prot_H-paniculata_contig2842.7757.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2842.7757.1
Unique Nameprot_H-paniculata_contig2842.7757.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
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BLAST of mRNA_H-paniculata_contig2842.7757.1 vs. uniprot
Match: D7FRB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRB4_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.990e-30
Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 0 
Query:    1 MQIFADCSTDNVGISAVWSAFVGFLFLGQRKMRDTVWKG---DASHLATVFSLVLWTGVCVYYAIVEEFMTTVAHIVAFGVGAGALLIFSWVHQL 92
            MQ+FADCST+NVGISAVWSA+ GF+FL   +++    +     A   AT  SL +WTGVCVYYAIVEE MTTVAH+VAFGVGAGALL+F  +H++
Sbjct:   66 MQLFADCSTNNVGISAVWSAYAGFVFLAWWRIQHIRAENAAVSALAYATPVSLAMWTGVCVYYAIVEEAMTTVAHLVAFGVGAGALLLFEALHKI 160
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BLAST of mRNA_H-paniculata_contig2842.7757.1 vs. uniprot
Match: A0A835ZC08_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC08_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.100e-13
Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:    1 MQIFADCSTDNVGISAVWSAFVGFLFLGQRKMRDTVWKGDASHLATVFSLVLWTGVCVYYAIVEEFMTTVAHIVAFGVGAGALLIFSWVHQLQCSSPGDD 100
            +QI ADC  D  GISAVW+A  GFL +G R M   +++   + LAT  +L    G+ VYYA+VE+ +T+VAH VAFGVG     +     Q+   + GDD
Sbjct:   64 LQIGADCGADAEGISAVWAAQAGFLAVGWRLM-PAMYRPRPARLATAAALSTALGLTVYYAMVEDAITSVAHAVAFGVGCALSRLHRRFFQIH-DAGGDD 161
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2842.7757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRB4_ECTSI1.990e-3062.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC08_9STRA1.100e-1344.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 12..29
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 44..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2842contigH-paniculata_contig2842:15814..17434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2842.7757.1mRNA_H-paniculata_contig2842.7757.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2842 15117..17562 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2842.7757.1 ID=prot_H-paniculata_contig2842.7757.1|Name=mRNA_H-paniculata_contig2842.7757.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
MQIFADCSTDNVGISAVWSAFVGFLFLGQRKMRDTVWKGDASHLATVFSL
VLWTGVCVYYAIVEEFMTTVAHIVAFGVGAGALLIFSWVHQLQCSSPGDD
MPRVAYQGVN*
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