prot_H-paniculata_contig28393.7745.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28393.7745.1
Unique Nameprot_H-paniculata_contig28393.7745.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 3.150e-63
Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 0
Query:    1 GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLSTATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 111
             +VYLQIPDY KVQTTID LHDSCRL +G+DDPSKGNQLLEVYGITIQL TATNN+ LMKEVYPK  DLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ
Sbjct:   68 AKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 178          
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 3.260e-62
Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 0
Query:    1 GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLSTATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 111
             +VYLQIPDY KVQTTID LHDSCRL +G+DDPSKGNQLLEVYGITIQL TATNN+ LMKEVYPK  DLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ
Sbjct:  160 AKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 270          
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Match: A0A6V1ITC2_HETAK (COP9 signalosome complex subunit 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ITC2_HETAK)

HSP 1 Score: 147 bits (371), Expect = 3.730e-40
Identity = 71/111 (63.96%), Postives = 85/111 (76.58%), Query Frame = 0
Query:    1 GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLSTATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 111
            G+V+LQ  DY  VQ  ID  H SC L DG DDP+KG  LLEVY + IQL TAT N+  M+EVYPK  +LNA+V DPRIMGVIRE+GGKM+M+ G W +AYNEFYEGFR++Q
Sbjct:  159 GRVHLQQEDYSGVQRVIDEAHRSCLLPDGSDDPAKGTSLLEVYALEIQLCTATRNAARMREVYPKTLNLNAAVADPRIMGVIREEGGKMHMAAGRWAEAYNEFYEGFRSHQ 269          
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Match: A0A7S2BKS2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKS2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.080e-39
Identity = 69/111 (62.16%), Postives = 83/111 (74.77%), Query Frame = 0
Query:    1 GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLSTATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 111
            G+ YLQ  DY +V   +  LH SC+L DG DDP+KG  LLEVY + IQL TAT +S+ MK++YPK  +LNA+V DPRIMGVIRE+GGKMYMS   W  AYNEFYEGFR +Q
Sbjct:  184 GKAYLQSKDYNQVNRIVQELHRSCQLPDGTDDPTKGTYLLEVYALEIQLCTATKSSSRMKQIYPKTLNLNAAVADPRIMGVIREEGGKMYMSESRWDDAYNEFYEGFRGFQ 294          
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Match: A0A7S2W4K8_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4K8_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.220e-36
Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 0
Query:    1 GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLSTATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 111
            G+  L   D  +V+  +  LH SCRL DG DDP+KG  LLEVY + IQL TAT ++  MK +YPK  +LNA+V DPRIMGVIRE+GGKMYM+ G W +AYNEFYEGFR YQ
Sbjct:  206 GKACLAAGDVAQVRKAVADLHASCRLPDGSDDPAKGTYLLEVYALEIQLCTATKDTARMKALYPKTLNLNAAVADPRIMGVIREEGGKMYMAEGRWNEAYNEFYEGFRGYQ 316          
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Match: A0A1W0ACK2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACK2_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.180e-35
Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 0
Query:    1 GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLSTATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 111
            G++YL++ DY  +   ++ LH SC+L DG DD +K   LL+VY + IQL TATNN+  MK +YPK   L+A++ DPRIMGVIRE+GGK+Y+S G W  AYNEF+E FRNYQ
Sbjct:  165 GKLYLELGDYAPLHKVLEELHASCKLPDGTDDMTKATSLLDVYCLEIQLCTATNNAAKMKTIYPKTLVLDAAISDPRIMGVIREEGGKLYLSEGQWNLAYNEFFESFRNYQ 275          
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Match: A0A7R9YB37_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB37_9STRA)

HSP 1 Score: 133 bits (335), Expect = 6.200e-35
Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 0
Query:    1 GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLSTATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 111
            G+V+L+  +Y +V      L ++CRL DG DD  KG+ LLE Y + IQL T T+N++ MKE+YPK   LNA+V DPRIMG+IRE+GGKM+M +G+W +AYNEFY  FRNYQ
Sbjct:  155 GRVHLEAKNYSRVAEIARELQEACRLPDGTDDLPKGSYLLEAYALEIQLCTQTHNTSRMKEIYPKTEALNAAVADPRIMGIIREEGGKMFMGLGSWSEAYNEFYAAFRNYQ 265          
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Match: A0A1V9Z146_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z146_9STRA)

HSP 1 Score: 133 bits (335), Expect = 7.830e-35
Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 0
Query:    1 GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLSTATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 111
            G++YL++ +Y  +   ++ L  SC+L DG DD SK   LL+VY + IQL TATN++  MK +YPK   L+A++ DPRIMGVIRE+GGKMYMS G W +AYNEF+E FRNYQ
Sbjct:  166 GKLYLELGEYANLHRVLEQLQASCKLADGSDDTSKATSLLDVYCLEIQLCTATNDTAKMKVLYPKTLGLDAAISDPRIMGVIREEGGKMYMSEGLWSEAYNEFFESFRNYQ 276          
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Match: A0A067CVR0_SAPPC (COP9 signalosome complex subunit 2 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVR0_SAPPC)

HSP 1 Score: 132 bits (332), Expect = 2.130e-34
Identity = 63/111 (56.76%), Postives = 81/111 (72.97%), Query Frame = 0
Query:    1 GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLSTATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 111
            G++YL++ DY  +   ++ LH SC+L DG DD SK   LL+VY + IQL TATN++  MK +YPK   L+A++ DPRIMGVIRE+GGKMYMS   W  AYNEF+E FRNYQ
Sbjct:  166 GKLYLELGDYAPLHRVLEELHASCKLPDGSDDTSKATSLLDVYCLEIQLCTATNDTKKMKVLYPKTLGLDAAISDPRIMGVIREEGGKMYMSESLWMDAYNEFFESFRNYQ 276          
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Match: A0A6G0XPC1_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPC1_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.090e-33
Identity = 61/111 (54.95%), Postives = 82/111 (73.87%), Query Frame = 0
Query:    1 GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLSTATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQ 111
            G++YL++ +Y  ++  +  LH +C+  DG+DD SK   LL+VY + IQL TATN++  MK +YPK  DL+A++ DPR MGVIRE+GGKMYMS G W  AYNEF+E FRNYQ
Sbjct:  169 GRLYLELGEYGHLKRVLTELHAACKTPDGQDDMSKATSLLDVYCLEIQLCTATNDAIKMKTLYPKTLDLDAAISDPRTMGVIREEGGKMYMSEGLWDLAYNEFFESFRNYQ 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28393.7745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR5_ECTSI3.150e-6389.19COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6H5JKQ1_9PHAE3.260e-6289.19COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6V1ITC2_HETAK3.730e-4063.96COP9 signalosome complex subunit 2 n=1 Tax=Heteros... [more]
A0A7S2BKS2_9STRA4.080e-3962.16COP9 signalosome complex subunit 2 n=1 Tax=Dictyoc... [more]
A0A7S2W4K8_9STRA2.220e-3660.36COP9 signalosome complex subunit 2 n=2 Tax=Rhizoch... [more]
A0A1W0ACK2_9STRA2.180e-3555.86COP9 signalosome complex subunit 2 n=1 Tax=Thraust... [more]
A0A7R9YB37_9STRA6.200e-3555.86COP9 signalosome complex subunit 2 n=1 Tax=Pinguio... [more]
A0A1V9Z146_9STRA7.830e-3555.86COP9 signalosome complex subunit 2 n=1 Tax=Achlya ... [more]
A0A067CVR0_SAPPC2.130e-3456.76COP9 signalosome complex subunit 2 n=2 Tax=Saprole... [more]
A0A6G0XPC1_9STRA1.090e-3354.95COP9 signalosome complex subunit 2 n=1 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.570coord: 1..111
e-value: 5.5E-21
score: 77.2
NoneNo IPR availablePANTHERPTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 2..111
IPR037750COP9 signalosome complex subunit 2PANTHERPTHR10678:SF3COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 2..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28393contigH-paniculata_contig28393:1716..2951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28393.7745.1mRNA_H-paniculata_contig28393.7745.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28393 1716..2951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28393.7745.1 ID=prot_H-paniculata_contig28393.7745.1|Name=mRNA_H-paniculata_contig28393.7745.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
GQVYLQIPDYPKVQTTIDALHDSCRLVDGRDDPSKGNQLLEVYGITIQLS
TATNNSTLMKEVYPKITDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAY
NEFYEGFRNYQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037750COPS2