prot_H-paniculata_contig284.7748.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig284.7748.1
Unique Nameprot_H-paniculata_contig284.7748.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length143
Homology
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Match: D8LR95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR95_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 2.810e-36
Identity = 84/167 (50.30%), Postives = 90/167 (53.89%), Query Frame = 0
Query:    9 QTPALQLLWQAVTSDPMDFQSWTALLSQVETVGSAEDACLAYDGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQ---------------------------------SPNAGGDAGGVGVISAREVFERGVSAAPFCLELWEAFVEYIM-EGGAEGPAAAV 141
            Q PALQ+LWQAVT DPMDFQ WTALLSQVE+VGS+ DA  AYD FLRQFPLCFGYWKKYANL R+HP P                                            SP A           A  V+ER VSAAPFCLELWEAFV  +M EGG  G    V
Sbjct:    7 QAPALQVLWQAVTFDPMDFQCWTALLSQVESVGSSADAHRAYDEFLRQFPLCFGYWKKYANLARKHPAPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLSPEA---------RRAHGVYERAVSAAPFCLELWEAFVGDVMGEGGGVGEEIGV 164          
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Match: A0A383WHJ6_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WHJ6_TETOB)

HSP 1 Score: 90.5 bits (223), Expect = 2.270e-18
Identity = 48/125 (38.40%), Postives = 64/125 (51.20%), Query Frame = 0
Query:   14 QLLWQAVTSDPMDFQSWTALLSQVETVGSAEDACLAYDGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQSPNAGGDAGGVGVISAREVFERGVSAAPFCLELWEAFVEYIMEGGAEGPA 138
            Q L++AVT  P DF +WT+L+S  E +   +    AYD FL +FPLC+GYWK+YA   RRH    AAA+                        V ERGV+A P+  ELW A+   ++   AE  A
Sbjct:   45 QELFKAVTEKPDDFNTWTSLISTAEKLDDVQHIRSAYDAFLAEFPLCYGYWKRYAEAERRHGSSEAAAA------------------------VLERGVAATPYSTELWVAYANLLLAADAETDA 145          
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Match: A0A7S0VQJ0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VQJ0_9CHLO)

HSP 1 Score: 89.7 bits (221), Expect = 4.040e-18
Identity = 46/118 (38.98%), Postives = 63/118 (53.39%), Query Frame = 0
Query:    9 QTPALQLLWQAVTSDPMDFQSWTALLSQVETVGSAEDACLAYDGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQSPNAGGDAGGVGVISAREVFERGVSAAPFCLELWEAFV 126
            +  A   LW +VTSDP DF SWTA L+ VE +   +     YD FL ++PLC+GYWKKYA+   +       A D                 V+ A E++ERGV+A P+ +ELW  +V
Sbjct:   20 EVEAFNQLWSSVTSDPSDFSSWTAALTAVEKLNDMDKLRSVYDAFLTEYPLCYGYWKKYADAEMK-------AQD-----------------VMHALEIYERGVTATPYSIELWGHYV 113          
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Match: A0A812EUJ8_SEPPH (PRPF39 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812EUJ8_SEPPH)

HSP 1 Score: 87.0 bits (214), Expect = 3.590e-17
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 0
Query:   13 LQLLWQAVTSDPMDFQSWTALLSQVETVGSAEDACLAYDGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQSPNAGGDAGGVGVISAREVFERGVSAAPFCLELWEAFVEYI 129
            L+  W+AV  +P DF  WT LL  VE   + EDA  A+D F   +P C+GYWKKYA++++++                   GD     V  A EVFERGV A P  +ELW  ++ Y+
Sbjct:   28 LEKYWKAVKDNPADFTGWTYLLQYVEQENNVEDAQEAFDAFFAHYPYCYGYWKKYADILKKN-------------------GD-----VEKAIEVFERGVKAIPLSVELWLHYISYV 120          
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Match: A0A2T7NYN5_POMCA (Suf domain-containing protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NYN5_POMCA)

HSP 1 Score: 86.7 bits (213), Expect = 4.850e-17
Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = 0
Query:   13 LQLLWQAVTSDPMDFQSWTALLSQVETVGSAEDACLAYDGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQSPNAGGDAGGVGVISAREVFERGVSAAPFCLELWEAFVEY 128
            L   W+AV  +PMDF  WT LL  VE  G  +   +AY+ F +++P C+GYWKKY+++ ++H                   GD     +I A EVFERG+ A P  ++LW  +V +
Sbjct:   47 LDKYWKAVKDNPMDFTGWTYLLQYVEQEGDEKTCSIAYEAFFQRYPYCYGYWKKYSDMFKKH-------------------GD-----LIKAAEVFERGLKAIPLSIDLWLHYVTF 138          
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Match: B7QNV8_IXOSC (Uncharacterized protein n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7QNV8_IXOSC)

HSP 1 Score: 83.2 bits (204), Expect = 6.480e-16
Identity = 40/124 (32.26%), Postives = 62/124 (50.00%), Query Frame = 0
Query:    6 DGLQTPALQLLWQAVTSDPMDFQSWTALLSQVETVGSAEDACLAYDGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQSPNAGGDAGGVGVISAREVFERGVSAAPFCLELWEAFVEYI 129
            +G ++P L+  WQ V ++P DF  WT LL  VE   +   A  A+D F   +P C+GYWKKYA++ ++H                          +  A E FERGV+A P  ++LW  ++ ++
Sbjct:   28 EGKESPELEKYWQVVRTNPADFTGWTYLLQFVEQENNLTAAREAFDKFFTYYPYCYGYWKKYADMEKKH------------------------CSIEKAEETFERGVAAIPLSVDLWIHYINFV 127          
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Match: V5IHY8_IXORI (Putative mrna processing protein n=2 Tax=Ixodes ricinus TaxID=34613 RepID=V5IHY8_IXORI)

HSP 1 Score: 83.2 bits (204), Expect = 7.490e-16
Identity = 40/124 (32.26%), Postives = 62/124 (50.00%), Query Frame = 0
Query:    6 DGLQTPALQLLWQAVTSDPMDFQSWTALLSQVETVGSAEDACLAYDGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQSPNAGGDAGGVGVISAREVFERGVSAAPFCLELWEAFVEYI 129
            +G ++P L+  WQ V ++P DF  WT LL  VE   +   A  A+D F   +P C+GYWKKYA++ ++H                          +  A E FERGV+A P  ++LW  ++ ++
Sbjct:   28 EGKESPELEKYWQVVRTNPADFTGWTYLLQFVEQENNLTAAREAFDKFFTYYPYCYGYWKKYADMEKKH------------------------CSIEKAEETFERGVAAIPLSVDLWIHYINFV 127          
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Match: A0A6P7UIT5_IXOSC (pre-mRNA-processing factor 39 isoform X1 n=12 Tax=Ixodes TaxID=6944 RepID=A0A6P7UIT5_IXOSC)

HSP 1 Score: 83.2 bits (204), Expect = 7.940e-16
Identity = 40/124 (32.26%), Postives = 62/124 (50.00%), Query Frame = 0
Query:    6 DGLQTPALQLLWQAVTSDPMDFQSWTALLSQVETVGSAEDACLAYDGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQSPNAGGDAGGVGVISAREVFERGVSAAPFCLELWEAFVEYI 129
            +G ++P L+  WQ V ++P DF  WT LL  VE   +   A  A+D F   +P C+GYWKKYA++ ++H                          +  A E FERGV+A P  ++LW  ++ ++
Sbjct:   28 EGKESPELEKYWQVVRTNPADFTGWTYLLQFVEQENNLTAAREAFDKFFTYYPYCYGYWKKYADMEKKH------------------------CSIEKAEETFERGVAAIPLSVDLWIHYINFV 127          
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Match: A0A6P7SAP6_OCTVU (pre-mRNA-processing factor 39 isoform X1 n=4 Tax=Octopus TaxID=6643 RepID=A0A6P7SAP6_OCTVU)

HSP 1 Score: 82.0 bits (201), Expect = 1.990e-15
Identity = 43/130 (33.08%), Postives = 63/130 (48.46%), Query Frame = 0
Query:    2 STSVDGLQTPALQLLWQAVTSDPMDFQSWTALLSQVETVGSAEDACLAYDGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQSPNAGGDAGGVGVISAREVFERGVSAAPFCLELWEAFVEYIME 131
            +T  D  +   L+  W+AV  +P DF  WT LL  VE   + EDA  A+D F   +P C+GYWKK+A++++++                          V  A  VFERGV A P  +ELW  ++  + E
Sbjct:   17 NTEKDDKKETELEKYWKAVKDNPADFTGWTYLLQYVEQENNVEDAQEAFDAFFDHYPYCYGYWKKFADILKKNDE------------------------VDKAITVFERGVKAIPLSVELWLHYISSVTE 122          
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Match: A0A150GXA9_GONPE (Suf domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GXA9_GONPE)

HSP 1 Score: 81.6 bits (200), Expect = 2.670e-15
Identity = 40/112 (35.71%), Postives = 55/112 (49.11%), Query Frame = 0
Query:   17 WQAVTSDPMDFQSWTALLSQVETVGSAEDACLAYDGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQSPNAGGDAGGVGVISAREVFERGVSAAPFCLELWEAFVEY 128
            W  V +DP DF +WT+LL+  E +   E    AYD FL ++PLC+GYWKKYA+   RH     AA                         V+ERGV+A P+  +LW  +  +
Sbjct:   40 WATVQADPQDFNTWTSLLTIAERLDDMEKVRAAYDAFLAEYPLCYGYWKKYADAEVRHQSTDMAA------------------------HVYERGVAATPYSADLWAHYAAF 127          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig284.7748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR95_ECTSI2.810e-3650.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A383WHJ6_TETOB2.270e-1838.40Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7S0VQJ0_9CHLO4.040e-1838.98Hypothetical protein (Fragment) n=1 Tax=Polytomell... [more]
A0A812EUJ8_SEPPH3.590e-1738.46PRPF39 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=... [more]
A0A2T7NYN5_POMCA4.850e-1736.21Suf domain-containing protein n=2 Tax=Pomacea cana... [more]
B7QNV8_IXOSC6.480e-1632.26Uncharacterized protein n=1 Tax=Ixodes scapularis ... [more]
V5IHY8_IXORI7.490e-1632.26Putative mrna processing protein n=2 Tax=Ixodes ri... [more]
A0A6P7UIT5_IXOSC7.940e-1632.26pre-mRNA-processing factor 39 isoform X1 n=12 Tax=... [more]
A0A6P7SAP6_OCTVU1.990e-1533.08pre-mRNA-processing factor 39 isoform X1 n=4 Tax=O... [more]
A0A150GXA9_GONPE2.670e-1535.71Suf domain-containing protein n=1 Tax=Gonium pecto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 99..131
e-value: 2.2
score: 17.3
coord: 41..73
e-value: 0.14
score: 21.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 18..141
e-value: 2.9E-16
score: 61.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 18..75
NoneNo IPR availablePANTHERPTHR17204PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDcoord: 9..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig284contigH-paniculata_contig284:28689..36269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig284.7748.1mRNA_H-paniculata_contig284.7748.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig284 28646..36269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig284.7748.1 ID=prot_H-paniculata_contig284.7748.1|Name=mRNA_H-paniculata_contig284.7748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
MSTSVDGLQTPALQLLWQAVTSDPMDFQSWTALLSQVETVGSAEDACLAY
DGFLRQFPLCFGYWKKYANLVRRHPVPRAAASDGAWKQSPNAGGDAGGVG
VISAREVFERGVSAAPFCLELWEAFVEYIMEGGAEGPAAAVLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR011990TPR-like_helical_dom_sf