prot_H-paniculata_contig2841.7753.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2841.7753.1
Unique Nameprot_H-paniculata_contig2841.7753.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length291
Homology
BLAST of mRNA_H-paniculata_contig2841.7753.1 vs. uniprot
Match: D8LFR7_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFR7_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 9.250e-72
Identity = 138/285 (48.42%), Postives = 185/285 (64.91%), Query Frame = 0
Query:    9 WMVATLVSVVGSARRSLA-WSSGPR--AVQLM-PAQGAL-AVESKGSTATARSRYKVEQPHIYSDFNGLKVCVWVDSTPSGEQQSSRSGPFCFDKEEEDLPIEGLDVGSHRLSAAVVAPGDPVIGRKSRLLSPVADTIFEVVLHEEFAATYTWQDVQEWQSLPAGLEIVLPLDGLGKKRARIPPVWQLQKYV-ELSGDDGRTSKGETAVAEKLSGFFVRVNVRPETTVLELRREIARHPRLAGQRIGRVKLLLGGRLLNDLETLVSLDLFNRLRDFAVVVDPMGG 287
            WM+  + S+  S RR++A +++G    AV+L+ PA+G +  V ++ + A+A S Y+V Q  + + F+GL+VCVWVDS   G+  +SRSGPFCF+  +++LPI GL+VGSHRLSAAVVAP        ++ +S V      VVL E+FA +Y WQ V  WQS+P GLE+ LPLDG+G+KRAR+PP W+LQ YV E SG                 GFFVR ++R  +TVLELRREIAR PR  G  + RV+L LGGR+L D ET   LDLFNR R+   +VD   G
Sbjct:    8 WMI--VASLSQSFRRNMASYAAGTTRYAVRLVAPAEGPVFGVATRNAKASAVSAYEVLQEPVGAPFDGLQVCVWVDSMIEGKDTASRSGPFCFEGLQQELPINGLEVGSHRLSAAVVAPTQD---GPTQQISEVTTAQINVVLQEDFAPSYKWQQVYPWQSVPPGLEVQLPLDGVGQKRARVPPSWRLQLYVPEESG----------------GGFFVRTDLRAGSTVLELRREIARQPRFGGGGVERVRLSLGGRVLGDEETAEGLDLFNRQRELVALVDRRPG 271          
BLAST of mRNA_H-paniculata_contig2841.7753.1 vs. uniprot
Match: A0A836CHB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB5_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.450e-34
Identity = 92/242 (38.02%), Postives = 126/242 (52.07%), Query Frame = 0
Query:   48 KGSTATARSRYKVEQPHIYSDFNGLKVCVWVDSTPSGE-QQSSRSGPFCFDKEEEDLPIEGLDVGSHRLSAAVV----APGDPVIGRKSRLLSPVADTIFEVVLHEEFAATYTWQDVQEWQSLPAGLEIVLPLDGLGKKRARIPPVWQLQKYVE---LSGDDGRTSKGETAVAEKLSGFFVRVNVRPETTVLELRREIARHPRLAGQRIGRVKLLLGGRLLNDLETLVSLDLFNRLRDFAVV 281
            +  TA     Y+V +P +      LKVC+W D    G   Q + SGPFCF + +  + ++ L  G H LSAAVV    A G+ ++     L +  A     V +  +FA TY WQ V+EWQ +P GLE+ LPLDG G++ ARIP  WQLQ +V+   L GD                GFF R  +   TTV +LR+ IA H R     +  V + LGG  + D ET+  LDLFNR ++  +V
Sbjct:   44 ENKTAHGVLHYQVSEPWVEQWNPSLKVCIWGDFLDPGTGAQRAASGPFCFAEPQGAVNMQALGAGLHVLSAAVVQDRSADGETML----ELSAERARHTLRVDVKRDFAPTYAWQPVREWQGVPPGLEVRLPLDGSGERTARIPQPWQLQLFVQDPHLPGD----------------GFFFRQQITGGTTVGDLRQAIASH-REVQLPLELVWMTLGGAPVADHETVKELDLFNRQKELKLV 264          
BLAST of mRNA_H-paniculata_contig2841.7753.1 vs. uniprot
Match: A0A6U9D208_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6U9D208_EMIHU)

HSP 1 Score: 67.8 bits (164), Expect = 1.350e-9
Identity = 68/188 (36.17%), Postives = 89/188 (47.34%), Query Frame = 0
Query:  104 PIEG-LDVGSHRLSAAVVAPGDPVIGR------KSRLLSPVADTIFEVVLHEEFAATYTWQDVQEWQSLPAGLEIVLPLDGLGKKRARIPPVWQLQKYVELSGDDGRTSKGETAVAEKLSGFFVRVNVRPETTVLELRREIARHPRLAGQRIGRVKLLLGGRLLND-LETLVSLDLFNRLRDFAVVVD 283
            P++G + V +   +A   A GDP +          R  S VA ++ + V       +Y WQ   +  ++PAGLE+ LPLDG    RARIPP WQL  +V    D+ R             GF+ R  VR ETTV ELR   ARH   AG     V L L G  L+D   T   +DLF R     V+V+
Sbjct:   83 PLDGAVLVFADGAAAEEFAAGDPYVAEGIVETWTVREWSAVAGSLLQHVPPPPPFPSYEWQRFADGVAVPAGLEVELPLDGR-PGRARIPPCWQLDVWV----DEAR-------------GFW-RGEVRRETTVGELRSLAARH---AGCSSEAVTLRLDGAPLDDDAATAEQIDLFGRKGALEVLVE 248          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2841.7753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFR7_ECTSI9.250e-7248.42Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A836CHB5_9STRA1.450e-3438.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U9D208_EMIHU1.350e-936.17Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..290
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.695
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 220..271
score: 10.571
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 215..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2841contigH-paniculata_contig2841:14670..16800 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2841.7753.1mRNA_H-paniculata_contig2841.7753.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2841 14203..16924 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2841.7753.1 ID=prot_H-paniculata_contig2841.7753.1|Name=mRNA_H-paniculata_contig2841.7753.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=291bp
MCMAKLSLWMVATLVSVVGSARRSLAWSSGPRAVQLMPAQGALAVESKGS
TATARSRYKVEQPHIYSDFNGLKVCVWVDSTPSGEQQSSRSGPFCFDKEE
EDLPIEGLDVGSHRLSAAVVAPGDPVIGRKSRLLSPVADTIFEVVLHEEF
AATYTWQDVQEWQSLPAGLEIVLPLDGLGKKRARIPPVWQLQKYVELSGD
DGRTSKGETAVAEKLSGFFVRVNVRPETTVLELRREIARHPRLAGQRIGR
VKLLLGGRLLNDLETLVSLDLFNRLRDFAVVVDPMGGERS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf