H+V+T+L DKTGTLT  KPT+TD++A G   D D VL  AA+AE  SEHPLG AIV+AA  RGL    P  A GF+A PG+GI   +
Sbjct:  331 GDWVIIRPGEKIAVDGIVREGSSAVDESMLTGESIPVEKRPGDPVMGGTINKTGSFRFEATKVGKETALAQIIRLVEEAQGSKAPIQRLADRVASVFVPAVISIALITFAVWMV----------FGPQPA-----------FTLALLNFVAVLIIACPCALGLATPTAIMVGTGRGAENGILFKGGESLENIHRVNTILFDKTGTLTHGKPTVTDLIA-GKGFDEDQVLTWAASAEKGSEHPLGEAIVRAAEERGLE---PGTAEGFEALPGLGIKARV 584
[Close]
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Match: A0A101XSW6_9BACL (HMA domain-containing protein n=2 Tax=Acidibacillus ferrooxidans TaxID=1765683 RepID=A0A101XSW6_9BACL)

HSP 1 Score: 243 bits (621), Expect = 1.310e-73
Identity = 141/274 (51.46%), Postives = 177/274 (64.60%), Query Frame = 1 
Query:    4 GDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGSTVNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAPVVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSLAADPFLFALLTAVAVTVVACPXXLGXATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVVAYGARNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVPAVAGFQATPGMGI 825
            GD LLVRPG  LP DG++LSG +++DESM+TGESMPV K AG  VFG+T+N+ G+  M A  VG+DTAL Q++R+V EAQ SKAPIQ  AD+VS IF P+VL ++   F+GWY                            F  AL+ AVAV V+ACP  LG ATPTA+MVGTG GA+NG+LIKGG A E AH++  V+LDKTGT+T  +P +TDV A   R     +LA AA+ E  SEHPLG AIV  A+A+GL   +P      A PG G+
Sbjct:  252 GDELLVRPGESLPVDGIILSGRTSIDESMLTGESMPVAKEAGSAVFGATLNKEGAFHMRATKVGRDTALAQIIRMVDEAQGSKAPIQQLADKVSGIFVPIVLVVSLVTFIGWYFAAG------------------------FTHALINAVAVLVIACPCSLGLATPTAIMVGTGKGAENGILIKGGEALEQAHRLTAVILDKTGTITSGRPEVTDVAALSDRVWERDLLALAASVERESEHPLGAAIVSHAQAQGLI--LPTAKDTTAIPGYGV 499
[Close]
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Match: UPI001BC5E7FA (Copper-translocating P-type ATPase n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=UPI001BC5E7FA)

HSP 1 Score: 250 bits (638), Expect = 1.600e-73
Identity = 143/275 (52.00%), Postives = 184/275 (66.91%), Query Frame = 1 
Query:    1 VGDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGSTVNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAPVVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSLAADPFLFALLTAVAVTVVACPXXLGXATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVVAYGARNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVPAVAGFQATPGMGI 825
            VGD ++VRPG  +P DGVV+ G S+VDESM+TGES+PV K  GD V G+T+N+LG+L   A  VG+DTAL Q++RLV++AQ SKAPIQ FADR+SS+F P V++IAF  F  W           +LGP +   A       PF+ ALL A AV V+ACP  LG ATPTA+MVGTG GA+NG+LIK G A E  H+VD ++ DKTGTLT  +P +T+   +    D +  L  +AA E  SEHPL  AIV  A+A GL   +P+V GF+A PG G+
Sbjct:  346 VGDVVIVRPGEKIPVDGVVVEGRSSVDESMLTGESIPVEKHEGDTVIGATMNKLGALRFRATKVGRDTALAQIIRLVEDAQGSKAPIQRFADRISSVFVPAVVAIAFVTFAVWL----------FLGPAMFPGAIGEFT--PFVKALLVATAVLVIACPCALGLATPTAIMVGTGKGAENGILIKSGEALETTHEVDAIIFDKTGTLTYGRPVVTEYEVFSEAFDAEEFLRLSAALERSSEHPLAEAIVAHAKAAGLD--LPSVTGFEAIPGHGV 606
[Close]
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Match: A0A3B0T0C8_9ZZZZ (Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0T0C8_9ZZZZ)

HSP 1 Score: 240 bits (613), Expect = 2.900e-73
Identity = 140/275 (50.91%), Postives = 181/275 (65.82%), Query Frame = 1 
Query:    1 VGDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGSTVNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAPVVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSLAADPFLFALLTAVAVTVVACPXXLGXATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVLLDKTGTLTMNKPTLTDVVAYGARNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVPAVAGFQATPGMGI 825
            VGD ++VRPG  +P DG V+SG S VDESM+TGE +P  K  GD V GST+N+ GS   EA  VGKDT L+Q++++V++AQ SKAPIQ   D+V+  F P V+ +A   F+ WY            GP  A            L+A++T V V V+ACP  LG ATPT++MVG G GA+NG+LIK G A E AH++ TV+LDKTGT+TM KP+LTDV+A G+  D D++L  AA+AE +SEHPLG AIV  A+ RGL+   P    F ATPG GI
Sbjct:  101 VGDVIVVRPGEKIPVDGRVVSGASAVDESMVTGEPIPTEKTEGDTVIGSTINKTGSFRFEATRVGKDTMLSQIIQMVRDAQGSKAPIQRTVDKVAGYFVPAVMIVAVLTFMTWYT----------FGPSPA-----------LLYAVITTVTVLVIACPCALGLATPTSLMVGIGKGAENGILIKSGDALETAHRITTVVLDKTGTVTMGKPSLTDVIALGSV-DEDTLLVLAASAEKVSEHPLGEAIVAGAKDRGLTLSEPET--FLATPGHGI 351
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11220.776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTL7_ECTSI4.410e-12578.93Heavy metal translocating P-type ATPase n=2 Tax=Ec... [more]
A0A5E4HXX6_9ARCH8.060e-8051.97Putative copper-exporting P-type ATPase A n=1 Tax=... [more]
A0A7S2RRQ9_9STRA5.690e-7556.23Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S6MG02_9BACT1.860e-7452.86Copper-translocating P-type ATPase n=1 Tax=Phycisp... [more]
A0A3D0CZR3_9CHLR2.950e-7453.65Heavy metal translocating P-type ATPase n=1 Tax=Ch... [more]
A0A853K8B2_9BACL8.710e-7451.46Uncharacterized protein n=1 Tax=Acidibacillus ferr... [more]
A0A7Y8L6A4_9DELT1.110e-7353.41Copper-translocating P-type ATPase n=1 Tax=Syntrop... [more]
A0A101XSW6_9BACL1.310e-7351.46HMA domain-containing protein n=2 Tax=Acidibacillu... [more]
UPI001BC5E7FA1.600e-7352.00Copper-translocating P-type ATPase n=1 Tax=Clostri... [more]
A0A3B0T0C8_9ZZZZ2.900e-7350.91Lead, cadmium, zinc and mercury transporting ATPas... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11220contigH-paniculata_contig11220:1252..7526 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score403.3
Seed ortholog evalue9.3e-110
Seed eggNOG ortholog2880.D8LTL7
KEGG rclassRC00002
KEGG koko:K17686
KEGG TC3.A.3.5
KEGG ReactionR00086
KEGG Pathwayko01524,ko04016,map01524,map04016
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cation-transporting ATPase activity
EggNOG OGsCOG2217@1,KOG0207@2759
EC3.6.3.54
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size840
Cds size840
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11220.776.1prot_H-paniculata_contig11220.776.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11220 1252..7526 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928826.2284012-CDS-H-paniculata_contig11220:1251..14311622928826.2284012-CDS-H-paniculata_contig11220:1251..1431Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 1252..1431 -
1691480635.6245325-CDS-H-paniculata_contig11220:1251..14311691480635.6245325-CDS-H-paniculata_contig11220:1251..1431Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 1252..1431 -
1622928826.2440188-CDS-H-paniculata_contig11220:2092..21671622928826.2440188-CDS-H-paniculata_contig11220:2092..2167Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 2093..2167 -
1691480635.6374567-CDS-H-paniculata_contig11220:2092..21671691480635.6374567-CDS-H-paniculata_contig11220:2092..2167Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 2093..2167 -
1622928826.2574296-CDS-H-paniculata_contig11220:3321..35681622928826.2574296-CDS-H-paniculata_contig11220:3321..3568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 3322..3568 -
1691480635.6467578-CDS-H-paniculata_contig11220:3321..35681691480635.6467578-CDS-H-paniculata_contig11220:3321..3568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 3322..3568 -
1622928826.2693408-CDS-H-paniculata_contig11220:4548..46521622928826.2693408-CDS-H-paniculata_contig11220:4548..4652Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 4549..4652 -
1691480635.6569374-CDS-H-paniculata_contig11220:4548..46521691480635.6569374-CDS-H-paniculata_contig11220:4548..4652Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 4549..4652 -
1622928826.2834454-CDS-H-paniculata_contig11220:5462..56061622928826.2834454-CDS-H-paniculata_contig11220:5462..5606Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 5463..5606 -
1691480635.6669056-CDS-H-paniculata_contig11220:5462..56061691480635.6669056-CDS-H-paniculata_contig11220:5462..5606Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 5463..5606 -
1622928826.2965417-CDS-H-paniculata_contig11220:7436..75261622928826.2965417-CDS-H-paniculata_contig11220:7436..7526Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 7437..7526 -
1691480635.6763096-CDS-H-paniculata_contig11220:7436..75261691480635.6763096-CDS-H-paniculata_contig11220:7436..7526Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11220 7437..7526 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11220.776.1

>prot_H-paniculata_contig11220.776.1 ID=prot_H-paniculata_contig11220.776.1|Name=mRNA_H-paniculata_contig11220.776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp
VGDRLLVRPGALLPADGVVLSGDSTVDESMITGESMPVRKGAGDPVFGST
VNQLGSLVMEAQGVGKDTALNQVVRLVQEAQSSKAPIQAFADRVSSIFAP
VVLSIAFTFFLGWYVVLSRIPRPNWLGPELATPAPDSLAADPFLFALLTA
VAVTVVACPCALGLATPTAVMVGTGVGAKNGVLIKGGAAFEAAHKVDTVL
LDKTGTLTMNKPTLTDVVAYGARNDRDSVLAQAAAAEALSEHPLGRAIVQ
AARARGLSRQVPAVAGFQATPGMGISCNLV
back to top

mRNA from alignment at H-paniculata_contig11220:1252..7526-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11220.776.1 ID=mRNA_H-paniculata_contig11220.776.1|Name=mRNA_H-paniculata_contig11220.776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6275bp|location=Sequence derived from alignment at H-paniculata_contig11220:1252..7526- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGGCGACCGGCTTTTGGTGAGGCCCGGGGCTCTTCTACCCGCCGACGG
GGTTGTGTTGTCCGGCGACAGCACTGTGGACGAGAGTATGGTAAGGGAGT
GTGTTGTAGTTGTGATAAGAATGTTTTCTAGAGCTAACCACGAGGGCAGC
GAGTCAGCGTGTGCGTGGTTTATTCATTAGGAGTATTTCGTTGGGCAACA
GCCTGCTTGTCTATTCACTTGTTTGGGGGTAAAGGGTCCCCCGGGTGTCG
TCGTTCATTTCAGTGTTTGAGTTAAAGTGACATTTGAAACACGATGTGCC
ATGTGTAAAGGGAGATGTCTGTTTTTTTTTTATATACTGATATCATCTTA
AGGAGCCCAAAGTACAATCGGCGGATATTAGTAGGTAGCCTACTTGCAGT
GGTGGCTAGTCAAACGAGCCAGACATTTGCCTTCTCTTTGGCTCGTCTGT
ATGTGTGTGGAAAGTGCAGAGGACTTTTCTGACGTCTCTGAACCCCCATC
TCATACACAGCGTCATCCTCCATCCAGCGGCATTTTGGCCTCATGTCGGA
ACATCTTCCTTGTCAACTATCTCCGACGACCTCCAGGAGATCGCTCCTTT
TGGTGAAGTCTACTTTCAAGTAGAGAGATGATGTACCCTAACCTGGGATC
AAGACCCGAGTCCGAGCGTAACTCCGCGGGAGCCGGTCACACCTCAAAAG
GATAAAGGTCGATGAGGGTCGATGAAGACCGCTATAGTTTTTCAATTCGA
TACTAGTCTTGATAGTGTACCAAATCGACTTATGAAAGTGAATCTTGACG
GAAAGTTCAGGGGGTTTATCACCGGACCACGGGCGGAACCGGGATTGGGA
CATACAAAGTTGTATCGGGAGGGGACGGGACGGGACGGGATGCAAGGGGT
TGAAATGTCAACGGAACGAGACCCTGTCCTCGAAATCCCCACTGGGATAT
GACAGCCTCCAAGATACTTAGTGCGCTCCAAACCCTGATCGAACCGATAG
CTAGCCGAGTAGTAGTGAGATTTTTTTTTTCACATACTTTCGGTGAGTAT
CCTACCCTCCGGAAAAAAATACGAATAGTTGCAAATGGCTTTCACAAAAA
CTGGAAGTATTTCACCTGACTTTGAGAATGAGCTCGAGTATTATATGTGC
CCCTGGACCATCCACGACTGCTAATTAAACTCGGAAATCGAACGGACAGG
GGTTGGTATCTTATGTTTTGTGTCCGCTCATTCCGAAACTCAGGCGAATA
CTTTTCAGTTTGTTTTTAGAACCATTTGCAAGTGTTCGGATCTGTCCGGG
GGGTGGAGTGTTCCACATATACAAGGAGCGACTATTCGTCTGAACCGGCT
AGAATAAATGAGACCCCTTAACCGTCATCGAAAGCGAAGCTCCTTGTTTC
TGTGATCCTGTTTGCACTTTTTCGCTCTCAGATGGTGTGCATGCATGAAT
GTTGTATGTTACAGTCGATCCCTTCTTCAACTCGACACCTGTCGGGGGTC
GGGATTTTGAGTGTCAAGGGGGGTACCACCGCCTGATCAATCATCTCAGA
CGACTCAGTGGCGGTTGTGTGCGTGTGTGTGGTATGCATGCATGAATCTC
CACAAATTATTCTACTTTCTGAGCATAGAGTTTGGTCTTCAAAGGGTGTC
AAGTGCTATGTGCTATGAAGGAGGCGTTTTTTTAACTAGGAAATGAAAAA
ACTTGTTGATCTGAGGTGTGAAATATAACAAGTAGTGTTCTCATATGTTG
GATGAGTTTTTTTTTCCATGTATATGTTTAGAGGTCTATCTTCTTCATGT
TCGCGTGACATCCTAGAGGAGCAAGAAAAGCCTCTATTTTTTACCAAAAC
AAGTGTTTTTGTGTGTGTGGGGGGGGATAGTGGTTGGTGAAGTAACATTT
TACGGTTTGTAATTTTCCAGATCACCGGAGAGAGCATGCCGGTGAGGAAA
GGAGCTGGCGATCCTGTGTTCGGGTCCACTGTCAACCAGCTGGGCTCCCT
GGTTATGGAAGCTCAAGGAGTGGGCAAGGACACCGCCTTGAACCAGGTCG
TCAGGCTCGTGCAGGTGATGCGATGTGATGCGATGCAGCTCCCCGTCGTG
TAACCGTTATGACTCGCTGTCACTAGAGGACGTTTGACGTTTGAGATCTT
GTTGATGTTTGGATCATGAACGGGTTTGCTCTTGTTTTGTTTTCAAACTT
TTGAGTGGTGTTTTATGTCCTCGTCTGCTGTGGTTTGGTGTGTCTAATGT
ATGTATATTTCATTGTACTATGTTCTATTGTGTTTAGTTCTGTTCTGTTC
TGTTCTCTATTTTGTGTTGTGTTCTGTTCTATTCTCTTATCTGCGTTCGT
GCCGTATTATGATACATAAAATAAAGCCTAATAACATGTTTTTATTGTCT
TCAGTTCTGTTTCTATTGTGTTTTGTTATGTTTTCGTGTGTTGTTCGATT
TTGCGTGATCTTGTGTCGTGTTATGATCCATGAAATAATCACCTAATCAA
CATGTGAGCAAAATTTAACGTGTGACTAGTTCAGGCGGCGTTGCAAGTCA
ACTTCGTACTATCGTTTTTAGATTCAAATCTGCTACGCGTCGCGGGCGTT
TTTACCTCTTACCTGTATCTGTAATATTGAGGCCTGTGCTGTACCTTGTT
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTATTTCTTGTATTTTT
GCGTTATGTTCTGTATGTTCTGTTCTATTATATTCTGTGTCAAGCTGTGT
CGTGCTGTGTCATCCTCTGCTGCTTTTTGCTCTACTGTGGAATTCGCCGC
CACATACCTTCCTTCAACCTGATCCGACCTCTGTGTTGTGTTTGTTTCGG
GGGTCGCCTTTCATGGTTTTGAAGGAGGCGCAATCATCGAAAGCCCCAAT
CCAGGCTTTTGCGGATAGGGTGTCGAGCATCTTCGCTCCCGTGGTACTTT
CCATCGCTTTCACGTTCTTTCTCGGCTGGTGAGTGAGTTTCTATGACTCC
CAAAACAAATTACATTTTCAAGTGATTTGATTTTCTCAAAAGTGCTTGTT
TCGTAACAGTTTTTCGACTCTTGGAACTCAATTCACCACGCGGGGGTAGA
TAGGATGAGTACCCCAAATTCAGGCGGAACGAGATTTTCAAGGCTGGTCA
AGTTGACCTGTCATCAAAACCAAAAAATCCTGTTTATTTCCTGTCATGAA
CCCTATAATCAACTCCGGGCTGATTTTAGGGTGTAAAAAAACAACGTGAC
TGTGGAGAGCGAGCTCCGGACGTTCCCGAGATTCCTTAATACTGGTCCCC
TGCACAATATTCGGAGGCGTTTCTGCTCATTTTCGGACCAGGTCTCGAGC
GGTTCTGTCCACTCTCGGACCAGCTATTTAGCTGATTCGTCACTCCTGCC
CAGGAATGGTCTCCCACGATAAATTAATACAAAGTGTGTTCTCCATATTA
CATCCTTGAACCTAGACCGAAACTAGACCAGAGCAGCGTGCCCATGGAAG
CCAGTCTACCGGGGGAGTGTGGCATTCTCGTAGCTTTATCAATTATGACG
GTTGGCGTGAACTAAACATTTTATTATTCACGTGTGCGCCTATGAAATGT
GCCCGTTTTTTCTTGTTCGTTTGCACGTGGTTTCATTGGTGGGAGGAATT
CTGTTTTTTGGCGAAGTTTGGGTGGAGTGGAATGAAATCGCAGTCTTGGT
CAGATACCACCATGATGGTCTCCAGGCCAGAACTCAACGAGGAGAACGAT
ATTTATGCATCTCTGCTTCTTGGTTTGACTTGCCCCTCACTATTGGTAGG
GTACTCTTCACAAGCGCTATTTTCATAGTGAACATGCCGTCCTGCTGGTG
AAGCTATTGTTAGTACTTGATGCGTGTGGTGATGTGGCTACCCCTCTGCC
CCCTCCGCCCCCCCCGCCCCCCCCACACTTCCTCTCCTGTTCTCCGACTG
AATACCAGGTACGTCGTCCTGTCCCGCATCCCCCGACCCAATTGGCTCGG
TCCCGAGCTCGCAACGCCGGCCCCGGATAGCCTGGCGGCAGATCCCTTTC
TGTTTGCACTGCTTACGGCCGTGGCCGTGACGGTGGTCGCGTGTCCTTGC
GCGCTGGGGTTGGCGACGCCCACGGCTGTTATGGTGGGGACTGGGGTCGG
CGCGAAGAACGGGGTGCTGATCAAGGGTGGCGCGGCGTTTGAAGCTGCTC
ACAAGGTTAAAAATGTTTAGTATAGTAGTAGTAGTAGTAGTAGTAAAAAC
AATCTTCTTTTTTATTTTTTTCACGTTATTTTTTTACTTTGTTTTAAAAA
GATGAGGGATGGGGATGGAGATGGGGCGGGGGGGCGGGGGGTCTTCATTT
ACGGTGAAATCTGGAGGTATTGCACCGGGGTGCGGCAGTTTTTGAAACGC
GAATATTATGTGGAGAACGGAGACAGGCCTTACGTGGTCGAAAGAAGTCG
TCGAACGGCAGTTGGATGGGATATCCGGAACATTTTTTCGACAGCGGACT
TTTCGTTTTCAGTCGCTGATGCCGTAGTCATCGAATAAATCGCCTTTGAA
GAAGTCTTCGCATTCTCGTATTGTGATACCCACCTTTCGTTTTTTAGTGC
CTCACATGATTTTTACTGTTGTGGTTGTTGGGGGTGTTTCTCTTGTTGTA
CGGGTTGTACGTTGGTGCGACCGCAGAAGTGGTATCGACTGCGGCAATGC
CGTATCCGTTTTTTTTTCGAAGCTTACTGCCTTGCCTCCCCTTTTTTGGG
AGTTTTTTTTCATGTAGTGAAATGTCGATAAGTGGCCACTGTTGGCATGT
GAAAGTGTTTCAGGTATACCCTTTCAGATTTCGTCTCTTGCAGCTGTAGT
ATCTTTTTCTCTAATCTCACAAGCCTGTATTTTGTTTTTTGTACTTGATT
GCTCGAAAAGGGACTTGTCTGTCTCAAGTGTTGTAAAGTCATCACCTTGG
AAACGAAAAGTTATTTCAACAGGCACCGTAGATAAGGTATGGCATCCGGT
GTACCCCGGGTATTTACGCCGGTATTTGATACAGTGGTACGCGTGGGTAC
TGTAGGTATGACGTTCGAAAATACCGTGATATGCATGGGTAACCATAGGT
ATGACATTCGAGAATACCAGGATGGACCGGTACCAAAAAGATATCACATA
TCCAAAATAGCAGTACCGGGTACCAACCTTACCTACGGTGCCTGTGGTTC
TTTCCTAAATTATTGTTACCAGGACGCGATTTTGTTGATCCCTACGACAC
TGGGTCTATGAATCATTTTTCTTTCGCACATGGTCTTTTCGTTTTTTCCC
AGTTACTTATAAGGCGAATTTCTTCTCTATCCCCCCTTTTTCGGCTGGTG
TGTGAACAGGTGGACACGGTACTGCTGGACAAAACCGGGACTCTGACAAT
GAACAAGCCAACTCTCACGGACGTGGTGGCATACGTAGGTTTGCGTGCGT
GCTTGCGTGCAACACGACCACATCGATTTGCAGCAGAAAATTGTGTATCT
GTGTCAGTCTTACTGCGTTGGGCGTGCCGGGTTGCTCCGTAAGTTTTGTC
TGATGACCCAGATGGCTGTATACAAAAACACATTTTATTATGATGTATAG
ATATGCGTGATTTAGGTGAACACCCACACCGAGAAAACAGGGTTTGTGAA
AACAAGAAATCACTTGGTAAGTTTTACGTCGCTCCATTGCCTCACCCGGC
AGTCACCAACTATGATGATGATGATGATGATGATGATATTCTGAGGGAAC
CCTAAATACAGTACGTTACTGGCCTGATGTTAAGACTTGAAGTGGCGAGG
GTGTCTGAGCCACTGGCTCACTTGCCTACAGGCTTACTTACTAGTAGTCA
AGACAAACTTAAGCATAGATAAATGCCAACGCGTCATATGATCTAGCATG
TACGTACCCTCACACAGGGTGCGCGTAACAATGACAATGATGATAACGAC
GGTGTTCGGAAGGGAGTCTAACTAAAAGACTCTTCTGACATACTCGCTCC
CTGGCTCACTATCTTTATCTTCATTCGTTAAGCAAAATGACGCTTGAACG
CGAATGCTTCGTCTATCTACCGTATGCATGCTGTCTATCATACAGGGTGC
GCGCAATGACCGGGACTCGGTCTTGGCGCAAGCGGCCGCGGCGGAGGCGT
TGAGCGAGCACCCCCTCGGTAGAGCTATCGTCCAGGCGGCGCGCGCACGT
GGATTGTCTCGGCAAGTCCCTGCCGTCGCCGGTTTTCAGGCGACTCCTGG
GATGGGCATTTCGTGCAATCTAGTG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig11220:1252..7526-

>mRNA_H-paniculata_contig11220.776.1 ID=mRNA_H-paniculata_contig11220.776.1|Name=mRNA_H-paniculata_contig11220.776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1680bp|location=Sequence derived from alignment at H-paniculata_contig11220:1252..7526- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGGCGACCGGCTTTTGGTGAGGCCCGGGGCTCTTCTACCCGCCGACGG
GGTTGTGTTGTCCGGCGACAGCACTGTGGACGAGAGTATGGTTGGCGACC
GGCTTTTGGTGAGGCCCGGGGCTCTTCTACCCGCCGACGGGGTTGTGTTG
TCCGGCGACAGCACTGTGGACGAGAGTATGATCACCGGAGAGAGCATGCC
GGTGAGGAAAGGAGCTGGCGATCCTGTGTTCGGGTCCACTGTCAACCAGC
TGGGCTCCCTGGTTATGGAAGCTCAAGGAGTGGGCAAGGACACCGCCTTG
AACCAGGTCGTCAGGCTCGTGCAGATCACCGGAGAGAGCATGCCGGTGAG
GAAAGGAGCTGGCGATCCTGTGTTCGGGTCCACTGTCAACCAGCTGGGCT
CCCTGGTTATGGAAGCTCAAGGAGTGGGCAAGGACACCGCCTTGAACCAG
GTCGTCAGGCTCGTGCAGGAGGCGCAATCATCGAAAGCCCCAATCCAGGC
TTTTGCGGATAGGGTGTCGAGCATCTTCGCTCCCGTGGTACTTTCCATCG
CTTTCACGTTCTTTCTCGGCTGGAGGCGCAATCATCGAAAGCCCCAATCC
AGGCTTTTGCGGATAGGGTGTCGAGCATCTTCGCTCCCGTGGTACTTTCC
ATCGCTTTCACGTTCTTTCTCGGCTGGTACGTCGTCCTGTCCCGCATCCC
CCGACCCAATTGGCTCGGTCCCGAGCTCGCAACGCCGGCCCCGGATAGCC
TGGCGGCAGATCCCTTTCTGTTTGCACTGCTTACGGCCGTGGCCGTGACG
GTGGTCGCGTGTCCTTGCGCGCTGGGGTTGGCGACGCCCACGGCTGTTAT
GGTGGGGACTGGGGTCGGCGCGAAGAACGGGGTGCTGATCAAGGGTGGCG
CGGCGTTTGAAGCTGCTCACAAGGTACGTCGTCCTGTCCCGCATCCCCCG
ACCCAATTGGCTCGGTCCCGAGCTCGCAACGCCGGCCCCGGATAGCCTGG
CGGCAGATCCCTTTCTGTTTGCACTGCTTACGGCCGTGGCCGTGACGGTG
GTCGCGTGTCCTTGCGCGCTGGGGTTGGCGACGCCCACGGCTGTTATGGT
GGGGACTGGGGTCGGCGCGAAGAACGGGGTGCTGATCAAGGGTGGCGCGG
CGTTTGAAGCTGCTCACAAGGTGGACACGGTACTGCTGGACAAAACCGGG
ACTCTGACAATGAACAAGCCAACTCTCACGGACGTGGTGGCATACGTGGA
CACGGTACTGCTGGACAAAACCGGGACTCTGACAATGAACAAGCCAACTC
TCACGGACGTGGTGGCATACGGTGCGCGCAATGACCGGGACTCGGTCTTG
GCGCAAGCGGCCGCGGCGGAGGCGTTGAGCGAGCACCCCCTCGGTAGAGC
TATCGTCCAGGCGGCGCGCGCACGTGGATTGTCTCGGCAAGTCCCTGCCG
TCGCCGGTTTTCAGGCGACTCCTGGGATGGGCATTTCGTGCAATCTAGTG
GGTGCGCGCAATGACCGGGACTCGGTCTTGGCGCAAGCGGCCGCGGCGGA
GGCGTTGAGCGAGCACCCCCTCGGTAGAGCTATCGTCCAGGCGGCGCGCG
CACGTGGATTGTCTCGGCAAGTCCCTGCCGTCGCCGGTTTTCAGGCGACT
CCTGGGATGGGCATTTCGTGCAATCTAGTG
back to top