prot_H-paniculata_contig284.7749.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig284.7749.1
Unique Nameprot_H-paniculata_contig284.7749.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length199
Homology
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: D8LR95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR95_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 3.260e-46
Identity = 97/202 (48.02%), Postives = 120/202 (59.41%), Query Frame = 0
Query:   10 AEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLR---RAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAP-------------------------AAKEAGLQTEDNEVLCDVSAQEGLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEEGQASAV 183
            A++RRVF+RALEAVGD+P +G LWR CVAFEE QG  R   R    Y  A G RL DLE+LW+  K+F+D  PWGKL  S                                A  +   +  +  ++   SA+EG TD ++KA +V+ L  KRK SLR R RRESFE RI RPHFHVKPLDDAQL+AWS+YLDFE+ QA+  
Sbjct:  175 ADVRRVFERALEAVGDNPGAGPLWRTCVAFEEAQGGRRGPLRVTRLYERAFGHRLKDLEVLWIGFKEFVDGLPWGKLRPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDDAVDDDDFEVAEAALVVASSAEEGSTDADKKAMLVRTLGEKRKASLRGRQRRESFERRISRPHFHVKPLDDAQLLAWSQYLDFEQAQAAGA 376          
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A078G0R1_BRANA (BnaC05g02260D protein n=12 Tax=Brassiceae TaxID=981071 RepID=A0A078G0R1_BRANA)

HSP 1 Score: 75.9 bits (185), Expect = 1.500e-12
Identity = 55/185 (29.73%), Postives = 87/185 (47.03%), Query Frame = 0
Query:    8 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPAAKEAGL--------QTEDNEVLCDVSAQE-------GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 177
            D   IRR+F+RAL  VG    S  LW + + +E  Q D  R  + Y   L   + +L+  + + K+  +  P  +L ++    A  AA +A          + ++ +   D S+++       G TDPE     + + EA    +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  183 DPDTIRRLFERALVYVGTDFLSSPLWDKYIEYECMQQDWSRVANIYTKILENPIQNLDRYFANFKELAETRPLSELRSAEESAAVAAASDASKASPSESDGKADEEKSQADGSSEQSPKLETAGSTDPEELKNYIAIREAMYIKAKEFESKIIGFEMAIRRPYFHVRPLNAAELENWHNYLDFIE 367          
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A8J2P8S4_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2P8S4_9HEXA)

HSP 1 Score: 75.9 bits (185), Expect = 1.500e-12
Identity = 55/170 (32.35%), Postives = 81/170 (47.65%), Query Frame = 0
Query:    8 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMD-RTPWGKLAASAREGAAPAAKEAGLQTEDNEVLCDVSAQEGLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFE 176
            D   +R  FD+A++ VG    S  LW   + +E+  G+LR+    Y   L       +  + +LKDF+    P   L+         A KEA    ED+E     +  +G  D + + ++V+      K +  E   R  FE  I+RP+FHVKPL+  QL  W EYLDFE
Sbjct:  250 DQTYVREQFDKAIQTVGMEFRSDKLWEHYLHYEKESGNLRKLMAIYDQLLATPTQSYQQHFQNLKDFVSANAPQDILSEDEYAEIKDATKEA--PAEDSEEAPAETEAQGDIDAKIRDKIVERRTEVHKKTEEEIVARWPFEEAIKRPYFHVKPLEKGQLKMWKEYLDFE 417          
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A2I4F6F0_JUGRE (pre-mRNA-processing factor 39-like isoform X2 n=28 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4F6F0_JUGRE)

HSP 1 Score: 75.5 bits (184), Expect = 2.050e-12
Identity = 57/177 (32.20%), Postives = 82/177 (46.33%), Query Frame = 0
Query:    8 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKL-AASAREGAAPAAKEAGLQTEDNEVLCDVSAQE------GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 177
            D   IRR+F+R L  VG    S  LW + + +E  Q +  R    Y   L +    L+  +   K+ +   P  ++  A     AA    E G+QT + EV  D + Q       GLT+ E   + + V E   K +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  267 DPDTIRRLFERGLAYVGTDYLSFTLWDKYIEYEYMQQEWGRLAMIYTRILEYPNQQLDRYFTSFKELVGSRPLSEIMTAEEAATAAGGLSEDGVQTNEGEVHPDATEQSPKPVSSGLTEAEELQKYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHSYLDFME 443          
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A6A1VAF0_9ROSI (Pre-mRNA-processing factor 39 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VAF0_9ROSI)

HSP 1 Score: 75.1 bits (183), Expect = 2.790e-12
Identity = 55/175 (31.43%), Postives = 81/175 (46.29%), Query Frame = 0
Query:    8 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPAAKEAGLQTEDNEVLCDVSAQE-----GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 177
            D   +RR+F+R L  VG    S  LW + + +E  Q +  R    Y   L +    L+  +   K+     P  +L  +  E AA A  E  +QT + E   D + Q      GLT+ E   + + + E   K +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  266 DPDTVRRLFERGLAYVGTDYLSFTLWDKYIEYEYMQQEWGRLAMIYTRILEYPNQQLDRYFNSFKELAGSRPLSELRTA--EEAAAALSETSIQTNEGEFRPDATEQSKPVSAGLTEAEELQKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHSYLDFME 438          
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: UPI00106C2C21 (pre-mRNA-processing factor 39-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C2C21)

HSP 1 Score: 74.3 bits (181), Expect = 4.990e-12
Identity = 61/191 (31.94%), Postives = 89/191 (46.60%), Query Frame = 0
Query:   12 IRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGK-------LAASAREGAAP------------AAKEAGLQTEDNEVLCDVSAQEGLT-DPERKARVVKVLEAKRKV----SLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEEG 178
            +R +F+RA+ A G+   S  LW   + +E+ Q  L++    Y   L     +    W   +D ++  P  +       L   A  GAAP            AA E   + E  +   D   ++G   DPE  A   KV+ A+RKV    +  E  +R +FE  I+RP+FHVKPL+  QL  W +YLDFE G
Sbjct:  216 MRSLFERAITAAGEDFRSDKLWDAYIEWEKAQKQLQKVTALYDRVLNVPTQNYSKHWKKFQDHINMNPLEEVLTGEELLKLKAEAGAAPPGFTVDSDPAVGAAPEEEKKVESADTTEDTKGEDGKPEDPEANAIRKKVI-AQRKVIYDANETEVSKRWTFEEGIKRPYFHVKPLEKVQLKNWRDYLDFEVG 405          
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A2I4DL48_JUGRE (pre-mRNA-processing factor 39-like isoform X5 n=46 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4DL48_JUGRE)

HSP 1 Score: 74.3 bits (181), Expect = 5.120e-12
Identity = 56/178 (31.46%), Postives = 81/178 (45.51%), Query Frame = 0
Query:    8 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPAA--KEAGLQTEDNEVLCDVSAQE------GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 177
            D   IRR+F+R L  VG    S  LW + + +E  Q +  R    Y   L +    L+  +   K+     P  +L  +    AA  A   EA +Q  + EV  D + Q       GLT+ E   + + + E   K +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  258 DPETIRRLFERGLAYVGTDYLSFTLWDKYIEYEYMQQEWGRLAMIYTRILEYPNQQLDRYFNSFKELAGSRPLSELRTAEEAAAAXXAALSEASVQANEGEVHPDATEQSPKLVSSGLTEAEELQKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHSYLDFME 435          
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: UPI001CFEBF62 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFEBF62)

HSP 1 Score: 73.9 bits (180), Expect = 6.620e-12
Identity = 54/177 (30.51%), Postives = 86/177 (48.59%), Query Frame = 0
Query:    8 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPAAKEAGLQ-------TEDNEVLCDVSAQEGLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 177
            DV+EIR +F+RAL+++G+   +  LW + + FE  Q +L      Y+ A+     DL L+W   KDFM +T   K  +S+  G+    +E+  Q           E +    A   L D     R    L  K+++     +R   FE  IRRP+FHV+P  + +L  +  Y++ EE
Sbjct:  134 DVSEIRALFERALQSIGNDYYARILWEKYIEFETSQDELENVVKLYKRAIQVPCRDLTLIWSQFKDFM-KTHTPKQESSSTTGSDGKEQESSQQILTVEQYAHTPEEMNAYKASNKLNDLTTYWRENLYLPTKKEL-----ERIRPFEDHIRRPYFHVQPFQEHELEHFRRYIENEE 304          
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A565AMN3_9BRAS (Uncharacterized protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565AMN3_9BRAS)

HSP 1 Score: 73.9 bits (180), Expect = 6.860e-12
Identity = 56/183 (30.60%), Postives = 85/183 (46.45%), Query Frame = 0
Query:    8 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKL------AASAREGAAPAAKEAGLQTEDNEVLCDVSAQE-------GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 177
            D   IRR+F+RAL  VG    S  LW + + +E  Q D  R    Y   L   + + +  +   K+  +  P  +L      AA+A + +  A  E+  + ++ +   D S  +       G TDPE   + + V EA    +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  198 DPDTIRRLFERALVYVGTDFLSSTLWDKYIEYEYMQQDWSRLAMIYTRILENPIQNFDRYFSSFKELAETRPLSELRSAEESAAAAADASESAPSESSGKADEGKSQADGSTDQSPKLESAGSTDPEELKKYIGVREAMYIKAKEFESKIIGFEIAIRRPYFHVRPLNVAELENWHSYLDFVE 380          
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A6P4AYP6_ZIZJJ (pre-mRNA-processing factor 39 isoform X1 n=7 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4AYP6_ZIZJJ)

HSP 1 Score: 73.9 bits (180), Expect = 6.970e-12
Identity = 59/178 (33.15%), Postives = 82/178 (46.07%), Query Frame = 0
Query:    8 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPA--AKEAGLQTEDNEVLCDVSAQE------GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 177
            D   +RR F+R L  VG    S  LW + + +E  Q +  R    Y   L      L+  +   K+     P  +L  SA E AA A  + EAG Q  + EV  D + Q       GLT+ E   + + + E   K +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  266 DPDTVRRFFERGLAYVGTDYLSSSLWDKYIEYEYMQQEWGRLALIYTRILENPNQQLDRYFNSFKELAGNRPLSELK-SAEEAAAAAGTSSEAGDQVNEGEVQPDAADQSPKPVSAGLTEAEELEKYIGIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHNYLDFME 442          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR95_ECTSI3.260e-4648.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A078G0R1_BRANA1.500e-1229.73BnaC05g02260D protein n=12 Tax=Brassiceae TaxID=98... [more]
A0A8J2P8S4_9HEXA1.500e-1232.35Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A2I4F6F0_JUGRE2.050e-1232.20pre-mRNA-processing factor 39-like isoform X2 n=28... [more]
A0A6A1VAF0_9ROSI2.790e-1231.43Pre-mRNA-processing factor 39 n=1 Tax=Morella rubr... [more]
UPI00106C2C214.990e-1231.94pre-mRNA-processing factor 39-like isoform X1 n=2 ... [more]
A0A2I4DL48_JUGRE5.120e-1231.46pre-mRNA-processing factor 39-like isoform X5 n=46... [more]
UPI001CFEBF626.620e-1230.51uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A565AMN3_9BRAS6.860e-1230.60Uncharacterized protein n=1 Tax=Arabis nemorensis ... [more]
A0A6P4AYP6_ZIZJJ6.970e-1233.15pre-mRNA-processing factor 39 isoform X1 n=7 Tax=Z... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR17204:SF5PRE-MRNA-PROCESSING FACTOR 39coord: 8..181
NoneNo IPR availablePANTHERPTHR17204PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDcoord: 8..181
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 9..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig284contigH-paniculata_contig284:36276..42383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig284.7749.1mRNA_H-paniculata_contig284.7749.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig284 36276..42383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig284.7749.1 ID=prot_H-paniculata_contig284.7749.1|Name=mRNA_H-paniculata_contig284.7749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
SGGSINVDVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAF
DHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPAAKEAGL
QTEDNEVLCDVSAQEGLTDPERKARVVKVLEAKRKVSLRERDRRESFECR
IRRPHFHVKPLDDAQLMAWSEYLDFEEGQASAVGGRGGGARKRARDDGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf