mRNA_H-paniculata_contig284.7749.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig284.7749.1
Unique NamemRNA_H-paniculata_contig284.7749.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: D8LR95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR95_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 3.260e-46
Identity = 97/202 (48.02%), Postives = 120/202 (59.41%), Query Frame = 1 
Query:   28 AEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLR---RAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAP-------------------------AAKEAGLQTEDNEVLCDVSAQEGLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEEGQASAV 549
            A++RRVF+RALEAVGD+P +G LWR CVAFEE QG  R   R    Y  A G RL DLE+LW+  K+F+D  PWGKL  S                                A  +   +  +  ++   SA+EG TD ++KA +V+ L  KRK SLR R RRESFE RI RPHFHVKPLDDAQL+AWS+YLDFE+ QA+  
Sbjct:  175 ADVRRVFERALEAVGDNPGAGPLWRTCVAFEEAQGGRRGPLRVTRLYERAFGHRLKDLEVLWIGFKEFVDGLPWGKLRPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDDAVDDDDFEVAEAALVVASSAEEGSTDADKKAMLVRTLGEKRKASLRGRQRRESFERRISRPHFHVKPLDDAQLLAWSQYLDFEQAQAAGA 376
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BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A078G0R1_BRANA (BnaC05g02260D protein n=12 Tax=Brassiceae TaxID=981071 RepID=A0A078G0R1_BRANA)

HSP 1 Score: 75.9 bits (185), Expect = 1.500e-12
Identity = 55/185 (29.73%), Postives = 87/185 (47.03%), Query Frame = 1 
Query:   22 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPAAKEAGL--------QTEDNEVLCDVSAQE-------GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 531
            D   IRR+F+RAL  VG    S  LW + + +E  Q D  R  + Y   L   + +L+  + + K+  +  P  +L ++    A  AA +A          + ++ +   D S+++       G TDPE     + + EA    +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  183 DPDTIRRLFERALVYVGTDFLSSPLWDKYIEYECMQQDWSRVANIYTKILENPIQNLDRYFANFKELAETRPLSELRSAEESAAVAAASDASKASPSESDGKADEEKSQADGSSEQSPKLETAGSTDPEELKNYIAIREAMYIKAKEFESKIIGFEMAIRRPYFHVRPLNAAELENWHNYLDFIE 367
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BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A8J2P8S4_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2P8S4_9HEXA)

HSP 1 Score: 75.9 bits (185), Expect = 1.500e-12
Identity = 55/170 (32.35%), Postives = 81/170 (47.65%), Query Frame = 1 
Query:   22 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMD-RTPWGKLAASAREGAAPAAKEAGLQTEDNEVLCDVSAQEGLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFE 528
            D   +R  FD+A++ VG    S  LW   + +E+  G+LR+    Y   L       +  + +LKDF+    P   L+         A KEA    ED+E     +  +G  D + + ++V+      K +  E   R  FE  I+RP+FHVKPL+  QL  W EYLDFE
Sbjct:  250 DQTYVREQFDKAIQTVGMEFRSDKLWEHYLHYEKESGNLRKLMAIYDQLLATPTQSYQQHFQNLKDFVSANAPQDILSEDEYAEIKDATKEA--PAEDSEEAPAETEAQGDIDAKIRDKIVERRTEVHKKTEEEIVARWPFEEAIKRPYFHVKPLEKGQLKMWKEYLDFE 417
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BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A2I4F6F0_JUGRE (pre-mRNA-processing factor 39-like isoform X2 n=28 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4F6F0_JUGRE)

HSP 1 Score: 75.5 bits (184), Expect = 2.050e-12
Identity = 57/177 (32.20%), Postives = 82/177 (46.33%), Query Frame = 1 
Query:   22 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKL-AASAREGAAPAAKEAGLQTEDNEVLCDVSAQE------GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 531
            D   IRR+F+R L  VG    S  LW + + +E  Q +  R    Y   L +    L+  +   K+ +   P  ++  A     AA    E G+QT + EV  D + Q       GLT+ E   + + V E   K +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  267 DPDTIRRLFERGLAYVGTDYLSFTLWDKYIEYEYMQQEWGRLAMIYTRILEYPNQQLDRYFTSFKELVGSRPLSEIMTAEEAATAAGGLSEDGVQTNEGEVHPDATEQSPKPVSSGLTEAEELQKYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHSYLDFME 443
[Close]
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A6A1VAF0_9ROSI (Pre-mRNA-processing factor 39 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VAF0_9ROSI)

HSP 1 Score: 75.1 bits (183), Expect = 2.790e-12
Identity = 55/175 (31.43%), Postives = 81/175 (46.29%), Query Frame = 1 
Query:   22 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPAAKEAGLQTEDNEVLCDVSAQE-----GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 531
            D   +RR+F+R L  VG    S  LW + + +E  Q +  R    Y   L +    L+  +   K+     P  +L  +  E AA A  E  +QT + E   D + Q      GLT+ E   + + + E   K +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  266 DPDTVRRLFERGLAYVGTDYLSFTLWDKYIEYEYMQQEWGRLAMIYTRILEYPNQQLDRYFNSFKELAGSRPLSELRTA--EEAAAALSETSIQTNEGEFRPDATEQSKPVSAGLTEAEELQKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHSYLDFME 438
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BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: UPI00106C2C21 (pre-mRNA-processing factor 39-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C2C21)

HSP 1 Score: 74.3 bits (181), Expect = 4.990e-12
Identity = 61/191 (31.94%), Postives = 89/191 (46.60%), Query Frame = 1 
Query:   34 IRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGK-------LAASAREGAAP------------AAKEAGLQTEDNEVLCDVSAQEGLT-DPERKARVVKVLEAKRKV----SLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEEG 534
            +R +F+RA+ A G+   S  LW   + +E+ Q  L++    Y   L     +    W   +D ++  P  +       L   A  GAAP            AA E   + E  +   D   ++G   DPE  A   KV+ A+RKV    +  E  +R +FE  I+RP+FHVKPL+  QL  W +YLDFE G
Sbjct:  216 MRSLFERAITAAGEDFRSDKLWDAYIEWEKAQKQLQKVTALYDRVLNVPTQNYSKHWKKFQDHINMNPLEEVLTGEELLKLKAEAGAAPPGFTVDSDPAVGAAPEEEKKVESADTTEDTKGEDGKPEDPEANAIRKKVI-AQRKVIYDANETEVSKRWTFEEGIKRPYFHVKPLEKVQLKNWRDYLDFEVG 405
[Close]
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A2I4DL48_JUGRE (pre-mRNA-processing factor 39-like isoform X5 n=46 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4DL48_JUGRE)

HSP 1 Score: 74.3 bits (181), Expect = 5.120e-12
Identity = 56/178 (31.46%), Postives = 81/178 (45.51%), Query Frame = 1 
Query:   22 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPAA--KEAGLQTEDNEVLCDVSAQE------GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 531
            D   IRR+F+R L  VG    S  LW + + +E  Q +  R    Y   L +    L+  +   K+     P  +L  +    AA  A   EA +Q  + EV  D + Q       GLT+ E   + + + E   K +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  258 DPETIRRLFERGLAYVGTDYLSFTLWDKYIEYEYMQQEWGRLAMIYTRILEYPNQQLDRYFNSFKELAGSRPLSELRTAEEAAAAXXAALSEASVQANEGEVHPDATEQSPKLVSSGLTEAEELQKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHSYLDFME 435
[Close]
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: UPI001CFEBF62 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFEBF62)

HSP 1 Score: 73.9 bits (180), Expect = 6.620e-12
Identity = 54/177 (30.51%), Postives = 86/177 (48.59%), Query Frame = 1 
Query:   22 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPAAKEAGLQ-------TEDNEVLCDVSAQEGLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 531
            DV+EIR +F+RAL+++G+   +  LW + + FE  Q +L      Y+ A+     DL L+W   KDFM +T   K  +S+  G+    +E+  Q           E +    A   L D     R    L  K+++     +R   FE  IRRP+FHV+P  + +L  +  Y++ EE
Sbjct:  134 DVSEIRALFERALQSIGNDYYARILWEKYIEFETSQDELENVVKLYKRAIQVPCRDLTLIWSQFKDFM-KTHTPKQESSSTTGSDGKEQESSQQILTVEQYAHTPEEMNAYKASNKLNDLTTYWRENLYLPTKKEL-----ERIRPFEDHIRRPYFHVQPFQEHELEHFRRYIENEE 304
[Close]
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A565AMN3_9BRAS (Uncharacterized protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565AMN3_9BRAS)

HSP 1 Score: 73.9 bits (180), Expect = 6.860e-12
Identity = 56/183 (30.60%), Postives = 85/183 (46.45%), Query Frame = 1 
Query:   22 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKL------AASAREGAAPAAKEAGLQTEDNEVLCDVSAQE-------GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 531
            D   IRR+F+RAL  VG    S  LW + + +E  Q D  R    Y   L   + + +  +   K+  +  P  +L      AA+A + +  A  E+  + ++ +   D S  +       G TDPE   + + V EA    +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  198 DPDTIRRLFERALVYVGTDFLSSTLWDKYIEYEYMQQDWSRLAMIYTRILENPIQNFDRYFSSFKELAETRPLSELRSAEESAAAAADASESAPSESSGKADEGKSQADGSTDQSPKLESAGSTDPEELKKYIGVREAMYIKAKEFESKIIGFEIAIRRPYFHVRPLNVAELENWHSYLDFVE 380
[Close]
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Match: A0A6P4AYP6_ZIZJJ (pre-mRNA-processing factor 39 isoform X1 n=7 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4AYP6_ZIZJJ)

HSP 1 Score: 73.9 bits (180), Expect = 6.970e-12
Identity = 59/178 (33.15%), Postives = 82/178 (46.07%), Query Frame = 1 
Query:   22 DVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAFDHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPA--AKEAGLQTEDNEVLCDVSAQE------GLTDPERKARVVKVLEAKRKVSLRERDRRESFECRIRRPHFHVKPLDDAQLMAWSEYLDFEE 531
            D   +RR F+R L  VG    S  LW + + +E  Q +  R    Y   L      L+  +   K+     P  +L  SA E AA A  + EAG Q  + EV  D + Q       GLT+ E   + + + E   K +     +   FE  IRRP+FHV+PL+ A+L  W  YLDF E
Sbjct:  266 DPDTVRRFFERGLAYVGTDYLSSSLWDKYIEYEYMQQEWGRLALIYTRILENPNQQLDRYFNSFKELAGNRPLSELK-SAEEAAAAAGTSSEAGDQVNEGEVQPDAADQSPKPVSAGLTEAEELEKYIGIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHNYLDFME 442
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig284.7749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR95_ECTSI3.260e-4648.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A078G0R1_BRANA1.500e-1229.73BnaC05g02260D protein n=12 Tax=Brassiceae TaxID=98... [more]
A0A8J2P8S4_9HEXA1.500e-1232.35Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A2I4F6F0_JUGRE2.050e-1232.20pre-mRNA-processing factor 39-like isoform X2 n=28... [more]
A0A6A1VAF0_9ROSI2.790e-1231.43Pre-mRNA-processing factor 39 n=1 Tax=Morella rubr... [more]
UPI00106C2C214.990e-1231.94pre-mRNA-processing factor 39-like isoform X1 n=2 ... [more]
A0A2I4DL48_JUGRE5.120e-1231.46pre-mRNA-processing factor 39-like isoform X5 n=46... [more]
UPI001CFEBF626.620e-1230.51uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A565AMN3_9BRAS6.860e-1230.60Uncharacterized protein n=1 Tax=Arabis nemorensis ... [more]
A0A6P4AYP6_ZIZJJ6.970e-1233.15pre-mRNA-processing factor 39 isoform X1 n=7 Tax=Z... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig284contigH-paniculata_contig284:36276..42383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score172.9
Seed ortholog evalue1.5e-40
Seed eggNOG ortholog2880.D8LR95
KEGG koko:K13217,ko:K20123
Hectar predicted targeting categoryother localisation
EggNOG free text desc.mRNA 5'-splice site recognition
EggNOG OGsKOG1258@1,KOG1258@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041,ko04131
Exons5
Model size599
Cds size597
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig284.7749.1prot_H-paniculata_contig284.7749.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig284 36276..42383 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929862.2292273-CDS-H-paniculata_contig284:36275..363161622929862.2292273-CDS-H-paniculata_contig284:36275..36316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig284 36276..36316 +
1691481044.3263009-CDS-H-paniculata_contig284:36275..363161691481044.3263009-CDS-H-paniculata_contig284:36275..36316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig284 36276..36316 +
1622929862.2442074-CDS-H-paniculata_contig284:38353..384411622929862.2442074-CDS-H-paniculata_contig284:38353..38441Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig284 38354..38441 +
1691481044.3405473-CDS-H-paniculata_contig284:38353..384411691481044.3405473-CDS-H-paniculata_contig284:38353..38441Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig284 38354..38441 +
1622929862.2575996-CDS-H-paniculata_contig284:39690..398431622929862.2575996-CDS-H-paniculata_contig284:39690..39843Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig284 39691..39843 +
1691481044.3505518-CDS-H-paniculata_contig284:39690..398431691481044.3505518-CDS-H-paniculata_contig284:39690..39843Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig284 39691..39843 +
1622929862.2685332-CDS-H-paniculata_contig284:40832..409551622929862.2685332-CDS-H-paniculata_contig284:40832..40955Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig284 40833..40955 +
1691481044.3589509-CDS-H-paniculata_contig284:40832..409551691481044.3589509-CDS-H-paniculata_contig284:40832..40955Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig284 40833..40955 +
1622929862.2824605-CDS-H-paniculata_contig284:42191..423831622929862.2824605-CDS-H-paniculata_contig284:42191..42383Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig284 42192..42383 +
1691481044.367526-CDS-H-paniculata_contig284:42191..423831691481044.367526-CDS-H-paniculata_contig284:42191..42383Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig284 42192..42383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig284.7749.1

>prot_H-paniculata_contig284.7749.1 ID=prot_H-paniculata_contig284.7749.1|Name=mRNA_H-paniculata_contig284.7749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
SGGSINVDVAEIRRVFDRALEAVGDHPASGGLWRRCVAFEEGQGDLRRAF
DHYRVALGFRLPDLELLWMDLKDFMDRTPWGKLAASAREGAAPAAKEAGL
QTEDNEVLCDVSAQEGLTDPERKARVVKVLEAKRKVSLRERDRRESFECR
IRRPHFHVKPLDDAQLMAWSEYLDFEEGQASAVGGRGGGARKRARDDGG
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mRNA from alignment at H-paniculata_contig284:36276..42383+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig284.7749.1 ID=mRNA_H-paniculata_contig284.7749.1|Name=mRNA_H-paniculata_contig284.7749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6108bp|location=Sequence derived from alignment at H-paniculata_contig284:36276..42383+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGGGGGGTAGTATTAACGTAGACGTGGCAGAAATTCGAAGGTGGGTGGC
ATCAGCCGTATGGATGATTTCATTTTTGGGTCTTGCTTTTCGTGCAGGTA
TTTTTAGAATCATTCGTTGGTAGGGGGGGGGGGGGGGGGGGTGAGGTAGC
GAGCAAGGCAGATGTGAGAAATGTGGGAAGGTGAGGGGACGACAGCAGTA
TATCTGTTGTGATTCTGTGATTATACTTCGAAGTATGCGTCATGTTGTTG
AGCGCAAAAAGCGATCCTTTCTGCTTGTACTGAAGGCGTAGGTCGTTGTG
CTTGGGTCATCGCATTGTACTTTCGTGAGCCTGGTTCGAGATATGTAATC
AGGTGCTTTTTCCGGGACTAGCGATGCAAGGCGGTTGAGTTTTGTTACTT
CCCGAGGGTTAAATTCATGCTCTTTTGAAGTAGATGGTTTGTGAAATCGC
GTGTTGGCGATCAAATGGGTCAGGTTCCAATAATCAGCTGCGCTTTTTTG
TAGAATTTTGAAGTCACTGCTAGAATGTTGAAGTCAGCGATGTCAAGGCG
TCTTTTGAAAAGCGGCCCGGCTGACACATGTACAATATATATATATATAT
CATTTTAGAAAGCTTCATAGTATACATGAAAATCTGGGCTGCAGCGCTGC
GTTGATTTTTTTTCGATGTATCTAAATCACCGCGTCCGAGTCTGCAGAAT
GAATACAATTAAATGGCGCATACATACAATATATATTAAACAGAACGTAC
AATGATTCATCATGAAGTTTGTGAGTAGGAGTGATGTAAGCTAAACTAGT
TTTGAGGGGTTGTATTGACTGGTAGCGAGGTTATTCTCCAATTTCAGTAT
TCAAAGCGCTTTCGTTCGTACTTCCTTGGTTTCACGGAATTTGGTTCGGA
GTTGGTAGGAGTAATTCACAGATTTGATGTCTAAAGAAGTGAAGGTCATT
GTCCATTGGAGGCTTTGCGACAGTGTGAAAATGTGGGAATGGTATTTCAT
GTGTTGCAATAATAGGCATAATTCCCCACACCAGTCAGTGTAGTACGATC
TTTGCGGATACCTCAGGTACTAGCGAATTTGCTTTGTACAGTGCAGAATC
CCCAAGTGTTTCAGACCTGAATGAACAGGTCTAATTGATCGCACCTGGTA
CACACACTTCGGAGGGGCCGGATTGGTCGCGGTTCGCACAGATGGACGGA
TCGGTGCAGGGATAAATCGTAACCGCAATGCATATACATGTTTTTTTCCC
CACCCGTAGCTGTATTTTGTCCGCATCATTGATCCGAAGGGAAGAGCGCC
CGGCTCATTTGGCACATGATCGTCTGCGATTGGTCCGCAGGCAGTCAACC
GGTTCGCATGGATGTTCGATGCTGTTGTTGTTTTTGTTTTTGTTTTTGTT
TTTGTTTTTGTTTTTGGTGTACATGCTGGGAAGTAGGGGGTGAACGTGTA
TGTATCACATGCCGGATTCGAAAGCGTCTCATTCATTGTAGCTACGTAGT
GTTTGCCTTGTTTGTGGAAGGTTTGCTCCACGCCAAATCGGCGACGGAAA
AACAACGGTATTCACGTTCTATTCTCTGCCTTAGACGCGGCAAGTTTTAC
TTCACACGTCGAAGAACTTCGTTGCCGCCCTGTCGAGTGCAAGGACTCTG
AGTGGACAACAATCGGCAGGAGCAGGGGGAAAGACCTGACAGACCATTGT
GGTTTTAGGTACATTCAGACACTCGTCAATTTTTAACGATGATGTGTATT
TATTTCTCCTTGGTTGCCGGCAGTATCAGAAGGGACACTTGCCTGAAAAA
TTAGAACAGACAGGGAGAAGGAGAGAGGCGTATTGCGATATATATATATA
TATATATATATATATATATGCGAGTACAGTACGTAGTTATTACGAAGACT
CGCGTGCCTTCTTTTAGGTAAAACAACATATTGCCCAAAATGCTAATAGG
ACCGGCAGTAACATCTTCTATAATCCCAATATTTGCGTGCTTTTCTGTTC
CACCTGATCTGATGTGACTGTGACTGTGGCTATGGCCACCTTTTCTCGTT
GTTTGTATCTCCTGTGTGGTGCGGATAGGGTGTTCGATCGTGCGTTGGAA
GCGGTGGGGGACCATCCGGCATCGGGCGGCCTCTGGCGAAGATGCGTGGC
GTTCGAAGAGGGGCAGGTAAAATCAAACAGAAGAGAACAGGCGCGGCGTG
TGTATTGTAAAGGTGTAATGCGTGCCTGTGTCGTGTCGCGTAATACCACG
TTTTCAGGACTAATCCCAGTGGAATAGGTATGAATCTTGGTGTAATTATA
GGTAAAGTAGAGCATGACAACACCGGGCACTCACGCGACGAACAAAGGAG
CCCTTACTACATTATAACATGAAAGAGTTTTTCGACGCTGCATTTAGTGT
TGACGAGCATTCGTGCGTACTGTTCCATTCTTAGCGGGTGTAATGATCCA
CTGCGAGCGCAGCGAGTCGTCGTTCGCGGATCGACAACAAAACACTGGAG
TATGACCTAGGGCCGTAGTAGCCGTAGCTTACTATTTATTACAGTGTTAA
ATGTTAGTTCCTACGCCATAATCCCCCCAGAGTGATTGGTCATCTTGTGT
GTGATTTATGCTACGTCGACATTCACGACTCTTGAAAAGCTAGATCAGGA
GCGCGCGCGCGGGGTTACGCATCAGCTGCCAAGGGCGGCTTCACTAGGAG
GACGGCATTTACACACTATGAGGATAGGGTTTGGGAAATGTCTTATAGAG
CAAAGAGCAAGTCAAGACTACAAGCAGACATGCCTAAATTACTGTATGAT
AAAAAATATGACAATAATCGTAAAACAAAACGGAGGTACGCTCAGCATCT
TCAAGCTGCTGGACCAAACGAGAGGGTAACGTAAGCGGAAGCACCCCCCC
CCCCCCCCCCCGGAAAATTTGATATCATGTGTACTGTTGTGCAGCAACAT
TTTCATTGTGTATCTGTACGCTGGACTCGGCTATGATGGTGAGAGTATAA
TGTTTGTACCAATGTCGATATGTCGATACCGCGCATGTGCGAAAACTGCC
GAAGCAAAAACGCCATTGTTCAGTATTCACAACCTGCCACATAAACGAAG
GGGCATACACGATGGTAACGACAACTGCTCCCCATGGTTTACACATACGA
ATACAGTATCCATCCATCCTTTCATGCGCTCTGCCGAATACTACATACCT
AAAACCTAAGCCCTCCCCCCGCGCTCCGATAGGAACAAAGCCCCATCCAT
AGAAGACGCGTGGTTGGTCTAACAGCTATGACATGCAAAACATGAGTCCC
TCCCTCCCCGCCGTTTTATGTACCCTCCCGATATTTGAATTGTGATGCCG
AGCGGCCTGCAACACTGTGATACTCCACACCCCGTCACACCCCACCCGCT
CGGTTCGTGGCGCAGGGCGACCTTCGAAGGGCTTTTGACCATTACAGGGT
CGCGCTTGGTTTTCGCCTACCGGACTTGGAGCTCCTGTGGATGGACCTGA
AGGACTTCATGGACCGGACGCCTTGGGGAAAACTCGCGGCGTCGGCTCGA
GAGGGGGCTGCTCCGGCGGTGAGCTGGCTGCAGTAGTAAGCTTAGGGAGT
GAAGGCTGATGCGGTAGAGCGAGTGTGGGTTTCACCCCTTCTAGTGATTA
CTGCTGCTGTTCCCCGCCCCTGCGCCCACACTTGGTAGGTTCGGACCGAG
AGAAGGGTGCGTTGCAGTCGTCAGGACTAGAACACGAACACTACCAAAGA
GAAATACGTTTTGCACGCCAATTTTTCGCACCGTTCTTTTTGTTTTTTTA
TTTTGTGTATGGAAGGGAAGGCCTACGTTGGTGGTGTTATTCGTTTGTTT
AGTTACTTGACGTGGTTGGAAGTGGACGACGTACACGAATCAAGGTGCAG
CGGGCTCTGTGCCTCATGTGAAGCACTCCGGGGATTGTCAAGGGTATCCC
CTACGTAGACGACAATATACCGCAGCGCGCTGTAAAGGTGGCGCATCGAA
GCTCTCTCTGTTAGACGAGTGATTCGTTTTGATTGGGTTTTCGCTATTGC
AAGCATCGTGTGTTTGCGTGGTTTTGCATGAGCTTTTTCTCCGTCCCCCT
GTAGTACGGAAGGGAGTGAGGCGATCGAGTGAGGTTTGTGTAAATAAGAT
GGTAAGTTTCAGCCCGGAGTGTTTTGCGCTAGACAGGAAGGAAAGCGATG
ACATGTTGACAACATCTGTCACGGGGTATCTGGTGGGGTGTTCAGGGAAT
AGTTTTCACGTCCTTAACGTAGCCAACCCGGGGATCTGACAATCCGCTGA
CACAGGTGTTGCCTTCAAAGCGTTTGGTCTGTTCGGTCATGTTTAAATAA
AGATGTCAATATATTTCATGAGAGTAGACGTCTGCCTCGTGCACTGAAAT
TCAATTTGCAAGCTCACCTTTGGGTTTGCACTATTGGCCCATCTGTATTC
CAACGACAGCTGACTGCGACTCTCAACCTTTCTCAATGCATGCTTTGTAC
TACCCCCCTGTTATCTGTTACACCCCCCCCGCCTCTTGGCATACCCGCGT
TTGTCAGGCCAAGGAGGCAGGGTTGCAAACCGAAGACAACGAAGTGCTCT
GCGACGTGTCGGCACAGGAGGGACTGACTGACCCAGAACGAAAGGCGCGA
GTCGTGAAAGTGCTCGAGGCGAAGAGGAAGGCAAGCAATGGCGCGTGTGT
CTTGTCATAATCCAGTGTATTTGTCATGATGGGTAACAACACAAGACAAC
TAAAATATACCCGTGTGAAACGTTGTTTTTGTTGTTGGGCACAAAACGCC
CTCAACAGTTGTACTTCCGAGGCGAACTTGACAACTGTGCACACAAGAGT
CACACATCGGGCCCTTGCGGCATTTTTACATCCATTTTCAACTATAACCT
CTTCAGCGCCAGATGACCAATTTGCTTTTGTTGGCGTTTTCCCCTTTCAT
TTTCTTTTGCCAGTACATTCAAACAGCTGTCAACTACGGAACATGACCAT
GGCTTTTCGCTACTCGTAGGAGGTTTATTATTCTGATCTGTTTATTTATT
ACACGTATGTAAATATTTGGGTAACGTAACAATTGGATACGCCCAAAAAC
CGGAAACAACGACTGTCGGCGCACCGGGCTTTCCCAGCTGGCGGTAAACC
TCCAATTGGGCACACACAAAGGACCACCAGTTCGTTGGCGTGTGATACAA
TGAAAGTATACTACTATTCAACATTCAACAATCTGGTTTGTTGTTTGTTG
CGTCTGTGCCGCGTTCGGGCACATCTATCGCTCTGCTTGATTGGGCAGTT
TTGTATCTACTCCGCCGGTGACCTTCGTTCGCCGATGGGAAATGAGAGGA
TTGCGTGTGTTTGTACACATCCATGAAATTTTCCAACACCATATAATATC
TGATGTCATATCGATAACCTCACTTGCTAATTTTTGTGCACCTTGTCTTT
TTTTTGCTGTTTGTGTTTTTATCATATGACCCCTTAGTGCTCTAATTTTG
CTGATAAGTGTAGTTTGCTGTAGTTTGAAGTCAACTACATACGAGATATG
GGTGCAGGGAATTTTATTATGCGAGCTTTAGAGCTATACTTCAACTGAAT
ATAGCAGGGTTGAGTTACGAATGACATATTTCGAGGGTATCTGTCGTTCA
GATGAAACGCTATTTCATGCGTGTTTTATCTAGAGTACACATGCGAGTGA
TACAATCATACCCCCCTGTGAAGGTTGCCGTAGCTACCCCGCAGAGGAAC
AAATAACTCTGTTCTGTAAAAGGAAATGTAGACGTACTTCGGTATGGAAG
CATCGGATAGAGGTTTTGGCCTTAGCCTTCCGGGGGTTAAAAACAAAAAA
ATGCCGTAGCTCATGTTGTGCGTGGCCGAATGGCGCCCCCCCGCTTTACA
TGCACATACTTAATAGGTATCCCTTAGAGAGCGTGACAGACGTGAGAGCT
TCGAGTGCCGAATAAGGCGACCGCATTTCCACGTCAAGCCCCTCGATGAT
GCGCAACTAATGGCGTGGTCGGAGTACCTAGACTTCGAGGAGGGGCAGGC
CTCGGCGGTAGGTGGGAGAGGCGGAGGGGCGCGGAAGCGAGCACGGGATG
ATGGCGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig284:36276..42383+

>mRNA_H-paniculata_contig284.7749.1 ID=mRNA_H-paniculata_contig284.7749.1|Name=mRNA_H-paniculata_contig284.7749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1194bp|location=Sequence derived from alignment at H-paniculata_contig284:36276..42383+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGGGGGGTAGTATTAACGTAGACGTGGCAGAAATTCGAAGTCGGGGGGT
AGTATTAACGTAGACGTGGCAGAAATTCGAAGGGTGTTCGATCGTGCGTT
GGAAGCGGTGGGGGACCATCCGGCATCGGGCGGCCTCTGGCGAAGATGCG
TGGCGTTCGAAGAGGGGCAGGGTGTTCGATCGTGCGTTGGAAGCGGTGGG
GGACCATCCGGCATCGGGCGGCCTCTGGCGAAGATGCGTGGCGTTCGAAG
AGGGGCAGGGCGACCTTCGAAGGGCTTTTGACCATTACAGGGTCGCGCTT
GGTTTTCGCCTACCGGACTTGGAGCTCCTGTGGATGGACCTGAAGGACTT
CATGGACCGGACGCCTTGGGGAAAACTCGCGGCGTCGGCTCGAGAGGGGG
CTGCTCCGGCGGGCGACCTTCGAAGGGCTTTTGACCATTACAGGGTCGCG
CTTGGTTTTCGCCTACCGGACTTGGAGCTCCTGTGGATGGACCTGAAGGA
CTTCATGGACCGGACGCCTTGGGGAAAACTCGCGGCGTCGGCTCGAGAGG
GGGCTGCTCCGGCGGCCAAGGAGGCAGGGTTGCAAACCGAAGACAACGAA
GTGCTCTGCGACGTGTCGGCACAGGAGGGACTGACTGACCCAGAACGAAA
GGCGCGAGTCGTGAAAGTGCTCGAGGCGAAGAGGAAGGCCAAGGAGGCAG
GGTTGCAAACCGAAGACAACGAAGTGCTCTGCGACGTGTCGGCACAGGAG
GGACTGACTGACCCAGAACGAAAGGCGCGAGTCGTGAAAGTGCTCGAGGC
GAAGAGGAAGGTATCCCTTAGAGAGCGTGACAGACGTGAGAGCTTCGAGT
GCCGAATAAGGCGACCGCATTTCCACGTCAAGCCCCTCGATGATGCGCAA
CTAATGGCGTGGTCGGAGTACCTAGACTTCGAGGAGGGGCAGGCCTCGGC
GGTAGGTGGGAGAGGCGGAGGGGCGCGGAAGCGAGCACGGGATGATGGCG
GCGTATCCCTTAGAGAGCGTGACAGACGTGAGAGCTTCGAGTGCCGAATA
AGGCGACCGCATTTCCACGTCAAGCCCCTCGATGATGCGCAACTAATGGC
GTGGTCGGAGTACCTAGACTTCGAGGAGGGGCAGGCCTCGGCGGTAGGTG
GGAGAGGCGGAGGGGCGCGGAAGCGAGCACGGGATGATGGCGGC
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